Pre_GI: BLASTP Hits

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Query: NC_013199:392450:412726 Lactobacillus rhamnosus Lc 705, complete genome

Start: 412726, End: 413574, Length: 849

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:2399205:240318524031852404024840Dickeya dadantii Ech703, complete genomePTS system, mannose/fructose/sorbose family, IID subunit2e-67256
NC_017047:3212000:321415532141553214997843Rahnella aquatilis HX2 chromosome, complete genomePTS system mannose-specific transporter subunit IID8e-67253
NC_015061:3147691:314955331495533150395843Rahnella sp. Y9602 chromosome, complete genomePTS system, mannose/fructose/sorbose family, IID subunit8e-67253
NC_016818:3148000:315008931500893150931843Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system mannose/fructose/sorbose family transporter subunit IID1e-66253
NC_009617:4436837:445046144504614451282822Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IID4e-65248
NC_013192:2434664:245197524519752452808834Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IID subunit5e-65247
NC_016612:2902628:292990929299092930757849Klebsiella oxytoca KCTC 1686 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IID1e-60233
NC_013192:469771:483533483533484450918Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IID subunit6e-60231
NC_010723:1379256:139967813996781400622945Clostridium botulinum E3 str. Alaska E43, complete genomePTS system, mannose/fructose/sorbose family, IID component5e-54211
NC_014724:439594:477107477107478027921Lactobacillus amylovorus GRL 1112 chromosome, complete genomePTS system, mannose-specific IID component6e-54211
NC_015214:437733:476722476722477642921Lactobacillus acidophilus 30SC chromosome, complete genomePTS system, mannose-specific IID component9e-54210
NC_008261:967973:970981970981971892912Clostridium perfringens ATCC 13124, complete genomePTS system, mannose/fructose/sorbose family, IID component2e-53209
NC_006814:403723:441344441344442282939Lactobacillus acidophilus NCFM, complete genomemannose-specific PTS system component IID8e-53207
NC_014106:419511:452561452561453481921Lactobacillus crispatus ST1, complete genomePTS system, mannose-specific IID component1e-52206
NC_015975:1936504:195040519504051951319915Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS family mannose/fructose/sorbose porter component IID3e-51202
NC_018528:1681060:168733116873311688251921Lactobacillus helveticus R0052 chromosome, complete genomePTS system mannose family transporter subunit IID4e-51201
NC_015602:1339067:134426113442611345181921Lactobacillus kefiranofaciens ZW3 chromosome, complete genomePTS system, mannose-specific IID component1e-50199
NC_008530:1775841:178007817800781781007930Lactobacillus gasseri ATCC 33323, complete genomemannose-specific PTS system component IID8e-50197
NC_005362:1870620:187627718762771877206930Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIID probable mannose specific2e-49196
NC_011660:2509362:251640625164062517317912Listeria monocytogenes HCC23 chromosome, complete genomePTS system fructose-specific transporter subunit IID4e-49194
NC_013171:228356:228356228356229294939Anaerococcus prevotii DSM 20548, complete genomePTS system mannose/fructose/sorbose family IID component7e-49194
NC_013504:1648551:165526816552681656197930Lactobacillus johnsonii FI9785 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probably mannose specific1e-48193
NC_011294:4604283:462884346288434629679837Salmonella enterica subsp. enterica serovar Enteritidis strPTS system transporter subunit D3e-37155
NC_016023:875416:883779883779884585807Bacillus coagulans 36D1 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IID1e-36154
NC_013198:394000:4184674184674201551689Lactobacillus rhamnosus GG, complete genomePTS system, mannose-specific IICD component5e-36151
NC_004631:3841975:386377538637753864632858Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative PTS system protein1e-34147
NC_003198:3855157:387828538782853879142858Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system protein1e-34147
NC_009792:4693152:470986447098644710724861Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-33143
