Pre_GI: BLASTP Hits

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Query: NC_013199:845000:872841 Lactobacillus rhamnosus Lc 705, complete genome

Start: 872841, End: 877706, Length: 4866

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012984:520000:5400725400725439773906Lactobacillus plantarum JDM1, complete genometape measure protein5e-120433
NC_003212:2413824:2414652241465224194574806Listeria innocua Clip11262, complete genomehypothetical protein8e-84313
NC_009697:2558286:2564800256480025701125313Clostridium botulinum A str. ATCC 19397 chromosome, completeTP901 family phage tail tape measure protein7e-60233
NC_003030:2023751:2030415203041520358745460Clostridium acetobutylicum ATCC 824, complete genomeUncharacterized phage related protein1e-59233
NC_017295:2022085:2029822202982220352815460Clostridium acetobutylicum EA 2018 chromosome, complete genomehypothetical protein1e-59233
NC_015687:2025345:2032009203200920374685460Clostridium acetobutylicum DSM 1731 chromosome, complete genomephage-like protein1e-59233
NC_010516:2676746:2683232268323226885925361Clostridium botulinum B1 str. Okra, complete genomephage related protein2e-58229
NC_014328:303063:3750973750973778622766Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephage-like protein5e-54214
NC_020164:1677452:1683022168302216893486327Staphylococcus warneri SG1, complete genomeTP901 family prophage L54a1e-53213
NC_002953:998944:1010139101013910163396201Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein2e-52209
NC_017342:1765132:1776015177601517822396225Staphylococcus aureus subsp. aureus TCH60 chromosome, completeTP901 family prophage L54a2e-52209
NC_010079:1564327:1571316157131615775166201Staphylococcus aureus subsp. aureus USA300_TCH1516, completepossible bacteriophage tail protein2e-52209
NC_007793:1548477:1557369155736915635696201Staphylococcus aureus subsp. aureus USA300, complete genomephiSLT ORF2067-like protein, phage tail tape measure protein2e-52209
NC_002951:351029:3824233824233886236201Staphylococcus aureus subsp. aureus COL, complete genomeprophage L54a, tail tape meausure protein, TP901 family2e-52209
NC_009487:1097500:1105996110599611121966201Staphylococcus aureus subsp. aureus JH9 chromosome, completeTP901 family phage tail tape measure protein1e-52209
NC_009632:1097379:1105870110587011120706201Staphylococcus aureus subsp. aureus JH1 chromosome, completeTP901 family phage tail tape measure protein1e-52209
NC_007795:1466318:1473307147330714795076201Staphylococcus aureus subsp. aureus NCTC 8325, complete genomephage tail tape meausure protein, TP901 family, core region domain protein3e-52208
NC_017351:1564469:1570567157056715767436177Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage tail tape measure protein, TP901 family, core region3e-52208
NC_013450:2047000:2054069205406920602456177Staphylococcus aureus subsp. aureus ED98, complete genomephage tail tape measure protein3e-52208
NC_017337:321155:3510533510533541003048Staphylococcus aureus subsp. aureus ED133 chromosome, completePhage tail length tape-measure protein3e-52208
NC_002952:1592000:1601251160125116074516201Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein3e-52208
NC_003923:1533500:1540580154058015467806201Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein4e-52207
NC_012121:474144:4990024990025011072106Staphylococcus carnosus subsp. carnosus TM300, complete genometruncated phiSLT orf2067-like protein (fragment 1)4e-50201
NC_017190:871352:8752458752458810015757Bacillus amyloliquefaciens LL3 chromosome, complete genomephage tail tape measure protein4e-49197
NC_014551:865254:8911698911698969255757Bacillus amyloliquefaciens DSM 7, complete genomePhage tail tape measure protein4e-49197
NC_014925:1314570:1322187132218713277755589Staphylococcus pseudintermedius HKU10-03 chromosome, completePhage tail length tape-measure protein9e-49196
NC_013656:1549634:1556619155661915615384920Lactococcus lactis subsp. lactis KF147, complete genomephage tail tape measure protein2e-46188
NC_002662:1418970:1426015142601514309374923Lactococcus lactis subsp. lactis Il1403, complete genomeprophage pi3 protein 143e-46188
NC_014328:3434478:3442433344243334446282196Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephage protein5e-45184
