Pre_GI: BLASTN Hits

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Query: NC_013198:2458080 Lactobacillus rhamnosus GG, complete genome

Start: 2458080, End: 2479009, Length: 20930

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013199:24266862426686244660019915Lactobacillus rhamnosus Lc 705, complete genome019250BLASTN svgBLASTP svg
NC_010999:25160002516000253888722888Lactobacillus casei, complete genome6e-118432BLASTN svgBLASTP svg
NC_014334:23079502307950232672418775Lactobacillus casei str. Zhang chromosome, complete genome4e-113416BLASTN svgBLASTP svg
NC_008526:23731902373190239665623467Lactobacillus casei ATCC 334, complete genome9e-111408BLASTN svgBLASTP svg
NC_013199:1407742*1407742143009922358Lactobacillus rhamnosus Lc 705, complete genome8e-28133BLASTN svgBLASTP svg
NC_013199:1886271*1886271190783621566Lactobacillus rhamnosus Lc 705, complete genome3e-27131BLASTN svgBLASTP svg
NC_013199:1966334*1966334198922322890Lactobacillus rhamnosus Lc 705, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_013199:11500001150000117399223993Lactobacillus rhamnosus Lc 705, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_013198:51179551179553527023476Lactobacillus rhamnosus GG, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010999:1381497*1381497140718925693Lactobacillus casei, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013199:23869242386924241111624193Lactobacillus rhamnosus Lc 705, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013199:2536705*2536705255640419700Lactobacillus rhamnosus Lc 705, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014334:10392481039248106254923302Lactobacillus casei str. Zhang chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013198:298000*29800032013422135Lactobacillus rhamnosus GG, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010999:1979989*1979989200135021362Lactobacillus casei, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013198:10955911095591112961534025Lactobacillus rhamnosus GG, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013198:1921500*1921500194147019971Lactobacillus rhamnosus GG, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014334:1775781*1775781179812122341Lactobacillus casei str. Zhang chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_008526:250000*25000027159921600Lactobacillus casei ATCC 334, complete genome1e-0560BLASTN svgBLASTP svg