NC_014334:2696000:2706521270652127082151695Lactobacillus casei str. Zhang chromosome, complete genomePTS system mannose-specific transporter subunit IICD3e-31135
NC_008526:343445:3656743656743672721599Lactobacillus casei ATCC 334, complete genomeMannose-specific PTS system component IICD8e-31134
NC_015519:270637:287720287720288547828Tepidanaerobacter sp. Re1 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IID2e-29129
NC_015389:1977736:200684920068492007703855Coriobacterium glomerans PW2 chromosome, complete genomePTS system IID component, Man family3e-29129
NC_009089:581655:583393583393584232840Clostridium difficile 630, complete genomePTS system, IId component1e-28126
NC_014377:1897857:190925419092541910114861Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system IID component, Man family (TC 4.A.6)2e-26119
NC_011149:4474012:449142044914204492292873Salmonella enterica subsp. enterica serovar Agona str. SL483,fructose permease iid component6e-26118
NC_005126:949226:968992968992969885894Photorhabdus luminescens subsp. laumondii TTO1, complete genomePTS system, N-acetylgalactosamine-specific IID component (EIID-AGA) (N-acetylgalactosamine-permease IID component) (Phosphotransferase enzyme II, D co4e-25115
NC_016023:1769925:178811317881131788934822Bacillus coagulans 36D1 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IID4e-25115
NC_014376:4369666:437043543704354371226792Clostridium saccharolyticum WM1 chromosome, complete genomePTS system mannose/fructose/sorbose family IID component5e-24111
NC_020063:4653422:466958146695814670423843Enterobacteriaceae bacterium strain FGI 57, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID5e-24111
NC_012962:869295:883460883460884302843Photorhabdus asymbiotica, complete genomepts system, n-acetylgalactosamine-specific iid component (eiid-aga (n-acetylgalactosamine-permease iid component) (phosphotransferas enzyme ii, d comp7e-24111
NC_012967:3191319:321439832143983215276879Escherichia coli B str. REL606 chromosome, complete genomePTS system, N-acetylgalactosamine-specific IID component9e-23107
CP002185:3475991:349917434991743500052879Escherichia coli W, complete genomeN-acetylgalactosamine-specific IID component9e-23107
NC_011742:3799788:381094738109473811873927Escherichia coli S88 chromosome, complete genomephosphotransferase system enzyme IID8e-23107
NC_008563:3888232:389622338962233897125903Escherichia coli APEC O1, complete genomehypothetical protein8e-23107
NC_015389:809474:817609817609818496888Coriobacterium glomerans PW2 chromosome, complete genomePTS system IID component, Man family1e-21103
NC_005139:518760:527148527148528032885Vibrio vulnificus YJ016 chromosome I, complete sequencephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID2e-21103
NC_015424:2357600:237836123783612379137777Aeromonas veronii B565 chromosome, complete genomePTS system, IID component2e-21103
NC_004337:3249791:327202832720283272837810Shigella flexneri 2a str. 301, complete genomeputative transport enzyme subunit3e-21102
NC_010067:1116148:112641511264151127305891Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-20100
NC_017328:3289853:3311322331132233127791458Shigella flexneri 2002017 chromosome, complete genomePTS system N-acetylgalactosamine-specific transporter subunit IID2e-1790.1
NC_011134:1222739:122454512245451225333789Streptococcus equi subsp. zooepidemicus str. MGCS10565, completemannose permease IID component ManZ5e-1788.6
NC_010380:124655:147184147184147999816Streptococcus pneumoniae Hungary19A-6, complete genomePTS system, IID component6e-1684.7
NC_009442:1158268:116443711644371165252816Streptococcus suis 05ZYH33 chromosome, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID9e-1684.3
NC_007946:3855445:386362838636283864338711Escherichia coli UTI89, complete genomeputative phosphotransferase system protein4e-1582
NC_015389:1782825:179819117981911799054864Coriobacterium glomerans PW2 chromosome, complete genomePTS system IID component, Man family7e-1374.7
NC_015425:841754:855681855681856496816Clostridium botulinum BKT015925 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIC4e-1168.9