Pre_GI: BLASTP Hits

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Query: NC_013199:845000:867963 Lactobacillus rhamnosus Lc 705, complete genome

Start: 867963, End: 868592, Length: 630

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014479:1961692:197474219747421975368627Bacillus subtilis subsp. spizizenii str. W23 chromosome, completephage head maturation protease9e-43173
UCMB5137:120656:135711135711136337627Bacillus atrophaeus UCMB-5137hypothetical protein2e-41169
NC_020272:1311932:134200113420011342627627Bacillus amyloliquefaciens IT-45, complete genomephage head maturation protease4e-41167
NC_017351:2074000:209201720920172092601585Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage prohead protease, HK97 family1e-32139
NC_003923:2053510:206809620680962068680585Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-32139
NC_007795:2034000:205333820533382053922585Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeprohead protease2e-32139
NC_013450:854790:876344876344876928585Staphylococcus aureus subsp. aureus ED98, complete genomephage prohead protease, HK97 family2e-32139
NC_017337:1990298:199470919947091995293585Staphylococcus aureus subsp. aureus ED133 chromosome, completeProhead protease2e-32139
NC_002953:2032278:204734220473422047938597Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative prohead protease2e-32139
NC_010674:950276:957171957171957797627Clostridium botulinum B str. Eklund 17B, complete genomephage prohead protease, HK97 family7e-27120
NC_009778:1556222:158192415819241582547624Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-26119
NC_020260:1615135:164043716404371641060624Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-26119
NC_007712:4023516:404489940448994045498600Sodalis glossinidius str. 'morsitans', complete genomephage protease3e-25115
NC_013766:679906:698300698300698866567Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein3e-25115
NC_009436:2776410:280233328023332802932600Enterobacter sp. 638, complete genomeHK97 family phage prohead protease2e-24112
NC_014393:937000:962624962624963265642Clostridium cellulovorans 743B chromosome, complete genomephage prohead protease, HK97 family9e-24110
NC_012984:1027898:104328710432871043892606Lactobacillus plantarum JDM1, complete genomeprotease2e-23108
NC_002662:447236:467560467560468147588Lactococcus lactis subsp. lactis Il1403, complete genomeprohead protease3e-23108
NC_019960:1658657:170215817021581702736579Prevotella dentalis DSM 3688 chromosome 1, complete sequencephage prohead protease, HK97 family4e-23108
NC_013892:3803278:381834338183433818942600Xenorhabdus bovienii SS-2004 chromosome, complete genomecapsid protease9e-22103
NC_014355:3951855:396476039647603965512753Candidatus Nitrospira defluvii, complete genomephage prohead protease, HK97 family4e-2097.8
NC_011083:2375061:238424623842462384764519Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phage prohead protease, HK97 family7e-2097.1
NC_003197:2327474:233666623366662337184519Salmonella typhimurium LT2, complete genomehypothetical protein7e-2097.1
NC_010102:683444:708625708625709143519Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-2097.1
NC_016810:2325190:233438223343822334900519Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage prohead protease, HK97 family7e-2097.1
NC_016856:2379027:238821923882192388737519Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein7e-2097.1
NC_016857:2325190:233438223343822334900519Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage prohead protease, HK97 family7e-2097.1
NC_016860:2323017:233220923322092332727519Salmonella enterica subsp. enterica serovar Typhimurium strphage prohead protease, HK97 family protein7e-2097.1
NC_016863:2324293:233641123364112336929519Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein7e-2097.1
NC_017046:2324554:233374623337462334264519Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage prohead protease, HK97 family7e-2097.1
NC_015520:3060495:307776430777643078729966Mahella australiensis 50-1 BON chromosome, complete genomephage prohead protease, HK97 family2e-1995.5
NC_016631:2112175:213889021388902139648759Granulicella mallensis MP5ACTX8 chromosome, complete genomephage prohead protease, HK97 family2e-1995.5
NC_008261:1787345:180293118029311803536606Clostridium perfringens ATCC 13124, complete genomephage prohead protease, HK97 family4e-1994.7
