Pre_GI: BLASTP Hits

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Query: NC_013198:394000:412099 Lactobacillus rhamnosus GG, complete genome

Start: 412099, End: 412572, Length: 474

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010498:4072681:407499240749924075462471Escherichia coli SMS-3-5, complete genomePTS system, fructose family, IIA component4e-36150
NC_020181:969599:978102978102978566465Enterobacter aerogenes EA1509E, complete genomePTS system, fructose-specific IIA component6e-32136
NC_013850:2685835:269425926942592694729471Klebsiella variicola At-22 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN6e-32136
NC_014377:532816:5535915535915554221832Thermosediminibacter oceani DSM 16646 chromosome, complete genome2e-31134
NC_015663:4447984:445852544585254458989465Enterobacter aerogenes KCTC 2190 chromosome, complete genomePTS IIA-like nitrogen-regulatory protein PtsN2e-31134
NC_016845:2691129:270226827022682702738471Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,PTS family enzyme IIA/ enzyme IIBC7e-31132
NC_012731:2650603:266172126617212662191471Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomefructose-mannitol-specific PTS family enzyme IIA component7e-31132
NC_009648:1914621:192574119257411926211471Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomePTS family enzyme IIA/ enzyme IIBC7e-31132
NC_011660:2175537:219569621956962196160465Listeria monocytogenes HCC23 chromosome, complete genomeiiabc fructose/xylitol-pts3e-26117
NC_007644:3229:145621456215026465Moorella thermoacetica ATCC 39073, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN4e-25113
NC_015565:2827444:284287628428762843328453Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeputative PTS IIA-like nitrogen-regulatory protein PtsN6e-25112
NC_009437:2579161:258256325825632583012450Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN5e-24110
NC_013921:2293411:229819122981912298646456Thermoanaerobacter italicus Ab9 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN2e-23107
NC_015214:1853106:1874088187408818760912004Lactobacillus acidophilus 30SC chromosome, complete genomePTS system, fructose-specific enzyme II7e-23106
NC_015634:2492771:2522737252273725246351899Bacillus coagulans 2-6 chromosome, complete genomePTS system, fructose subfamily, IIC subunit7e-23106
NC_015391:2449927:245398724539872454439453Carnobacterium sp. 17-4 chromosome, complete genomePTS system mannose-specific EIIBCA component1e-22105
NC_013198:394000:401179401179401628450Lactobacillus rhamnosus GG, complete genomePTS system, IIA component1e-22105
NC_014335:3461115:3471548347154834732601713Bacillus cereus biovar anthracis str. CI chromosome, completePTS fructose-specific enzyme IIBC component5e-22103
NC_015687:250768:264280264280264723444Clostridium acetobutylicum DSM 1731 chromosome, complete genomePTS system, IIA component6e-22103
NC_003030:249648:264282264282264725444Clostridium acetobutylicum ATCC 824, complete genomePTS system, IIA component6e-22103
NC_012581:709234:7175947175947194741881Bacillus anthracis str. CDC 684 chromosome, complete genomePTS system fructose-specific transporter subunit IIABC1e-21102
NC_011773:3547507:3558350355835035602061857Bacillus cereus AH820 chromosome, complete genomePTS system fructose-specific transporter subunit IIABC1e-21102
NC_003909:3483244:3494145349414534960011857Bacillus cereus ATCC 10987, complete genomePTS system, fructose-specific IIABC component4e-21100
NC_014654:1:259152591526364450Halanaerobium sp. 'sapolanicus' chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-2098.6
NC_005362:1796696:1806355180635518083401986Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable fructose specific4e-2097.1
