Pre_GI: BLASTP Hits

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Query: NC_013315:1370000:1380832 Clostridium difficile CD196 chromosome, complete genome

Start: 1380832, End: 1381212, Length: 381

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:1378875:139060613906061390986381Clostridium difficile BI1, complete genomeribosome-binding factor A7e-67251
NC_019970:1343670:135106213510621351421360Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeribosome-binding factor A2e-30130
NC_016627:2799453:281620028162002816547348Clostridium clariflavum DSM 19732 chromosome, complete genomeribosome-binding factor A7e-30129
NC_020134:1173000:118242711824271182777351Clostridium stercorarium subsp. stercorarium DSM 8532, completeribosome-binding factor A8e-29125
NC_010520:2585014:261085326108532611215363Clostridium botulinum A3 str. Loch Maree, complete genomeribosome-binding factor A9e-29125
NC_008262:1835613:185091218509121851262351Clostridium perfringens SM101, complete genomeribosome-binding factor A2e-28124
NC_012563:2721658:272261027226102722972363Clostridium botulinum A2 str. Kyoto, complete genomeribosome-binding factor A2e-28124
NC_009495:2524000:254809925480992548461363Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeribosome-binding factor A2e-28124
NC_009697:2394826:242012224201222420484363Clostridium botulinum A str. ATCC 19397 chromosome, completeribosome-binding factor A2e-28124
NC_009698:2367171:239246723924672392829363Clostridium botulinum A str. Hall chromosome, complete genomeribosome-binding factor A2e-28124
NC_012658:2584355:260629526062952606657363Clostridium botulinum Ba4 str. 657 chromosome, complete genomeribosome-binding factor A2e-28124
NC_010516:2511035:253632225363222536684363Clostridium botulinum B1 str. Okra, complete genomeribosome-binding factor A2e-28124
NC_020291:1464500:147258414725841472934351Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeribosome-binding factor A1e-28124
NC_011898:513835:526895526895527248354Clostridium cellulolyticum H10, complete genomeribosome-binding factor A9e-27118
NC_014328:1405484:141450314145031414868366Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeribosome-binding factor A3e-24110
NC_014152:1430156:144493014449301445292363Thermincola sp. JR, complete genomeribosome-binding factor A3e-23107
NC_014657:944000:958401958401958802402Caldicellulosiruptor owensensis OL chromosome, complete genomeribosome-binding factor a5e-23106
NC_011830:3904034:390969439096943910071378Desulfitobacterium hafniense DCB-2, complete genomeribosome-binding factor A2e-22104
NC_007907:2879568:288240728824072882784378Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-22104
NC_009253:2139379:214653921465392146901363Desulfotomaculum reducens MI-1 chromosome, complete genomeribosome-binding factor A2e-22104
NC_009483:2201986:220643722064372206805369Geobacter uraniireducens Rf4 chromosome, complete genomeribosome-binding factor A2e-22104
NC_015589:1899329:191995519199551920317363Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeribosome-binding factor A3e-22103
NC_013216:3376186:338631833863183386677360Desulfotomaculum acetoxidans DSM 771, complete genomeribosome-binding factor A4e-21100
NC_010001:3369500:337667333766733377083411Clostridium phytofermentans ISDg, complete genomeribosome-binding factor A7e-2199.4
NC_014387:1175927:118944811894481189876429Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeribosome-binding factor A RbfA6e-2199.4
NC_017200:3655496:366588236658823666238357Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ribosome-binding factor A1e-2098.2
NC_011969:3549000:355615835561583556514357Bacillus cereus Q1 chromosome, complete genomeribosome-binding factor a1e-2098.2
NC_003909:3587695:359688335968833597239357Bacillus cereus ATCC 10987, complete genomeribosome-binding factor A1e-2098.2
NC_014103:3985897:399506039950603995425366Bacillus megaterium DSM319 chromosome, complete genomeribosome-binding factor A3e-2097.1
NC_011658:3603009:361219636121963612552357Bacillus cereus AH187 chromosome, complete genomeribosome-binding factor A3e-2097.1
NC_016771:3555506:356469335646933565049357Bacillus cereus NC7401, complete genomeribosome-binding factor A3e-2097.1
NC_011772:3787500:379458137945813794937357Bacillus cereus G9842, complete genomeribosome-binding factor A3e-2097.1
NC_010184:3675424:368290436829043683260357Bacillus weihenstephanensis KBAB4, complete genomeribosome-binding factor A3e-2097.1
NC_004722:3777907:378498037849803785336357Bacillus cereus ATCC 14579, complete genomeribosome-binding factor A3e-2097.1
