Pre_GI: BLASTP Hits

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Query: NC_013199:845000:866756 Lactobacillus rhamnosus Lc 705, complete genome

Start: 866756, End: 868009, Length: 1254

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009332:1269000:1288528128852812897481221Streptococcus pyogenes str. Manfredo chromosome, complete genomephage portal protein2e-121435
NC_008024:548165:5693975693975706171221Streptococcus pyogenes MGAS10750, complete genomePortal protein2e-121435
NC_008021:531730:5509435509435521631221Streptococcus pyogenes MGAS9429, complete genomeportal protein2e-121435
NC_004606:877707:8984538984538996731221Streptococcus pyogenes SSI-1, complete genomeputative portal protein (phage associated)2e-120432
NC_012471:781063:8037118037118049311221Streptococcus equi subsp. equi 4047, complete genomephage portal protein4e-120431
NC_013766:679906:6970686970686983031236Listeria monocytogenes 08-5578 chromosome, complete genomeportal protein5e-41169
NC_016052:1839763:1839763183976318409531191Tetragenococcus halophilus NBRC 12172, complete genomeputative portal protein4e-38159
NC_017351:2074000:2092594209259420938441251Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage portal protein, HK97 family4e-35149
NC_003923:2053510:2068673206867320699231251Staphylococcus aureus subsp. aureus MW2, complete genomeportal protein5e-35149
NC_007795:2034000:2053915205391520551051191Staphylococcus aureus subsp. aureus NCTC 8325, complete genomephage portal protein, HK97 family5e-35149
NC_002953:2032278:2047919204791920491691251Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative portal protein5e-35149
NC_013450:854790:8751618751618763511191Staphylococcus aureus subsp. aureus ED98, complete genomephage portal protein, HK97 family1e-33144
NC_017337:1990298:1995286199528619965361251Staphylococcus aureus subsp. aureus ED133 chromosome, completePhage portal protein2e-33143
NC_015428:1544728:1571518157151815726661149Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage portal protein, HK97 family1e-25117
NC_020272:1311932:1340758134075813420381281Bacillus amyloliquefaciens IT-45, complete genomephage portal protein1e-23111
NC_010610:535790:5550965550965563161221Lactobacillus fermentum IFO 3956, complete genomephage portal protein6e-22105
UCMB5137:120656:1344681344681357481281Bacillus atrophaeus UCMB-5137Portal protein8e-22105
NC_014479:1961692:1975358197535819765901233Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein2e-21103
NC_010520:1614333:1639595163959516408451251Clostridium botulinum A3 str. Loch Maree, complete genomephage portal protein, HK97 family1e-20101
NC_002662:447236:4664814664814675601080Lactococcus lactis subsp. lactis Il1403, complete genomeprophage pi1 protein 351e-20101
NC_017297:2017000:2030277203027720315271251Clostridium botulinum F str. 230613 chromosome, complete genomephage portal protein, HK97 family1e-20100
NC_009699:2017329:2030171203017120314031233Clostridium botulinum F str. Langeland chromosome, complete genomeHK97 family phage portal protein2e-20100
NC_006322:3418268:3449824344982434511341311Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-1998.2
NC_006270:3418097:3449653344965334509631311Bacillus licheniformis ATCC 14580, complete genomehypothetical phagelike protein1e-1998.2
NC_012563:2925472:2943195294319529444451251Clostridium botulinum A2 str. Kyoto, complete genomephage portal protein, HK97 family1e-1997.8
NC_012563:2101449:2118838211883821200881251Clostridium botulinum A2 str. Kyoto, complete genomephage portal protein, HK97 family4e-1892.8
NC_013198:1538792:1547736154773615488361101Lactobacillus rhamnosus GG, complete genomeportal protein4e-1892.8
NC_007434:1712000:1799308179930818005581251Burkholderia pseudomallei 1710b chromosome I, complete sequencephage portal protein, HK97 family4e-1789.7
NC_020181:5217000:522070752207075221702996Enterobacter aerogenes EA1509E, complete genomePhage portal protein1e-1688.2
NC_014393:4775452:4801904480190448032651362Clostridium cellulovorans 743B chromosome, complete genomephage portal protein, HK97 family2e-1687
NC_015558:905227:9052279052279063451119Streptococcus parauberis KCTC 11537 chromosome, complete genomeputative portal protein5e-1685.9
NC_010939:896500:9096079096079108391233Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePortal protein (GP3)1e-1584.3