NC_015428:1544728:1561197156119715667735577Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage tail tape measure protein, TP901 family7e-43177
NC_017351:2074000:2082686208268620873684683Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage tail tape measure protein, TP901 family, core region3e-40168
NC_007795:2034000:2044037204403720486894653Staphylococcus aureus subsp. aureus NCTC 8325, complete genometail length tape measure protein7e-40167
NC_002953:2032278:2038044203804420426934650Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein8e-40167
NC_003923:2053510:2058798205879820634474650Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein8e-40167
NC_021184:4493440:4505833450583345092613429Desulfotomaculum gibsoniae DSM 7213, complete genomephage tail tape measure protein, TP901 family2e-39166
NC_014727:1220869:1231439123143912370275589Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,tape measure protein tmp2e-39165
NC_014136:329484:3398763398763455095634Leuconostoc kimchii IMSNU11154 chromosome, complete genomeprophage pi3 protein 146e-39164
NC_018704:176088:2134732134732169463474Amphibacillus xylanus NBRC 15112, complete genomeputative phage tail tape measure protein3e-37158
NC_012563:2566500:2574440257444025774182979Clostridium botulinum A2 str. Kyoto, complete genomephage tail tape measure protein, TP901 family1e-36156
UCMB5137:140766:1407661407661452534488Bacillus atrophaeus UCMB-5137SPBc2 prophage-derived transglycosylase YomI7e-36154
NC_011772:2763863:2771523277152327754163894Bacillus cereus G9842, complete genomephage protein8e-36153
NC_004722:1804788:1844978184497818486253648Bacillus cereus ATCC 14579, complete genomePhage protein5e-35151
NC_009004:2055563:2072866207286620780135148Lactococcus lactis subsp. cremoris MG1363, complete genomephage tail component5e-35151
NC_010471:1081590:1089478108947810952915814Leuconostoc citreum KM20, complete genomePhage-related tail protein2e-34149
NC_014011:1139818:1139818113981811422502433Aminobacterium colombiense DSM 12261 chromosome, complete genomephage tail tape measure protein, TP901 family2e-34149
NC_006322:3418268:3440255344025534447214467Bacillus licheniformis ATCC 14580, complete genomehypothetical protein4e-34148
NC_015520:55710:7031070310729732664Mahella australiensis 50-1 BON chromosome, complete genomephage tail tape measure protein, TP901 family1e-33146
NC_009495:2479465:2486428248642824894092982Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein1e-33146
NC_011837:3226500:3254330325433032581573828Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-33144
NC_009706:3291330:3322828332282833266553828Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein6e-33144
NC_020272:1311932:1347047134704713515344488Bacillus amyloliquefaciens IT-45, complete genomephage tail like protein6e-32140
NC_019977:1189242:1215510121551012195294020Methanomethylovorans hollandica DSM 15978, complete genomephage tail tape measure protein, TP901 family1e-31140
NC_014297:1336773:1348451134845113510722622Halalkalicoccus jeotgali B3 chromosome, complete genomephage tail tape measure protein, TP901 family6e-30134
NC_015520:3060495:3071393307139330735612169Mahella australiensis 50-1 BON chromosome, complete genomephage tail tape measure protein, TP901 family6e-30134
NC_006270:3418097:3440082344008234438193738Bacillus licheniformis ATCC 14580, complete genomephage tail like protein2e-28129
NC_009633:2592000:2600654260065426030352382Alkaliphilus metalliredigens QYMF chromosome, complete genomeTP901 family phage tail tape measure protein4e-28128
NC_012779:3016327:3020718302071830235402823Edwardsiella ictaluri 93-146, complete genomephage tail tape measure protein, family, putative1e-27127
NC_017200:1137639:1144780114478011480313252Bacillus thuringiensis serovar finitimus YBT-020 chromosome,putative phage tail tape measure protein7e-28127
NC_011773:4141765:4150660415066041553094650Bacillus cereus AH820 chromosome, complete genomephage tail tape measure protein, family, core region6e-28127
NC_007613:1353500:1367514136751413703212808Shigella boydii Sb227, complete genomeputative tail protein1e-27126
