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Query: NC_013199:845000:851796 Lactobacillus rhamnosus Lc 705, complete genome

Start: 851796, End: 852752, Length: 957

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013198:1095591:111296611129661113922957Lactobacillus rhamnosus GG, complete genomednad domain protein0634
NC_010999:1245239:125990412599041260869966Lactobacillus casei, complete genomePutative uncharacterized protein3e-172604
NC_003212:2413824:243569424356942436626933Listeria innocua Clip11262, complete genomehypothetical protein1e-1894
NC_003210:2380419:239262223926222393596975Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-1893.6
NC_011660:2924397:293249629324962933416921Listeria monocytogenes HCC23 chromosome, complete genomegp492e-1893.2
NC_008526:506263:511120511120511866747Lactobacillus casei ATCC 334, complete genomehypothetical protein4e-1789
NC_010999:561914:568055568055568801747Lactobacillus casei, complete genomePutative uncharacterized protein7e-1788.2
NC_003212:57061:849218492185832912Listeria innocua Clip11262, complete genomehypothetical protein9e-1787.8
NC_014650:603500:621711621711622664954Geobacillus sp. Y4.1MC1 chromosome, complete genomeprimosome subunit DnaD6e-1582
NC_014624:3316916:331691633169163317398483Eubacterium limosum KIST612 chromosome, complete genomeDnaD domain-containing protein3e-1273.2
NC_020210:2969862:2996116299611629974171302Geobacillus sp. GHH01, complete genomehypothetical protein7e-1271.6
NC_020207:1170000:117207611720761172966891Enterococcus faecium NRRL B-2354, complete genomeReplication initiation and membrane attachment7e-1271.6
NC_016077:1278104:128882312888231289683861Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein6e-1065.1
NC_018515:4660808:468733646873364688310975Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeDnaD-like protein1e-0860.8
NC_009633:2592000:262555726255572626345789Alkaliphilus metalliredigens QYMF chromosome, complete genomeprimosome subunit DnaD1e-0654.3
NC_020134:420500:428019428019428897879Clostridium stercorarium subsp. stercorarium DSM 8532, completehypothetical protein2e-0653.1
NC_014554:2159782:217248721724872173353867Lactobacillus plantarum subsp. plantarum ST-III chromosome,prophage Lp2 protein 203e-0652.8