NC_011725:3821789:382886538288653829221357Bacillus cereus B4264 chromosome, complete genomeribosome-binding factor A3e-2097.1
NC_014171:3701051:370812537081253708481357Bacillus thuringiensis BMB171 chromosome, complete genomeribosome-binding factor A3e-2097.1
NC_017208:3816753:382421538242153824571357Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeribosome-binding factor A3e-2097.1
NC_011773:3651963:365903636590363659392357Bacillus cereus AH820 chromosome, complete genomeribosome-binding factor A4e-2096.7
NC_012472:3661912:366898536689853669341357Bacillus cereus 03BB102, complete genomeribosome-binding factor A4e-2096.7
NC_006274:3697255:370470537047053705061357Bacillus cereus E33L, complete genomeribosome-binding factor A4e-2096.7
NC_005957:3638750:364582336458233646179357Bacillus thuringiensis serovar konkukian str. 97-27, completeribosome-binding factor A4e-2096.7
NC_014335:3567931:357500435750043575360357Bacillus cereus biovar anthracis str. CI chromosome, completeribosome-binding factor A4e-2096.7
NC_008600:3643905:365097836509783651334357Bacillus thuringiensis str. Al Hakam, complete genomeribosome-binding factor A4e-2096.7
NC_016779:3579743:358681635868163587172357Bacillus cereus F837/76 chromosome, complete genomeRibosome-binding factor A4e-2096.7
NC_014098:1553900:155354415535441553903360Bacillus tusciae DSM 2912 chromosome, complete genomeribosome-binding factor A4e-2096.7
NC_005945:3615623:362484736248473625203357Bacillus anthracis str. Sterne, complete genomeribosome-binding factor A5e-2096.3
NC_003997:3617000:362415236241523624508357Bacillus anthracis str. Ames, complete genomeribosome-binding factor A5e-2096.3
NC_007530:3616828:362427936242793624635357Bacillus anthracis str. 'Ames Ancestor', complete genomeribosome-binding factor A5e-2096.3
NC_012659:3617000:362417936241793624535357Bacillus anthracis str. A0248, complete genomeribosome-binding factor A5e-2096.3
NC_009674:2551759:255888025588802559236357Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeribosome-binding factor A7e-2095.9
NC_014376:3214222:322095932209593221321363Clostridium saccharolyticum WM1 chromosome, complete genomeribosome-binding factor A9e-1992
NC_002528:404545:415223415223415585363Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeribosome-binding factor A1e-1891.7
NC_012880:3915500:391701339170133917411399Dickeya dadantii Ech703, complete genomeribosome-binding factor A3e-1890.5
NC_004461:921364:951699951699952049351Staphylococcus epidermidis ATCC 12228, complete genomeribosome-binding factor A5e-1889.7
NC_012121:897866:915362915362915709348Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative ribosome-binding factor A6e-1889.4
NC_021150:4311902:431882743188274319216390Azotobacter vinelandii CA6, complete genomeribosome-binding factor A6e-1786.3
NC_012560:4311906:431883143188314319220390Azotobacter vinelandii DJ, complete genomeribosome-binding factor A6e-1786.3
NC_004129:957890:976043976043976444402Pseudomonas fluorescens Pf-5, complete genomeribosome-binding factor A1e-1685.1
NC_014218:696409:699758699758700246489Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosome-binding factor A1e-1685.1
NC_013861:311908:331330331330331695366Legionella longbeachae NSW150, complete genomeRibosome-binding factor A1e-1685.1
NC_017353:1699652:170622417062241706571348Staphylococcus lugdunensis N920143, complete genomeputative ribosome-binding factor A1e-1684.7
NC_004459:1679335:168215816821581682553396Vibrio vulnificus CMCP6 chromosome I, complete sequenceribosome-binding factor A3e-1684
NC_014965:670115:674450674450674845396Vibrio vulnificus MO6-24/O chromosome I, complete sequenceribosome-binding factor A3e-1684
NC_017341:1291583:130519813051981305590393Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,ribosome-binding factor A (P15B PROTEIN)4e-1683.6
NC_017338:1234077:124542512454251245775351Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeribosome-binding factor A (P15B PROTEIN)4e-1683.6
NC_009782:1327340:134099713409971341347351Staphylococcus aureus subsp. aureus Mu3, complete genomeribosome-binding factor A4e-1683.6
NC_002952:1291444:130510213051021305452351Staphylococcus aureus subsp. aureus MRSA252, complete genomeribosome-binding factor A4e-1683.6
NC_007622:1214629:122828712282871228637351Staphylococcus aureus RF122, complete genomeribosome-binding factor A4e-1683.6
NC_005139:2731623:274573327457332746179447Vibrio vulnificus YJ016 chromosome I, complete sequenceribosome-binding factor A4e-1683.6
NC_007645:1245927:125429212542921254699408Hahella chejuensis KCTC 2396, complete genomeribosome-binding factor A5e-1683.2
