Pre_GI: BLASTP Hits

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Query: NC_013199:845000:864358 Lactobacillus rhamnosus Lc 705, complete genome

Start: 864358, End: 864813, Length: 456

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009332:1269000:129215712921571292624468Streptococcus pyogenes str. Manfredo chromosome, complete genomephage terminase small subunit3e-31134
NC_008021:531730:548067548067548534468Streptococcus pyogenes MGAS9429, complete genomephage terminase small subunit3e-31134
NC_008024:548165:566521566521566988468Streptococcus pyogenes MGAS10750, complete genomephage terminase small subunit3e-31134
NC_012471:781063:801015801015801482468Streptococcus equi subsp. equi 4047, complete genomephage terminase, small subunit3e-31134
NC_003485:579946:595901595901596368468Streptococcus pyogenes MGAS8232, complete genomehypothetical protein3e-31134
NC_004606:877707:895757895757896224468Streptococcus pyogenes SSI-1, complete genomehypothetical protein3e-31133
NC_013766:679906:694611694611695138528Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein6e-1992.8
NC_017337:1990298:199845019984501998920471Staphylococcus aureus subsp. aureus ED133 chromosome, completePhage Terminase Small Subunit8e-1475.9
NC_013450:854790:872717872717873187471Staphylococcus aureus subsp. aureus ED98, complete genomeputative phage terminase, small subunit, P27 family8e-1475.9
NC_003923:2053510:207184020718402072307468Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-1375.1
NC_007795:2034000:205708220570822057549468Staphylococcus aureus subsp. aureus NCTC 8325, complete genomephage terminase, small subunit, putative2e-1375.1
NC_017351:2074000:209575820957582096228471Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage terminase small subunit1e-1375.1
NC_016052:1839763:184284118428411843305465Tetragenococcus halophilus NBRC 12172, complete genomeputative phage terminase small subunit2e-1064.7
NC_017297:2017000:203353520335352034020486Clostridium botulinum F str. 230613 chromosome, complete genomephage terminase small subunit2e-0961.6
NC_009699:2017329:203342920334292033914486Clostridium botulinum F str. Langeland chromosome, complete genomeP27 family phage terminase small subunit2e-0961.6
NC_012563:2925472:294645329464532946938486Clostridium botulinum A2 str. Kyoto, complete genomephage terminase, small subunit, P27 family4e-0960.5
NC_013411:597235:613771613771614268498Geobacillus sp. Y412MC61, complete genomephage terminase, small subunit, , P27 family7e-0752.8
NC_014915:2963500:298966729896672990164498Geobacillus sp. Y412MC52 chromosome, complete genomephage terminase, small subunit, , P27 family7e-0752.8
NC_002662:447236:464045464045464497453Lactococcus lactis subsp. lactis Il1403, complete genometerminase small subunit1e-0652
NC_017295:2022085:204345820434582043913456Clostridium acetobutylicum EA 2018 chromosome, complete genomephage terminase-like protein small subunit3e-0650.8
NC_003030:2023751:204405120440512044506456Clostridium acetobutylicum ATCC 824, complete genomePhage terminase-like protein, small subunit3e-0650.8
NC_015687:2025345:204564520456452046100456Clostridium acetobutylicum DSM 1731 chromosome, complete genomePhage terminase-like protein, small subunit3e-0650.8
NC_014136:329484:353391353391353957567Leuconostoc kimchii IMSNU11154 chromosome, complete genomeprophage Lp3 protein 14, terminase small subunit6e-0649.7