Pre_GI: BLASTP Hits

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Query: NC_013199:845000:847885 Lactobacillus rhamnosus Lc 705, complete genome

Start: 847885, End: 848589, Length: 705

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014136:329484:367054367054367797744Leuconostoc kimchii IMSNU11154 chromosome, complete genomehypothetical protein7e-36150
NC_007929:293709:297109297109297837729Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhage antirepressor protein2e-34145
NC_014011:1139818:115821711582171158990774Aminobacterium colombiense DSM 12261 chromosome, complete genomeprophage antirepressor4e-34144
NC_014551:576000:578839578839579609771Bacillus amyloliquefaciens DSM 7, complete genomephage antirepressor [Staphylococcus prophage phiPV83]6e-34144
NC_010609:880196:883218883218883991774Lactobacillus reuteri JCM 1112, complete genomephage antirepressor4e-33141
NC_009513:870837:873859873859874632774Lactobacillus reuteri F275, complete genomeprophage antirepressor4e-33141
NC_009513:1184000:119712311971231197926804Lactobacillus reuteri F275, complete genomephage antirepressor protein2e-32139
NC_011593:1680215:168222016822201682999780Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,phage antirepressor protein8e-32137
NC_017219:1680344:168201016820101682789780Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative phage antirepressor8e-32137
NC_015052:1030708:104657610465761047355780Bifidobacterium longum subsp. infantis 157F, complete genomephage antirepressor7e-32137
NC_015558:1425271:144646214464621447229768Streptococcus parauberis KCTC 11537 chromosome, complete genomephage antirepressor protein1e-31136
NC_015558:1389369:140798014079801408705726Streptococcus parauberis KCTC 11537 chromosome, complete genomeputative P1-type antirepressor - phage associated1e-31136
NC_017353:887581:893259893259894014756Staphylococcus lugdunensis N920143, complete genomeputative anti repressor3e-31135
NC_012563:2597934:260796126079612608749789Clostridium botulinum A2 str. Kyoto, complete genomephage antirepressor protein5e-31134
NC_010079:2102856:212212521221252122877753Staphylococcus aureus subsp. aureus USA300_TCH1516, completepossible bacteriophage antirepressor3e-30132
NC_017337:321155:325741325741326493753Staphylococcus aureus subsp. aureus ED133 chromosome, completePhage antirepressor protein3e-30132
NC_014925:578759:586200586200586955756Staphylococcus pseudintermedius HKU10-03 chromosome, completePhage antirepressor protein3e-30132
NC_013174:2321000:232849123284912329225735Jonesia denitrificans DSM 20603, complete genomephage antirepressor protein2e-30132
NC_009487:362475:365544365544366296753Staphylococcus aureus subsp. aureus JH9 chromosome, completephage antirepressor protein4e-30131
NC_009632:361229:365614365614366366753Staphylococcus aureus subsp. aureus JH1 chromosome, completephage antirepressor protein4e-30131
NC_002758:2101137:212058321205832121338756Staphylococcus aureus subsp. aureus Mu50, complete genomeanti repressor4e-30131
NC_017338:2034698:207441120744112075163753Staphylococcus aureus subsp. aureus JKD6159 chromosome, completephage antirepressor protein3e-30131
NC_008021:779380:782542782542783291750Streptococcus pyogenes MGAS9429, complete genomephage antirepressor protein3e-30131
NC_013450:854790:859860859860860612753Staphylococcus aureus subsp. aureus ED98, complete genomephage anti repressor6e-30130
NC_002737:780857:783634783634784362729Streptococcus pyogenes M1 GAS, complete genomeputative P1-type antirepressor - phage associated1e-29129
NC_009332:1269000:130504913050491305810762Streptococcus pyogenes str. Manfredo chromosome, complete genomephage antirepressor protein2e-29129
NC_003485:579946:582257582257583018762Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor2e-29129
NC_009487:2148316:216523321652332165982750Staphylococcus aureus subsp. aureus JH9 chromosome, completephage antirepressor protein5e-29127
NC_009632:2148767:216510721651072165856750Staphylococcus aureus subsp. aureus JH1 chromosome, completephage antirepressor protein5e-29127
NC_007622:1842000:188155718815571882306750Staphylococcus aureus RF122, complete genomephage anti-repressor protein5e-29127
NC_014393:4323368:434092443409244341685762Clostridium cellulovorans 743B chromosome, complete genomeprophage antirepressor4e-29127
NC_009706:1972000:198827419882741989077804Clostridium kluyveri DSM 555 chromosome, complete genomeprophage antirepressor6e-27120
NC_004606:623853:628626628626629354729Streptococcus pyogenes SSI-1, complete genomeputative P1-type antirepressor (phage associated)7e-27120
NC_008525:780500:784187784187784912726Pediococcus pentosaceus ATCC 25745, complete genomePhage anti-repressor protein4e-25115
NC_006582:2944237:298451629845162985238723Bacillus clausii KSM-K16, complete genomephage anti-repressor protein2e-24112
NC_014328:303063:355534355534356307774Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative prophage antirepressor3e-24112
NC_020272:2748733:279414927941492794877729Bacillus amyloliquefaciens IT-45, complete genomeProtein kilA4e-24111
