Pre_GI: BLASTP Hits

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Query: NC_013199:845000:868634 Lactobacillus rhamnosus Lc 705, complete genome

Start: 868634, End: 869836, Length: 1203

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008021:531730:5528195528195540181200Streptococcus pyogenes MGAS9429, complete genomephage protein3e-85315
NC_009332:1269000:1286673128667312878601188Streptococcus pyogenes str. Manfredo chromosome, complete genomephage major capsid protein4e-85315
NC_012471:781063:8055998055998067861188Streptococcus equi subsp. equi 4047, complete genomephage major capsid protein5e-85315
NC_008555:1204000:1229544122954412307281185Listeria welshimeri serovar 6b str. SLCC5334, complete genomephage capsid protein2e-82306
NC_003212:2592600:2601387260138726025741188Listeria innocua Clip11262, complete genomehypothetical protein6e-81301
NC_016052:1818659:1837911183791118391701260Tetragenococcus halophilus NBRC 12172, complete genomeputative capsid protein1e-75284
NC_014136:329484:3483303483303494931164Leuconostoc kimchii IMSNU11154 chromosome, complete genomehypothetical protein6e-74278
NC_010471:1081590:1098162109816210993251164Leuconostoc citreum KM20, complete genomemajor head protein-like protein1e-73277
NC_002662:1042546:1056510105651010577031194Lactococcus lactis subsp. lactis Il1403, complete genomecapsid protein3e-54212
NC_013198:1538792:1545808154580815477361929Lactobacillus rhamnosus GG, complete genomephage protein, prohead protease3e-37155
NC_013766:679906:6989306989307000991170Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein4e-34145
NC_017351:2074000:2090682209068220919291248Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage major capsid protein, HK97 family4e-23109
NC_003923:2053510:2066761206676120680081248Staphylococcus aureus subsp. aureus MW2, complete genomecapsid protein1e-22107
NC_002953:2032278:2046007204600720472541248Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative capsid protein1e-22107
NC_007795:2034000:2052003205200320532501248Staphylococcus aureus subsp. aureus NCTC 8325, complete genomephage major capsid protein, HK97 family1e-22107
NC_017337:1990298:1993374199337419946211248Staphylococcus aureus subsp. aureus ED133 chromosome, completePhage capsid protein2e-21103
NC_014915:2963500:2984612298461229857181107Geobacillus sp. Y412MC52 chromosome, complete genomephage major capsid protein, HK97 family2e-1997.1
NC_013411:597235:6182176182176193231107Geobacillus sp. Y412MC61, complete genomephage major capsid protein, HK97 family2e-1997.1
NC_002662:447236:4681374681374694501314Lactococcus lactis subsp. lactis Il1403, complete genomecapsid protein2e-1894
NC_006322:3418268:3447825344782534491081284Bacillus licheniformis ATCC 14580, complete genomehypothetical protein5e-1892.4
NC_006270:3418097:3447654344765434489371284Bacillus licheniformis ATCC 14580, complete genomehypothetical phagelike protein5e-1892.4
NC_009674:2678932:2693892269389226950671176Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeHK97 family phage major capsid protein3e-1789.7
NC_014479:1961692:1973512197351219747051194Bacillus subtilis subsp. spizizenii str. W23 chromosome, completephage major capsid protein (HK97 family)5e-1789.4
NC_015519:2489728:2517046251704625182271182Tepidanaerobacter sp. Re1 chromosome, complete genomephage major capsid protein, HK97 family6e-1582
NC_010610:535790:5567655567655580271263Lactobacillus fermentum IFO 3956, complete genomephage capsid protein2e-1480.9
NC_016791:1341858:1350301135030113514551155Clostridium sp. BNL1100 chromosome, complete genomephage major capsid protein, HK97 family4e-1479.7
NC_017190:871352:8713528713528725571206Bacillus amyloliquefaciens LL3 chromosome, complete genomephage major capsid protein5e-1479
NC_017190:852171:8713528713528725571206Bacillus amyloliquefaciens LL3 chromosome, complete genomephage major capsid protein5e-1479
NC_014551:865254:8872778872778884821206Bacillus amyloliquefaciens DSM 7, complete genomePhage major capsid protein6e-1479
NC_015428:1544728:1569591156959115708321242Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage major capsid protein, HK97 family2e-1067.4
UCMB5137:120656:1363761363761376771302Bacillus atrophaeus UCMB-5137phage major capsid protein, HK97 family5e-1065.9
NC_012984:1027898:1043899104389910452811383Lactobacillus plantarum JDM1, complete genomecapsid protein2e-0963.5
NC_002662:1418970:1433914143391414351401227Lactococcus lactis subsp. lactis Il1403, complete genomemajor head protein precursor6e-0962.4
NC_008261:1787345:1801706180170618028901185Clostridium perfringens ATCC 13124, complete genomephage major capsid protein, HK97 family2e-0860.5
NC_012563:1704345:1706388170638817075631176Clostridium botulinum A2 str. Kyoto, complete genomephage major capsid protein, HK97 family2e-0757.4
NC_020272:1311932:1342665134266513439571293Bacillus amyloliquefaciens IT-45, complete genomephage major capsid protein, HK97 family4e-0756.2
NC_014624:2878457:2879916287991628813281413Eubacterium limosum KIST612 chromosome, complete genomephage major capsid protein3e-0653.5
NC_007929:293709:3131723131723143681197Lactobacillus salivarius subsp. salivarius UCC118, complete genomeMajor head protein5e-0652.8