Pre_GI: BLASTN Hits

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Query: NC_013199:1150000 Lactobacillus rhamnosus Lc 705, complete genome

Start: 1150000, End: 1173992, Length: 23993

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_018704:645843*64584366848522643Amphibacillus xylanus NBRC 15112, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_018704:347948*34794837014822201Amphibacillus xylanus NBRC 15112, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011567:388358*38835841678028423Anoxybacillus flavithermus WK1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011567:2327870*2327870234959921730Anoxybacillus flavithermus WK1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011567:204772*20477222623221461Anoxybacillus flavithermus WK1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011567:139598*13959816123721640Anoxybacillus flavithermus WK1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014551:483773*48377350659922827Bacillus amyloliquefaciens DSM 7, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009725:496443*49644354991253470Bacillus amyloliquefaciens FZB42, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020272:3706722*3706722373604029319Bacillus amyloliquefaciens IT-45, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_019842:484933*48493354277857846Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,7e-1073.8BLASTN svgBLASTP svg
NC_020410:495184*49518454162646443Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete7e-1073.8BLASTN svgBLASTP svg
NC_020410:198000*19800022508227083Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete7e-1073.8BLASTN svgBLASTP svg
NC_007530:5197854*5197854521982221969Bacillus anthracis str. 'Ames Ancestor', complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003997:5200805*5200805522349422690Bacillus anthracis str. Ames, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_005945:5202176*5202176522486522690Bacillus anthracis str. Sterne, complete genome7e-1073.8BLASTN svgBLASTP svg
UCMB5137:276121*27612129641620296Bacillus atrophaeus UCMB-51377e-1073.8BLASTN svgBLASTP svg
NC_014829:178000*17800020009922100Bacillus cellulosilyticus DSM 2522 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012472:5239944*5239944525821718274Bacillus cereus 03BB102, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004722:5381208*5381208540929928092Bacillus cereus ATCC 14579, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014335:5165211*5165211518430019090Bacillus cereus biovar anthracis str. CI chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_006274:5267585*5267585529331825734Bacillus cereus E33L, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006582:4256915*4256915428739230478Bacillus clausii KSM-K16, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006582:883922*88392291459930678Bacillus clausii KSM-K16, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006270:568171*56817159638928219Bacillus licheniformis ATCC 14580, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006322:567987*56798759617928193Bacillus licheniformis ATCC 14580, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006270:4149004*4149004418759938596Bacillus licheniformis ATCC 14580, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006322:4149500*4149500418760938110Bacillus licheniformis ATCC 14580, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014219:567033*56703358681719785Bacillus selenitireducens MLS10 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014219:2931796*2931796295390522110Bacillus selenitireducens MLS10 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014976:2735423*2735423276136725945Bacillus subtilis BSn5 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014976:1174430*1174430119919524766Bacillus subtilis BSn5 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014479:509919*50991953986229944Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_016047:637778*63777866096423187Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_000964:521975*52197556193339959Bacillus subtilis subsp. subtilis str. 168, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_019896:3491000*3491000352473533736Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_020244:516993*51699355115334161Bacillus subtilis XF-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_005957:5203915*5203915522509921185Bacillus thuringiensis serovar konkukian str. 97-27, complete7e-1073.8BLASTN svgBLASTP svg
NC_004668:241352*24135226701725666Enterococcus faecalis V583, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004668:1010610*1010610103713326524Enterococcus faecalis V583, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010556:691498*69149871146719970Exiguobacterium sibiricum 255-15, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012673:2023297*2023297204277319477Exiguobacterium sp. AT1b, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012673:1540000*1540000156249622497Exiguobacterium sp. AT1b, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012673:2368971*2368971238860519635Exiguobacterium sp. AT1b, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020210:2969862*2969862300083330972Geobacillus sp. GHH01, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014915:3039639*3039639305859918961Geobacillus sp. Y412MC52 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008526:74500*7450011650442005Lactobacillus casei ATCC 334, complete genome1e-26129BLASTN svgBLASTP svg
NC_008526:250000*25000027159921600Lactobacillus casei ATCC 334, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014334:99000*9900012029021291Lactobacillus casei str. Zhang chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_014334:10392481039248106254923302Lactobacillus casei str. Zhang chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014334:58952658952661259823073Lactobacillus casei str. Zhang chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_010999:12452391245239126533120093Lactobacillus casei, complete genome01679BLASTN svgBLASTP svg
NC_010999:2450974*2450974247597425001Lactobacillus casei, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010999:1979989*1979989200135021362Lactobacillus casei, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010999:1381497*1381497140718925693Lactobacillus casei, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013198:298000*29800032013422135Lactobacillus rhamnosus GG, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_013198:24580802458080247900920930Lactobacillus rhamnosus GG, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_013198:10955911095591112961534025Lactobacillus rhamnosus GG, complete genome04988BLASTN svgBLASTP svg
NC_013198:51179551179553527023476Lactobacillus rhamnosus GG, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013199:1886271*1886271190783621566Lactobacillus rhamnosus Lc 705, complete genome2e-22115BLASTN svgBLASTP svg
NC_013199:1966334*1966334198922322890Lactobacillus rhamnosus Lc 705, complete genome6e-32147BLASTN svgBLASTP svg
NC_013199:1407742*1407742143009922358Lactobacillus rhamnosus Lc 705, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013199:23869242386924241111624193Lactobacillus rhamnosus Lc 705, complete genome2e-29139BLASTN svgBLASTP svg
NC_013199:24266862426686244660019915Lactobacillus rhamnosus Lc 705, complete genome2e-28135BLASTN svgBLASTP svg
NC_015930:18969*189693942820460Lactococcus garvieae ATCC 49156, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004193:950000*95000096959919600Oceanobacillus iheyensis HTE831, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004193:241480*24148026554624067Oceanobacillus iheyensis HTE831, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019968:8397*83973417325777Prevotella dentalis DSM 3688 chromosome 2, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_012891:1573435*1573435161025436820Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,3e-1281.8BLASTN svgBLASTP svg
NC_006086:1329915*1329915136127431360Streptococcus pyogenes MGAS10394, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015760:61345*613458629324949Streptococcus salivarius CCHSS3, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015760:343874*34387436486020987Streptococcus salivarius CCHSS3, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_006449:58436*584367815519720Streptococcus thermophilus CNRZ1066, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_006449:345396*34539636548520090Streptococcus thermophilus CNRZ1066, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_006448:59654*596548486525212Streptococcus thermophilus LMG 18311, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_006448:351998*35199837421022213Streptococcus thermophilus LMG 18311, complete genome3e-1281.8BLASTN svgBLASTP svg