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Query: NC_013199:845000:846787 Lactobacillus rhamnosus Lc 705, complete genome

Start: 846787, End: 847452, Length: 666

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014915:2963500:300167230016723002349678Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, XRE family8e-23107
NC_013411:597235:601586601586602263678Geobacillus sp. Y412MC61, complete genometranscriptional regulator, XRE family8e-23107
NC_017338:2034698:207646620764662077173708Staphylococcus aureus subsp. aureus JKD6159 chromosome, completephage transcriptional regulator3e-0858.5
NC_014251:243700:260223260223260963741Streptococcus pneumoniae TCH8431/19A chromosome, complete genomebifunctional S24 family peptidase/transcriptional regulator4e-0858.2
NC_010380:254088:257014257014257727714Streptococcus pneumoniae Hungary19A-6, complete genomeputative DNA-binding phage protein1e-0756.6
NC_012469:198096:201022201022201735714Streptococcus pneumoniae Taiwan19F-14, complete genomeputative DNA-binding phage protein1e-0756.6
NC_014251:440875:443234443234443947714Streptococcus pneumoniae TCH8431/19A chromosome, complete genomeDNA-binding phage protein1e-0756.6
NC_017294:115500:117859117859118473615Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeXRE family transcriptional regulator3e-0652
NC_015433:1998427:200953820095382010251714Streptococcus suis ST3 chromosome, complete genomeputative DNA-binding phage protein4e-0651.6
NC_015389:905165:918044918044918676633Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, XRE family1e-0550.4