Pre_GI: BLASTP Hits

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Query: NC_013199:845000:863363 Lactobacillus rhamnosus Lc 705, complete genome

Start: 863363, End: 864157, Length: 795

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013450:854790:872236872236872589354Staphylococcus aureus subsp. aureus ED98, complete genomeputative phage endonuclease1e-1377.4
NC_007795:2034000:205767920576792058023345Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein1e-1377
NC_017351:2074000:209635720963572096710354Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeHNH endonuclease family protein2e-1375.9
NC_017337:1990298:199904919990491999402354Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical protein3e-1375.9
NC_016894:3580274:358789735878973588628732Acetobacterium woodii DSM 1030 chromosome, complete genomeprophage LambdaBa046e-1374.7
NC_017068:1852708:189366718936671894344678Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein7e-1374.7
NC_015660:739040:759154759154759552399Geobacillus thermoglucosidasius C56-YS93 chromosome, completeHNH endonuclease4e-1272
NC_009332:1269000:129279512927951293133339Streptococcus pyogenes str. Manfredo chromosome, complete genomephage HNH endonuclease5e-1271.6
NC_008024:548165:566012566012566350339Streptococcus pyogenes MGAS10750, complete genomephage endonuclease5e-1271.6
NC_008021:531730:547558547558547896339Streptococcus pyogenes MGAS9429, complete genomephage endonuclease5e-1271.6
NC_004606:877707:895247895247895585339Streptococcus pyogenes SSI-1, complete genomehypothetical protein5e-1271.6
NC_003485:579946:595392595392595730339Streptococcus pyogenes MGAS8232, complete genomehypothetical protein5e-1271.6
NC_012471:781063:800517800517800852336Streptococcus equi subsp. equi 4047, complete genomephage HNH endonuclease7e-1271.2
NC_016052:1839763:184422518442251844764540Tetragenococcus halophilus NBRC 12172, complete genomehypothetical protein3e-1169.3
NC_014915:2963500:299025429902542990661408Geobacillus sp. Y412MC52 chromosome, complete genomeHNH endonuclease5e-1168.6
NC_013411:597235:613274613274613681408Geobacillus sp. Y412MC61, complete genomeHNH endonuclease5e-1168.6
UCMB5137:120656:131475131475131843369Bacillus atrophaeus UCMB-5137prophage Lp3 protein 122e-1066.6
NC_006270:3418097:345361934536193453993375Bacillus licheniformis ATCC 14580, complete genomeputative electron transporter2e-1066.2
NC_014554:1821320:182441718244171824887471Lactobacillus plantarum subsp. plantarum ST-III chromosome,phage endonuclease2e-1066.2
NC_009674:2678932:269927626992762699659384Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeHNH endonuclease4e-1065.5
NC_007929:785875:805250805250805576327Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhage endonuclease7e-1064.7
NC_020272:1311932:133775513377551338120366Bacillus amyloliquefaciens IT-45, complete genomeHNH endonuclease1e-0963.5
NC_008525:1013979:101653510165351017044510Pediococcus pentosaceus ATCC 25745, complete genomeRestriction endonuclease2e-0962.8
NC_012984:1027898:103878910387891039448660Lactobacillus plantarum JDM1, complete genomeputative HNH nuclease1e-0860.5
NC_020164:1677452:169767616976761697990315Staphylococcus warneri SG1, complete genomephage protein2e-0859.7
NC_002662:1418970:143981714398171440332516Lactococcus lactis subsp. lactis Il1403, complete genomeprophage pi3 protein 283e-0859.3
NC_007929:293709:308058308058308588531Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhage endonuclease4e-0858.5
NC_017337:321155:342152342152342466315Staphylococcus aureus subsp. aureus ED133 chromosome, completeZn finger domain containing protein6e-0858.2
NC_013656:1549634:157117315711731571688516Lactococcus lactis subsp. lactis KF147, complete genomephage HNH endonuclease family6e-0858.2
NC_017338:1517723:153952915395291539843315Staphylococcus aureus subsp. aureus JKD6159 chromosome, completephage HNH endonuclease7e-0858.2
NC_003923:1533500:155539915553991555713315Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein7e-0858.2
NC_013450:2047000:206886320688632069177315Staphylococcus aureus subsp. aureus ED98, complete genomeHNH endonuclease family protein8e-0857.8
NC_002951:351029:373489373489373803315Staphylococcus aureus subsp. aureus COL, complete genomeprophage L54a, HNH endonuclease family protein7e-0857.8
NC_011773:4141765:416371441637144164031318Bacillus cereus AH820 chromosome, complete genomeHNH endonuclease7e-0857.8
NC_015683:1296000:130380013038001304552753Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein7e-0857.8
NC_017317:1291294:130016913001691300921753Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein7e-0857.8
NC_017342:1765132:176710617671061767420315Staphylococcus aureus subsp. aureus TCH60 chromosome, completeprophage L54a7e-0857.8
NC_002952:1592000:161606816160681616382315Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein1e-0757.4
NC_002953:998944:100120210012021001522321Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein2e-0756.2
NC_009513:1184000:118527211852721185808537Lactobacillus reuteri F275, complete genomeHNH endonuclease4e-0755.5
NC_016935:1636278:165982416598241660165342Paenibacillus mucilaginosus 3016 chromosome, complete genomeelectron transporter5e-0755.1
NC_015519:2489728:249385924938592494239381Tepidanaerobacter sp. Re1 chromosome, complete genomeHNH endonuclease5e-0755.1
NC_016894:3988180:399418839941883994634447Acetobacterium woodii DSM 1030 chromosome, complete genomehypothetical protein3e-0652.4
NC_015519:2526047:252635225263522526738387Tepidanaerobacter sp. Re1 chromosome, complete genomeHNH endonuclease4e-0652.4
NC_015687:2025345:204627620462762046587312Clostridium acetobutylicum DSM 1731 chromosome, complete genomephage-related Zn finger domain-containing protein4e-0652
NC_003030:2023751:204468220446822044993312Clostridium acetobutylicum ATCC 824, complete genomePhage-related, Zn finger domain containing protein4e-0652
NC_017295:2022085:204408920440892044400312Clostridium acetobutylicum EA 2018 chromosome, complete genomePhage-related, Zn finger domain containing protein4e-0652
NC_009436:2776410:280668128066812807031351Enterobacter sp. 638, complete genomeHNH endonuclease5e-0651.6
NC_017297:3428429:344881934488193449217399Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein6e-0651.2
NC_004606:1107500:113180311318031132114312Streptococcus pyogenes SSI-1, complete genomehypothetical protein9e-0650.8
NC_003485:296140:309828309828310133306Streptococcus pyogenes MGAS8232, complete genomehypothetical protein9e-0650.8