NC_014479:1961692:1966181196618119700593879Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative phage tail tape measure protein5e-27124
NC_015425:1295261:1318682131868213212132532Clostridium botulinum BKT015925 chromosome, complete genomephage tail tape measure protein, TP901 family1e-24117
NC_015636:316994:3279043279043300872184Methanothermococcus okinawensis IH1 chromosome, complete genomephage tail tape measure protein, TP901 family2e-24115
NC_008593:1362218:1372464137246413750132550Clostridium novyi NT, complete genomephage tail tape meausure protein, TP901 family, putative2e-24115
NC_010674:2817651:2832137283213728351963060Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein3e-24115
NC_010516:2305110:2316579231657923191942616Clostridium botulinum B1 str. Okra, complete genomephage protein7e-24114
NC_015410:2351464:2384959238495923875112553Pseudomonas mendocina NK-01 chromosome, complete genomephage tail fiber protein3e-23112
NC_014724:1101950:1128097112809711335835487Lactobacillus amylovorus GRL 1112 chromosome, complete genomeSLT domain-containing protein2e-23112
NC_013766:679906:7027667027667069654200Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-23112
NC_014228:3022903:3028711302871130315002790Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein6e-23110
NC_014633:8500:2036720367220941728Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencephage tail tape measure protein, TP901 family1e-22110
NC_014624:1235818:1256606125660612605473942Eubacterium limosum KIST612 chromosome, complete genomephage-like protein1e-22109
NC_014915:2963500:2980959298095929819931035Geobacillus sp. Y412MC52 chromosome, complete genome3e-21105
NC_010382:3643288:3651220365122036538952676Lysinibacillus sphaericus C3-41, complete genomephage-related tail protein4e-21105
NC_014831:8965:3912439124422703147Thermaerobacter marianensis DSM 12885 chromosome, complete genomephage tail tape measure protein, TP901 family1e-20103
NC_009697:3110772:3114511311451131196555145Clostridium botulinum A str. ATCC 19397 chromosome, completeTP901 family phage tail tape measure protein8e-21103
NC_008022:556457:5580955580955620183924Streptococcus pyogenes MGAS10270, complete genomephage protein2e-20102
NC_008021:531730:5568185568185607413924Streptococcus pyogenes MGAS9429, complete genomephage protein2e-20102
NC_008024:572916:5752725752725791953924Streptococcus pyogenes MGAS10750, complete genomephage protein2e-20102
NC_009332:1269000:1279950127995012838733924Streptococcus pyogenes str. Manfredo chromosome, complete genomephage tail protein2e-20102
NC_004606:904323:9043239043239082463924Streptococcus pyogenes SSI-1, complete genomeputative phage-related tail protein2e-20102
NC_003485:602640:6046526046526085753924Streptococcus pyogenes MGAS8232, complete genomehypothetical protein2e-20102
NC_013407:529385:5385405385405407322193Methanocaldococcus vulcanius M7, complete genomephage tail tape measure protein, TP901 family4e-20101
NC_016077:1388775:1402182140218214050312850Acidaminococcus intestini RyC-MR95 chromosome, complete genomephage tail tape measure protein, TP901 family, core region domain-containing protein1e-19100
NC_016845:4077293:4080665408066540831062442Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative prophage tail length determinator9e-20100
NC_006155:2084669:2099162209916221015882427Yersinia pseudotuberculosis IP 32953, complete genomeputative bacteriophage P2 tail protein gpT7e-20100
NC_012471:781063:8095678095678132263660Streptococcus equi subsp. equi 4047, complete genomephage tail protein2e-1999.4
NC_009648:3803622:3805284380528438077222439Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage tail length determinator3e-1999
NC_014652:801653:8216578216578242812625Caldicellulosiruptor hydrothermalis 108 chromosome, completephage tail tape measure protein, tp901 family5e-1998.2
NC_020181:5130513:5167884516788451703252442Enterobacter aerogenes EA1509E, complete genomecorresponds to STY4603 from Accession AL513382: Salmonella typhi CT187e-1997.4
NC_007963:1552761:1569114156911415717472634Chromohalobacter salexigens DSM 3043, complete genomePhage tail tape measure protein TP901, core region5e-1894.7