NC_016816:2953530:2955614295561429569181305Pantoea ananatis LMG 5342, complete genomeputative phage portal protein, HK97 family4e-1582.8
NC_015697:506494:5261905261905274461257Lactobacillus reuteri SD2112 chromosome, complete genomeHK97 family portal protein8e-1582
NC_010320:1268355:1292868129286812941301263Thermoanaerobacter sp. X514 chromosome, complete genomeHK97 family phage portal protein1e-1481.6
NC_014538:1598106:1620251162025116215071257Thermoanaerobacter sp. X513 chromosome, complete genomephage portal protein, HK97 family1e-1481.6
NC_021184:4493440:4496274449627444975091236Desulfotomaculum gibsoniae DSM 7213, complete genomephage portal protein, HK97 family2e-1480.5
NC_015520:2974048:2984087298408729854091323Mahella australiensis 50-1 BON chromosome, complete genomephage portal protein, HK97 family3e-1480.1
NC_016627:4323370:4346649434664943479711323Clostridium clariflavum DSM 19732 chromosome, complete genomephage portal protein, HK97 family3e-1480.1
NC_014410:800500:8160288160288173501323Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,phage portal protein, HK97 family4e-1479.3
NC_012984:1027898:1042197104219710433151119Lactobacillus plantarum JDM1, complete genomeprophage Lp3 protein 17, portal protein5e-1479.3
NC_011770:2690501:2717258271725827185201263Pseudomonas aeruginosa LESB58, complete genomeportal protein5e-1479.3
NC_018870:2316499:2346696234669623480181323Thermacetogenium phaeum DSM 12270 chromosome, complete genomephage portal protein, HK97 family9e-1478.6
NC_009012:1934107:1956610195661019579321323Clostridium thermocellum ATCC 27405, complete genomephage portal protein, HK97 family9e-1478.6
NC_014376:1879000:1880555188055518818201266Clostridium saccharolyticum WM1 chromosome, complete genomephage portal protein, HK97 family2e-1377
NC_018604:758819:7640137640137652451233Brachyspira pilosicoli WesB complete genomephage portal protein, HK97 family3e-1376.6
NC_014393:937000:9614029614029626761275Clostridium cellulovorans 743B chromosome, complete genomephage portal protein, HK97 family6e-1375.5
NC_015697:468234:4857444857444870091266Lactobacillus reuteri SD2112 chromosome, complete genomeHK97 family portal protein1e-1274.7
NC_010471:1081590:1100022110002211011731152Leuconostoc citreum KM20, complete genomehypothetical protein1e-1274.7
NC_008530:1454118:1474513147451314757781266Lactobacillus gasseri ATCC 33323, complete genomehypothetical protein1e-1274.3
NC_009706:2673906:2716013271601327172571245Clostridium kluyveri DSM 555 chromosome, complete genomePhage portal protein2e-1273.6
NC_016631:2112175:2137245213724521388971653Granulicella mallensis MP5ACTX8 chromosome, complete genomephage portal protein, HK97 family3e-1273.6
NC_009633:4097536:4119807411980741210661260Alkaliphilus metalliredigens QYMF chromosome, complete genomeHK97 family phage portal protein3e-1273.2
NC_016633:3069518:3092387309238730937151329Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomephage portal protein, HK97 family5e-1272.4
NC_007432:654904:6822006822006834891290Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, portal protein, HK97 family8e-1272
NC_007929:293709:3113073113073124821176Lactobacillus salivarius subsp. salivarius UCC118, complete genomePortal protein1e-1171.2
NC_014150:2560475:2579246257924625805231278Brachyspira murdochii DSM 12563 chromosome, complete genomephage portal protein, HK97 family2e-1170.9
NC_014150:1936154:1954561195456119558381278Brachyspira murdochii DSM 12563 chromosome, complete genomephage portal protein, HK97 family2e-1170.9
NC_011898:3367457:3389815338981533910591245Clostridium cellulolyticum H10, complete genomephage portal protein, HK97 family2e-1170.9
NC_014330:1593000:1611091161109116123891299Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative phage portal protein, HK97 family2e-1170.5
NC_014136:329484:3501933501933513351143Leuconostoc kimchii IMSNU11154 chromosome, complete genomeprophage pi1 protein 359e-1168.6
NC_008346:2523289:253743325374332538110678Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeportal protein, HK97 family, putative3e-1066.6
NC_019960:1658657:1702738170273817039311194Prevotella dentalis DSM 3688 chromosome 1, complete sequencephage portal protein, HK97 family3e-1066.6
NC_009436:2776410:2802925280292528041511227Enterobacter sp. 638, complete genomeHK97 family phage portal protein4e-1066.6
NC_009656:5297000:5301505530150553027431239Pseudomonas aeruginosa PA7 chromosome, complete genomeHK97 family phage portal protein6e-1065.9