NC_021175:1597613:161702316170231617373351Streptococcus oligofermentans AS 1.3089, complete genomeribosome-binding factor A5e-1682.8
NC_009009:1876367:189090518909051891255351Streptococcus sanguinis SK36, complete genomeRibosome-binding factor A, putative7e-1682.4
NC_011295:847903:849080849080849493414Coprothermobacter proteolyticus DSM 5265, complete genomeribosome-binding factor A1e-1581.6
NC_019435:747162:768930768930769289360Lactococcus lactis subsp. cremoris UC509.9, complete genomeribosome-binding factor A3e-1580.5
NC_008527:740060:761825761825762184360Lactococcus lactis subsp. cremoris SK11, complete genomeRibosome-binding factor A3e-1580.5
NC_017259:388000:397892397892398251360Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,ribosome-binding factor A3e-1580.1
NC_016632:74569:843838438384793411Serratia symbiotica str. 'Cinara cedri' chromosome, completeribosome-binding factor A3e-1580.1
NC_017505:1338661:134487613448761345247372Neisseria meningitidis alpha710 chromosome, complete genomeribosomal-binding factor A4e-1580.1
NC_006369:3058000:306698330669833067354372Legionella pneumophila str. Lens, complete genomeRibosome-binding factor A4e-1580.1
NC_011999:936500:946062946062946406345Macrococcus caseolyticus JCSC5402, complete genomeribosome-binding factor A6e-1579.7
NC_011035:1033942:103821310382131038584372Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeribosome-binding factor A6e-1579.7
NC_013016:1257942:126421012642101264581372Neisseria meningitidis alpha14 chromosome, complete genomeribosome-binding factor A5e-1579.7
NC_016603:3475843:348437734843773484778402Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeribosome-binding factor A7e-1579
NC_002946:618439:634076634076634447372Neisseria gonorrhoeae FA 1090, complete genomeribosome-binding factor A8e-1579
NC_017511:950411:954043954043954414372Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeribosome-binding factor A8e-1579
NC_017517:1377617:138189313818931382264372Neisseria meningitidis M01-240355 chromosome, complete genomeribosome-binding factor A1e-1478.6
NC_017512:1264542:126813912681391268510372Neisseria meningitidis WUE 2594, complete genomeribosome-binding factor A1e-1478.6
NC_003116:1488576:149217314921731492544372Neisseria meningitidis Z2491, complete genomeribosome-binding factor A1e-1478.6
NC_015696:517941:546773546773547204432Francisella sp. TX077308 chromosome, complete genomeribosome-binding factor A2e-1477.8
NC_017516:917817:932901932901933272372Neisseria meningitidis H44/76 chromosome, complete genomeribosome-binding factor A2e-1477.4
NC_013939:1535071:154394815439481544295348Deferribacter desulfuricans SSM1, complete genomeribosome-binding factor A4e-1476.6
NC_015318:706374:718307718307718708402Hippea maritima DSM 10411 chromosome, complete genomeRibosome-binding factor A1e-1375.5
NC_014909:86000:120346120346120714369Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeribosome-binding factor A1e-1375.1
NC_010336:996661:102532410253241025755432Francisella philomiragia subsp. philomiragia ATCC 25017, completeribosome-binding factor A2e-1374.3
NC_008601:1733940:177265817726581773089432Francisella tularensis subsp. novicida U112, complete genomeribosome-binding factor A2e-1373.9
NC_015672:1566565:157549715754971575859363Flexistipes sinusarabici DSM 4947 chromosome, complete genomeribosome-binding factor A3e-1373.6
NC_009749:1699152:173705617370561737487432Francisella tularensis subsp. holarctica FTA, complete genomeribosome-binding factor A3e-1373.6
NC_010677:96470:125092125092125523432Francisella tularensis subsp. mediasiatica FSC147, complete genomeribosome-binding factor A3e-1373.6
NC_008245:24652:532595325953690432Francisella tularensis subsp. tularensis FSC 198, complete genomeRibosome-binding factor A3e-1373.6
NC_008369:1702885:174078917407891741220432Francisella tularensis subsp. holarctica OSU18, complete genomeribosome-binding factor A3e-1373.6
NC_007880:1703346:174115917411591741590432Francisella tularensis subsp. holarctica, complete genomeRibosome-binding factor A3e-1373.6
NC_006570:24636:532435324353674432Francisella tularensis subsp. tularensis Schu 4, complete genomeRibosome-binding factor A3e-1373.6
NC_009257:109528:138144138144138575432Francisella tularensis subsp. tularensis WY96-3418 chromosome,ribosome-binding factor A3e-1373.6
NC_016933:24654:532615326153692432Francisella tularensis TIGB03 chromosome, complete genomeRibosome-binding factor A3e-1373.6
NC_016937:24654:532615326153692432Francisella tularensis subsp. tularensis TI0902 chromosome,ribosome-binding factor A3e-1373.6