NC_003212:2413824:243981624398162440586771Listeria innocua Clip11262, complete genomehypothetical protein6e-24110
NC_019842:1172944:117692511769251177584660Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,Protein kilA3e-23108
NC_003210:2380419:239645423964542397230777Listeria monocytogenes EGD-e, complete genomehypothetical protein4e-23108
NC_011660:2924397:292850229285022929290789Listeria monocytogenes HCC23 chromosome, complete genomephage anti-repressor1e-22107
NC_003212:57061:810818108181854774Listeria innocua Clip11262, complete genomehypothetical protein2e-22106
NC_007519:1782067:179362917936291794168540Desulfovibrio alaskensis G20 chromosome, complete genomephage-encoded protein-like3e-22105
NC_016799:167362:181688181688182506819Corynebacterium diphtheriae 31A chromosome, complete genomeputative anti-repressor protein7e-22103
NC_007519:2773000:279055527905552791169615Desulfovibrio alaskensis G20 chromosome, complete genomephage-encoded protein-like4e-21101
NC_017328:303987:322722322722323444723Shigella flexneri 2002017 chromosome, complete genomeDNA-binding protein Roi3e-2098.6
NC_017045:119046:129750129750130499750Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,phage antirepressor protein1e-1997.1
NC_014738:2094000:212450121245012125250750Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,phage antirepressor protein1e-1997.1
NC_011601:1039500:105684210568421057564723Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding protein2e-1995.9
NC_008258:269806:293814293814294536723Shigella flexneri 5 str. 8401, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W2e-1995.9
NC_020207:1906803:191924619192461919971726Enterococcus faecium NRRL B-2354, complete genomeputative phage-encoded protein-like protein4e-1995.1
NC_011146:3426500:345744234574423458137696Geobacter bemidjiensis Bem, complete genomephage regulatory protein, Rha family1e-1893.6
NC_013361:1558423:157703215770321577754723Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding protein6e-1890.9
NC_002663:1988000:200009120000912000810720Pasteurella multocida subsp. multocida str. Pm70, complete genomehypothetical protein9e-1890.5
NC_013364:1183000:120081812008181201540723Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding protein2e-1789.4
NC_002655:1332961:134955513495551350283729Escherichia coli O157:H7 EDL933, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W2e-1789.4
NC_009783:1956000:196037119603711961039669Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein3e-1788.6
NC_008563:5011997:5011997501199750131481152Escherichia coli APEC O1, complete genomeputative antirepressor1e-1583.2
NC_011742:4962008:4962008496200849631591152Escherichia coli S88 chromosome, complete genomehypothetical protein1e-1583.2
NC_012914:1851102:186286418628641863493630Paenibacillus sp. JDR-2, complete genomephage regulatory protein, Rha family1e-1583.2
NC_012881:1802000:182705518270551827882828Desulfovibrio salexigens DSM 2638, complete genomephage regulatory protein, Rha family2e-1582.8
NC_013364:3312379:333186433318643332343480Escherichia coli O111:H- str. 11128, complete genome2e-1582.4
NC_009714:1404000:140507014050701405768699Campylobacter hominis ATCC BAA-381, complete genomephage anti-repressor protein4e-1581.6
NC_009801:1419324:142227414222741423128855Escherichia coli E24377A, complete genomephage regulatory protein, Rha family6e-1580.9
NC_013173:953633:977811977811978314504Desulfomicrobium baculatum DSM 4028, complete genomephage regulatory protein, Rha family1e-1480.1
NC_007712:1219957:123223012322301232988759Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-1480.1
NC_012988:4292815:434290443429044343815912Methylobacterium extorquens DM4, complete genomeantirepressor protein2e-1479.7
NC_012108:1973861:199637619963761997080705Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein2e-1479.3
NC_014624:1840209:186105118610511861893843Eubacterium limosum KIST612 chromosome, complete genomeprophage antirepressor3e-1479
NC_011837:1935294:195284019528401953553714Clostridium kluyveri NBRC 12016, complete genomehypothetical protein9e-1477
NC_009706:2003194:202133720213372022050714Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein9e-1477
NC_009706:1935418:195300519530051953718714Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein9e-1477
NC_017059:1972895:199250819925081993311804Rhodospirillum photometricum DSM 122, complete genomeUncharacterized phage-encoded protein-like1e-1377
NC_018080:5091772:511283951128395113681843Pseudomonas aeruginosa DK2 chromosome, complete genomeantirepressor2e-1376.3
NC_010655:1606901:163592716359271636721795Akkermansia muciniphila ATCC BAA-835, complete genomeprophage antirepressor2e-1376.3
NC_009656:4527457:459262245926224593452831Pseudomonas aeruginosa PA7 chromosome, complete genomeputative antirepressor2e-1376.3
NC_012559:1888000:189513218951321895965834Laribacter hongkongensis HLHK9, complete genomehypothetical protein3e-1375.5
NC_012559:1497548:151113015111301511963834Laribacter hongkongensis HLHK9, complete genomehypothetical protein4e-1375.1