NC_016791:4038069:4060355406035540616111257Clostridium sp. BNL1100 chromosome, complete genomephage portal protein, HK97 family6e-1065.5
NC_013656:1549634:1567256156725615684341179Lactococcus lactis subsp. lactis KF147, complete genomephage portal protein8e-1065.1
NC_006087:2439252:2464711246471124659551245Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage-related portal protein2e-0963.9
NC_014829:2915500:2927258292725829285081251Bacillus cellulosilyticus DSM 2522 chromosome, complete genomephage portal protein, HK97 family2e-0963.9
NC_016147:2266419:2282349228234922834971149Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeHK97 family phage portal protein2e-0963.9
NC_002662:1418970:1435902143590214370801179Lactococcus lactis subsp. lactis Il1403, complete genomeprophage pi3 protein 242e-0963.9
NC_020260:1615135:1639203163920316404441242Cronobacter sakazakii Sp291, complete genomehypothetical protein6e-0962.4
NC_014364:2111685:2139608213960821408491242Spirochaeta smaragdinae DSM 11293 chromosome, complete genomephage portal protein, HK97 family8e-0962
NC_013892:3803278:3818935381893538201611227Xenorhabdus bovienii SS-2004 chromosome, complete genomePortal protein7e-0962
NC_015519:2489728:2518942251894225201981257Tepidanaerobacter sp. Re1 chromosome, complete genomephage portal protein, HK97 family9e-0961.6
NC_009778:1556222:1580690158069015819311242Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-0961.6
NC_014624:2878457:2881975288197528832341260Eubacterium limosum KIST612 chromosome, complete genomephage portal protein1e-0861.2
NC_010516:2676746:2693237269323726944211185Clostridium botulinum B1 str. Okra, complete genomephage portal protein, HK97 family2e-0860.8
NC_013892:2005480:2013969201396920151921224Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-0860.5
NC_015520:3060495:3078964307896430814082445Mahella australiensis 50-1 BON chromosome, complete genomephage portal protein, HK97 family3e-0860.1
NC_014727:1220869:1242354124235412436371284Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,phage portal protein, hk97 family4e-0859.7
NC_012559:1685812:1688436168843616897341299Laribacter hongkongensis HLHK9, complete genomehypothetical protein8e-0858.9
NC_016944:1621575:1623675162367516250001326Vibrio cholerae IEC224 chromosome I, complete sequencephage portal protein9e-0858.5
NC_015856:3912195:3934855393485539361051251Collimonas fungivorans Ter331 chromosome, complete genomephage portal protein, HK97 family1e-0758.5
NC_016935:1636278:1663382166338216646471266Paenibacillus mucilaginosus 3016 chromosome, complete genomephage-related putative head portal protein1e-0758.2
NC_013892:671000:6829526829526841901239Xenorhabdus bovienii SS-2004 chromosome, complete genomeportal protein3e-0756.6
NC_009697:2558286:2574717257471725759011185Clostridium botulinum A str. ATCC 19397 chromosome, completeHK97 family phage portal protein4e-0756.2
NC_015690:1186545:1213921121392112151861266Paenibacillus mucilaginosus KNP414 chromosome, complete genomephage related putative head portal protein5e-0756.2
NC_009699:3429817:3446571344657134477641194Clostridium botulinum F str. Langeland chromosome, complete genomeHK97 family phage portal protein5e-0755.8
NC_011365:592256:6114626114626128081347Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomephage portal protein, HK97 family1e-0655.1
NC_012563:1704345:1704345170434517056011257Clostridium botulinum A2 str. Kyoto, complete genomephage portal protein, HK97 family2e-0653.9
NC_009674:2678932:2695671269567126969811311Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeHK97 family phage portal protein4e-0653.1
NC_011386:2073726:2106129210612921073491221Oligotropha carboxidovorans OM5, complete genomephage portal protein, HK97 family3e-0653.1
NC_015684:2000771:2017170201717020183901221Oligotropha carboxidovorans OM5 chromosome, complete genomephage portal protein3e-0653.1
NC_017281:1253905:1271834127183412730061173Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomePhage portal protein4e-0652.8
NC_017297:3428429:3445350344535034463781029Clostridium botulinum F str. 230613 chromosome, complete genomephage portal protein, HK97 family7e-0652.4
NC_014364:2670000:2682607268260726842231617Spirochaeta smaragdinae DSM 11293 chromosome, complete genomephage portal protein, HK97 family8e-0652