NC_013198:1538792:1545808154580815477361929Lactobacillus rhamnosus GG, complete genomephage protein, prohead protease1e-1893.2
NC_010163:614634:642559642559643155597Acholeplasma laidlawii PG-8A chromosome, complete genomepeptidase U351e-1892.8
NC_010939:896500:910841910841911413573Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative prohead protease (GP4)6e-1890.9
NC_011773:4141765:415923241592324159951720Bacillus cereus AH820 chromosome, complete genomeprohead protease3e-1788.2
NC_009674:2678932:269510926951092695681573Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeHK97 family phage prohead protease5e-1787.8
NC_012914:1824955:183631118363111836946636Paenibacillus sp. JDR-2, complete genomephage prohead protease, HK97 family8e-1787
NC_016935:1636278:166460416646041665308705Paenibacillus mucilaginosus 3016 chromosome, complete genomecaudovirus prohead protease8e-1787
NC_014364:2670000:268190326819032682610708Spirochaeta smaragdinae DSM 11293 chromosome, complete genomephage prohead protease, HK97 family3e-1685.1
NC_005945:467427:467427467427468017591Bacillus anthracis str. Sterne, complete genomeprophage LambdaBa04, prohead protease, putative6e-1684.3
NC_012658:1405788:141612714161271416780654Clostridium botulinum Ba4 str. 657 chromosome, complete genomeprohead protease1e-1583.2
NC_009617:1085000:109324610932461093839594Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeHK97 family phage prohead protease2e-1582.4
NC_012659:3464500:347661434766143477198585Bacillus anthracis str. A0248, complete genomeputative prophage LambdaBa01, prohead protease5e-1580.9
NC_012581:755982:761391761391761975585Bacillus anthracis str. CDC 684 chromosome, complete genomeputative prophage LambdaBa01, prohead protease5e-1580.9
NC_007530:3462624:347671434767143477298585Bacillus anthracis str. 'Ames Ancestor', complete genomeprophage lambdaba01, prohead protease, putative5e-1580.9
NC_005945:3463199:347728934772893477873585Bacillus anthracis str. Sterne, complete genomeprophage LambdaBa01, prohead protease, putative5e-1580.9
NC_003997:3462497:347658734765873477171585Bacillus anthracis str. Ames, complete genomeprophage LambdaBa01, prohead protease, putative5e-1580.9
NC_014393:2868846:288672228867222887321600Clostridium cellulovorans 743B chromosome, complete genomephage prohead protease, HK97 family1e-1480.1
NC_014150:2560475:257859725785972579259663Brachyspira murdochii DSM 12563 chromosome, complete genomephage prohead protease, HK97 family2e-1479.3
NC_014150:1936154:195391219539121954574663Brachyspira murdochii DSM 12563 chromosome, complete genomephage prohead protease, HK97 family2e-1479.3
NC_002662:1042546:105594210559421056538597Lactococcus lactis subsp. lactis Il1403, complete genomeprophage pi2 protein 324e-1478.2
NC_009656:5297000:530099953009995301508510Pseudomonas aeruginosa PA7 chromosome, complete genomeHK97 family phage prohead protease8e-1477
NC_014910:1501952:150754715075471508095549Alicycliphilus denitrificans BC chromosome, complete genomephage prohead protease, hk97 family1e-1376.3
NC_018604:758819:765248765248765898651Brachyspira pilosicoli WesB complete genomephage prohead protease3e-1375.5
NC_008555:1204000:122896912289691229553585Listeria welshimeri serovar 6b str. SLCC5334, complete genomephage maturation protease, putative2e-1272
NC_003212:2592600:260256526025652603149585Listeria innocua Clip11262, complete genomehypothetical protein2e-1168.9
NC_014330:1593000:161048416104841611107624Brachyspira pilosicoli 95/1000 chromosome, complete genomephage prohead protease2e-1168.9
NC_015275:911999:932409932409932999591Clostridium lentocellum DSM 5427 chromosome, complete genomephage prohead protease, HK97 family8e-1167
NC_011989:1604939:162456316245631625159597Agrobacterium vitis S4 chromosome 1, complete sequenceprohead protease1e-1066.6
NC_014624:2878457:288133828813382881988651Eubacterium limosum KIST612 chromosome, complete genomephage prohead protease2e-1065.5
NC_016147:2266419:228349422834942284021528Pseudoxanthomonas spadix BD-a59 chromosome, complete genomephage prohead protease, HK97 family protein3e-1065.1
NC_018515:4660808:467785446778544678474621Desulfosporosinus meridiei DSM 13257 chromosome, complete genomephage prohead protease, HK97 family5e-1064.3
NC_017068:1852708:188960318896031890238636Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phage prohead protease3e-0961.6