NC_018704:1424728:143131814313181432010693Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein4e-1375.1
NC_002937:2263763:227961722796172280495879Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeantirepressor, putative6e-1374.3
NC_012779:2184927:219903221990322199871840Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-1273.6
NC_009436:2776410:280935228093522809870519Enterobacter sp. 638, complete genomehypothetical protein2e-1273.2
NC_015660:739040:744560744560745327768Geobacillus thermoglucosidasius C56-YS93 chromosome, completephage regulatory protein, Rha family2e-1272.4
NC_009648:1541699:156721515672151567733519Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-1272
NC_015519:2526047:253269625326962533364669Tepidanaerobacter sp. Re1 chromosome, complete genomephage regulatory protein, Rha family5e-1271.2
NC_008570:2216736:224554922455492246283735Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomephage regulatory protein, Rha family6e-1271.2
NC_007519:1782067:178976817897681790265498Desulfovibrio alaskensis G20 chromosome, complete genomephage-encoded protein-like8e-1270.9
NC_007929:785875:786513786513786944432Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhage antirepressor7e-1270.9
NC_012563:2680246:269385026938502694623774Clostridium botulinum A2 str. Kyoto, complete genomeGp26 protein7e-1270.9
NC_014915:2963500:300000330000033000782780Geobacillus sp. Y412MC52 chromosome, complete genomephage regulatory protein, Rha family2e-1169.7
NC_013411:597235:603153603153603932780Geobacillus sp. Y412MC61, complete genomephage regulatory protein, Rha family2e-1169.7
NC_017190:2130651:221174522117452212497753Bacillus amyloliquefaciens LL3 chromosome, complete genomeSPBc2 prophage-derived antirepressor protein yoqD2e-1168.9
NC_010337:2848360:288696328869632887631669Heliobacterium modesticaldum Ice1, complete genomehypothetical protein3e-1168.6
NC_016077:1388775:138877513887751389437663Acidaminococcus intestini RyC-MR95 chromosome, complete genomephage regulatory protein rha4e-1168.6
NC_018866:1790564:180191918019191802644726Dehalobacter sp. DCA chromosome, complete genomephage regulatory protein, rha family5e-1168.2
NC_009633:4097536:413600141360014136663663Alkaliphilus metalliredigens QYMF chromosome, complete genomeRha family phage regulatory protein5e-1168.2
NC_013174:2455420:246188524618852462655771Jonesia denitrificans DSM 20603, complete genomephage antirepressor protein4e-1168.2
NC_012779:1939747:194867619486761949458783Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-1168.2
NC_007519:2773000:279536727953672795585219Desulfovibrio alaskensis G20 chromosome, complete genomerha protein, phage phi-807e-1167.8
NC_007712:1516589:152667515266751527457783Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein9e-1167.4
NC_000964:2146000:219877621987762199531756Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-1065.9
NC_011740:2072173:209951320995132100274762Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from phage origin4e-1065.1
NC_007643:3799425:382213838221383822866729Rhodospirillum rubrum ATCC 11170, complete genomeUncharacterized phage-encoded protein-like4e-1065.1
NC_017188:1172181:124543412454341246141708Bacillus amyloliquefaciens TA208 chromosome, complete genomeDNA-binding protein anti-repressor; phage SPbeta4e-1065.1
NC_017191:1173989:124701112470111247718708Bacillus amyloliquefaciens XH7 chromosome, complete genomeDNA-binding protein anti-repressor4e-1065.1
NC_003212:1248000:126543812654381266205768Listeria innocua Clip11262, complete genomehypothetical protein5e-1064.7
NC_003212:1713958:174305217430521743819768Listeria innocua Clip11262, complete genomehypothetical protein6e-1064.7
NC_011745:3245000:326114132611413261878738Escherichia coli ED1a chromosome, complete genomehypothetical protein6e-1064.3
NC_009012:2927793:293490029349002935646747Clostridium thermocellum ATCC 27405, complete genomeBRO-like protein7e-1064.3
NC_014624:1369642:139149313914931392305813Eubacterium limosum KIST612 chromosome, complete genomeantirepressor7e-1064.3
NC_016845:1285435:132252413225241323081558Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein8e-0960.8
NC_014632:1112733:112580811258081126494687Ilyobacter polytropus DSM 2926 chromosome, complete genomephage regulatory protein, Rha family1e-0860.1
NC_008309:1553399:158028215802821580668387Haemophilus somnus 129PT, complete genomepossible phage-related protein2e-0859.3
NC_012658:1810640:181229818122981813038741Clostridium botulinum Ba4 str. 657 chromosome, complete genomeantirepressor, phage associated2e-0859.3
NC_007929:785875:786366786366786497132Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhage antirepressor8e-0857.4
NC_008530:646207:648241648241649041801Lactobacillus gasseri ATCC 33323, complete genomeUncharacterized phage-encoded protein9e-0857.4
NC_013364:2898964:290672929067292907313585Escherichia coli O111:H- str. 11128, complete genomeputative antirepressor4e-0755.1
NC_009495:1821938:182521718252171825915699Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeantirepressor4e-0651.6