NC_006086:987991:1002473100247310042481776Streptococcus pyogenes MGAS10394, complete genomeunknown phage protein3e-1792.4
NC_003485:316679:3186673186673227674101Streptococcus pyogenes MGAS8232, complete genomehypothetical protein1e-1690.1
NC_013791:875224:8792958792958814722178Bacillus pseudofirmus OF4 chromosome, complete genomeTP901 family phage tail tape measure protein1e-1690.1
NC_004070:772281:7734867734867775864101Streptococcus pyogenes MGAS315, complete genomehypothetical protein2e-1689.4
NC_004606:1107500:1119170111917011232884119Streptococcus pyogenes SSI-1, complete genomeputative tail protein, phage assocaited2e-1689.4
NC_014915:2963500:2975957297595729797093753Geobacillus sp. Y412MC52 chromosome, complete genometail tape measure protein TP901 core region protein3e-1689
NC_015519:2489728:2510052251005225123642313Tepidanaerobacter sp. Re1 chromosome, complete genometail tape measure protein TP901 core region5e-1688.2
NC_010397:235976:2395292395292435123984Mycobacterium abscessus chromosome Chromosome, complete sequencePutative phage tail tape measure protein TMP8e-1687.4
NC_010397:1751067:1794188179418817982014014Mycobacterium abscessus chromosome Chromosome, complete sequenceBacteriophage tape measure protein (TMP)2e-1586.3
NC_018604:758819:7706517706517741243474Brachyspira pilosicoli WesB complete genomephage tail tape measure protein2e-1483.2
NC_014150:2560475:2569954256995425734243471Brachyspira murdochii DSM 12563 chromosome, complete genomephage tail tape measure protein, TP901 family2e-1482.4
NC_014150:1936154:1945269194526919487393471Brachyspira murdochii DSM 12563 chromosome, complete genomephage tail tape measure protein, TP901 family3e-1482.4
NC_014150:1497381:1507380150738015108503471Brachyspira murdochii DSM 12563 chromosome, complete genomephage tail tape measure protein, TP901 family3e-1482.4
NC_013216:4404085:4411689441168944161254437Desulfotomaculum acetoxidans DSM 771, complete genomephage tail tape measure protein, TP901 family6e-1481.3
NC_015519:2489728:2513583251358325145991017Tepidanaerobacter sp. Re1 chromosome, complete genometail tape measure protein TP901 core region2e-1379.3
NC_009674:2985878:2996865299686529997922928Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeTP901 family phage tail tape measure protein3e-1379
NC_014330:1593000:1602391160239116058643474Brachyspira pilosicoli 95/1000 chromosome, complete genomephage tail tape measure protein4e-1378.6
NC_012658:2498087:2505620250562025115085889Clostridium botulinum Ba4 str. 657 chromosome, complete genomephage tail tape measure protein, family, core region4e-1378.6
NC_016799:198091:1980911980912042646174Corynebacterium diphtheriae 31A chromosome, complete genomeimmunity-specific protein Beta2417e-1377.8
NC_017297:2017000:2021963202196320254633501Clostridium botulinum F str. 230613 chromosome, complete genomephage tail tape measure protein, TP901 family1e-1277
NC_009699:2017329:2021858202185820253583501Clostridium botulinum F str. Langeland chromosome, complete genomeTP901 family phage tail tape measure protein1e-1277
NC_018607:2010500:2021058202105820245313474Brachyspira pilosicoli B2904 chromosome, complete genomephage tail tape measure protein1e-1277
NC_007778:3784104:3789946378994637925222577Rhodopseudomonas palustris HaA2, complete genomePhage tail tape measure protein1e-1276.6
NC_019908:807000:8185008185008219733474Brachyspira pilosicoli P43/6/78 chromosome, complete genomephage tail tape measure protein6e-1274.7
NC_010465:2582080:2582080258208025849952916Yersinia pseudotuberculosis YPIII, complete genomephage tail tape measure protein, TP901 family8e-1274.3
NC_014319:1613611:1618490161849016222153726Leuconostoc gasicomitatum LMG 18811, complete genomeTMP repeat family7e-1171.2
NC_006270:1511000:1524027152402715293275301Bacillus licheniformis ATCC 14580, complete genomePhage tail tape measure protein9e-1170.9
NC_006322:1507411:1524888152488815301885301Bacillus licheniformis ATCC 14580, complete genomeYqbO9e-1170.9
NC_017337:1107930:1132933113293311360463114Staphylococcus aureus subsp. aureus ED133 chromosome, completePhage tail length tape-measure protein4e-1068.6
NC_017347:2070000:2076339207633920808684530Staphylococcus aureus subsp. aureus T0131 chromosome, completePhi PVL hypothetical protein8e-1067.4