NC_010741:949732:968837968837969217381Treponema pallidum subsp. pallidum SS14, complete genomeribosome-binding factor A2e-1270.9
NC_000919:948287:967392967392967772381Treponema pallidum subsp. pallidum str. Nichols, complete genomeribosome-binding factor A (rbfA)2e-1270.9
NC_016844:950231:969336969336969716381Treponema pallidum subsp. pallidum DAL-1 chromosome, completeribosome-binding factor A2e-1270.9
NC_017268:949543:968648968648969028381Treponema pallidum subsp. pallidum str. Chicago chromosome,ribosome-binding factor A2e-1270.9
NC_021508:949769:968874968874969254381Treponema pallidum subsp. pallidum SS14, complete genomeribosome-binding factor A2e-1270.9
NC_004545:392685:396349396349396723375Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeribosome-binding factor A8e-1268.9
NC_008054:1117703:113319111331911133553363Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRibosome-binding factor A1e-1168.2
NC_014727:1292213:131076513107651311127363Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,ribosome-binding factor a1e-1168.2
NC_011728:832073:843138843138843500363Borrelia burgdorferi ZS7, complete genomeribosome-binding factor A2e-1168.2
NC_011527:525759:545092545092545451360Coxiella burnetii CbuG_Q212, complete genomeribosome-binding factor A4e-1166.6
NC_011528:535680:551729551729552088360Coxiella burnetii CbuK_Q154, complete genomeribosome-binding factor A5e-1166.2
NC_002971:1379567:138182813818281382187360Coxiella burnetii RSA 493, complete genomeribosome-binding factor A5e-1166.2
NC_010117:1461502:146240914624091462768360Coxiella burnetii RSA 331, complete genomeribosome-binding factor A5e-1166.2
NC_015064:3370840:338619033861903386618429Acidobacterium sp. MP5ACTX9 chromosome, complete genomeribosome-binding factor A3e-1063.9
NC_009465:29735:583015830158645345Candidatus Vesicomyosocius okutanii HA, complete genomeribosome-binding factor A3e-1063.9
NC_016893:563890:578339578339578692354Wigglesworthia glossinidia endosymbiont of Glossina morsitans30s ribosome binding factor4e-1063.2
NC_005061:96536:115697115697116050354Candidatus Blochmannia floridanus, complete genomeribosome-binding factor A (P15B protein)5e-1063.2
NC_011244:863306:871126871126871515390Borrelia recurrentis A1, complete genomeribosome-binding factor A1e-0962
NC_013517:2437574:245028124502812450643363Sebaldella termitidis ATCC 33386, complete genomeribosome-binding factor A2e-0961.6
NC_008025:1799106:180207818020781802368291Deinococcus geothermalis DSM 11300, complete genomeribosome-binding factor A2e-0961.2
NC_004344:257471:264696264696265073378Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein3e-0960.5
NC_013943:1381000:139257613925761392908333Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeribosome-binding factor A4e-0960.1
NC_013222:817686:822358822358822765408Robiginitalea biformata HTCC2501, complete genomeribosome-binding factor A2e-0857.8
NC_020156:1565500:158344415834441583839396Nonlabens dokdonensis DSW-6, complete genomeribosome-binding factor A3e-0857
NC_013947:1537275:153727515372751537712438Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeribosome-binding factor A5e-0856.6
NC_013170:917177:918174918174918530357Cryptobacterium curtum DSM 15641, complete genomeribosome-binding factor A5e-0856.6
NC_020075:114790:128230128230128589360Candidatus Blochmannia chromaiodes str. 640, complete genomeribosome-binding factor A1e-0755.1
NC_012985:465354:476229476229476615387Candidatus Liberibacter asiaticus str. psy62, complete genomeribosome-binding factor A2e-0754.7
NC_007799:555900:571590571590571934345Ehrlichia chaffeensis str. Arkansas, complete genomeribosome-binding factor A5e-0753.1
NC_020419:344000:355932355932356297366Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completeribosome-binding factor A1e-0652
NS_000191:344000:355932355932356297366Uncultured Termite group 1 bacterium phylotype Rs-D17, completeribosome-binding factor A1e-0652
NC_005295:796437:800773800773801120348Ehrlichia ruminantium str. Welgevonden, complete genomeputative ribosome-binding factor A6e-0649.7
NC_006832:776286:780622780622780969348Ehrlichia ruminantium str. Welgevonden, complete genomePutative Ribosome-binding factor A6e-0649.7
NC_014774:239865:247781247781248179399Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeribosome-binding factor A7e-0649.3
NC_015164:2859000:286559528655952865930336Bacteroides salanitronis DSM 18170 chromosome, complete genomeribosome-binding factor A7e-0649.3
NC_006831:772737:777070777070777417348Ehrlichia ruminantium str. Gardel, complete genomePutative Ribosome-binding factor A8e-0649.3