NC_010723:2269372:2273340227334022768103471Clostridium botulinum E3 str. Alaska E43, complete genometail tape measure protein8e-1067.4
NC_009782:2091815:2097094209709421016234530Staphylococcus aureus subsp. aureus Mu3, complete genomephi PVL ORF 15 and 16 homologue8e-1067.4
NC_017341:2127815:2127815212781521321674353Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,9e-1067.4
NC_016941:1979411:1980892198089219854214530Staphylococcus aureus subsp. aureus MSHR1132, complete genomehypothetical protein1e-0966.6
NC_012658:1405788:1421958142195814244982541Clostridium botulinum Ba4 str. 657 chromosome, complete genomephage protein1e-0966.6
NC_007793:2086896:2096778209677821013074530Staphylococcus aureus subsp. aureus USA300, complete genomephi77 ORF001-like protein, phage tail tape measure protein2e-0966.2
NC_010674:2328307:2336799233679923402633465Clostridium botulinum B str. Eklund 17B, complete genometail tape measure protein2e-0966.2
NC_014829:2915500:2918627291862729219323306Bacillus cellulosilyticus DSM 2522 chromosome, complete genomephage tail tape measure protein, TP901 family3e-0965.5
NC_009674:2678932:2687249268724926912894041Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeTP901 family phage tail tape measure protein4e-0965.5
NC_017338:2034698:2048815204881520533264512Staphylococcus aureus subsp. aureus JKD6159 chromosome, completebacteriophage tail tape measure protein7e-0964.3
NC_016928:1538901:1544186154418615487274542Staphylococcus aureus subsp. aureus M013 chromosome, completephage tail length tape-measure protein2e-0863.2
NC_009641:2101579:2101579210157921061084530Staphylococcus aureus subsp. aureus str. Newman chromosome,phage tail tape measure protein2e-0862.8
NC_002952:2125750:2137898213789821424274530Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein2e-0862.8
NC_017342:1254000:1257417125741712619464530Staphylococcus aureus subsp. aureus TCH60 chromosome, completebacteriophage tail length tape measure protein2e-0862.8
NC_002745:2018761:2018761201876120232904530Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein2e-0862.8
NC_006361:1665378:1689491168949116939754485Nocardia farcinica IFM 10152, complete genomeputative phage tail2e-0862.8
NC_017343:1963912:1963912196391219684414530Staphylococcus aureus subsp. aureus ECT-R 2, complete genomephage tail tape measure protein, TP901 family, core region2e-0862.8
NC_010674:950276:9619499619499652093261Clostridium botulinum B str. Eklund 17B, complete genomephage tail tape measure protein, family5e-0861.6
NC_009801:995396:1013530101353010149091380Escherichia coli E24377A, complete genomehypothetical protein8e-0860.8
NC_012563:1704345:1712033171203317146632631Clostridium botulinum A2 str. Kyoto, complete genomephage tail tape measure protein, TP901 family, core region3e-0759.3
NC_016771:2039195:2043285204328520483005016Bacillus cereus NC7401, complete genomeprophage LambdaBa02, tape measure protein6e-0758.2
NC_011658:2080390:2084480208448020894955016Bacillus cereus AH187 chromosome, complete genomeputative prophage LambdaBa02, tape measure protein6e-0758.2
NC_016077:1944000:1969193196919319713132121Acidaminococcus intestini RyC-MR95 chromosome, complete genomephage tail tape measure protein1e-0657
NC_012581:466798:4753574753574796944338Bacillus anthracis str. CDC 684 chromosome, complete genomeputative prophage LambdaBa02, tape measure protein4e-0655.5
NC_012659:3724729:3760481376048137633602880Bacillus anthracis str. A0248, complete genome4e-0655.5
NC_007530:3749645:3760581376058137634602880Bacillus anthracis str. 'Ames Ancestor', complete genomeprophage lambdaba02, tape measure protein, putative4e-0655.5
NC_003997:3724702:3760454376045437633332880Bacillus anthracis str. Ames, complete genomeprophage LambdaBa02, tape measure protein, putative4e-0655.5
NC_005945:3747652:3760954376095437638332880Bacillus anthracis str. Sterne, complete genomeprophage LambdaBa02, tape measure protein, putative4e-0655.5
NC_008726:1533727:1545021154502115492504230Mycobacterium vanbaalenii PYR-1, complete genomephage tail tape measure protein, TP901 family1e-0553.9
NC_016111:639819:6545576545576580063450Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-0553.9