NC_013642:942767:970308970308970760453Thermotoga naphthophila RKU-10, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN9e-2095.9
NC_009328:3322802:3325601332560133275771977Geobacillus thermodenitrificans NG80-2 chromosome, complete genomephosphotransferase system, fructose-specific IIC component1e-1995.5
NC_012781:4065:1960719607215351929Eubacterium rectale ATCC 33656, complete genomePTS system, fructose-specific, IIABC component1e-1995.5
NC_010483:642577:649497649497649949453Thermotoga sp. RQ2, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN2e-1995.1
NC_016894:377446:3791203791203810301911Acetobacterium woodii DSM 1030 chromosome, complete genomefructose-specific PTS system II components ABC3e-1994
NC_015424:2510764:2528848252884825307941947Aeromonas veronii B565 chromosome, complete genomePermease IIC component4e-1993.6
NC_020272:1384525:1386630138663013885881959Bacillus amyloliquefaciens IT-45, complete genomePTS system mannose-specific transporter subunits IIBCA2e-1891.7
NC_019842:2575000:2590378259037825923361959Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,PTS system mannose-specific transporter subunits IIBCA2e-1891.7
NC_009725:2517428:2536355253635525383131959Bacillus amyloliquefaciens FZB42, complete genomeManP5e-1890.1
NC_017191:2514401:2529250252925025312051956Bacillus amyloliquefaciens XH7 chromosome, complete genomePTS system mannose-specific transporter subunit IIBCA8e-1889.4
NC_017188:2512357:2527206252720625291611956Bacillus amyloliquefaciens TA208 chromosome, complete genomeManP8e-1889.4
NC_014976:3469395:3485323348532334872751953Bacillus subtilis BSn5 chromosome, complete genomePTS mannose-specific transporter subunit IIBCA2e-1788.6
NC_017195:1230485:1249720124972012516721953Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completephosphotransferase system2e-1788.2
NC_011969:4945441:4958931495893149608831953Bacillus cereus Q1 chromosome, complete genomepts mannose-specific enzyme iibca component1e-1685.1
NC_016779:4969626:4981803498180349837551953Bacillus cereus F837/76 chromosome, complete genomePTS system mannose-specific transporter subunit IIB2e-1685.1
NC_012472:5015621:5027811502781150297631953Bacillus cereus 03BB102, complete genomephosphotransferase system2e-1685.1
NC_008600:5005345:5017535501753550195021968Bacillus thuringiensis str. Al Hakam, complete genomephosphotransferase system (PTS) mannose-specific enzyme IIBCA2e-1685.1
NC_016629:3496630:349663034966303497079450Desulfovibrio africanus str. Walvis Bay chromosome, completeputative PTS IIA-like nitrogen-regulatory protein PtsN4e-1684
NC_015732:2057895:2076340207634020784692130Spirochaeta caldaria DSM 7334 chromosome, complete genomesodium/hydrogen exchanger4e-1683.6
NC_017270:1755552:179720217972021797642441Vibrio cholerae LMA3984-4 chromosome chromosome I, completePhosphotransferase system mannitol/fructose- specific IIA domain protein5e-1683.6
NC_020244:1264500:1275845127584512777971953Bacillus subtilis XF-1, complete genomephosphotransferase system (PTS) mannose-specific enzyme IIBCA component6e-1683.2
NC_013171:416279:4333464333464352081863Anaerococcus prevotii DSM 20548, complete genomePTS system, fructose subfamily, IIC subunit1e-1478.6
NC_015152:2887414:290229129022912902737447Spirochaeta sp. Buddy chromosome, complete genomePTS IIA-like nitrogen-regulatory protein PtsN2e-1478.2
NC_014328:2872721:288955228895522889989438Clostridium ljungdahlii ATCC 49587 chromosome, complete genomePTS system fructose/mannose-specific transporter subunit IIA6e-1476.6
NC_015500:484984:5087925087925109722181Treponema brennaborense DSM 12168 chromosome, complete genomesodium/hydrogen exchanger8e-1476.3
NC_014334:369974:3873613873613893491989Lactobacillus casei str. Zhang chromosome, complete genomePTS system fructose-specific transporter subunit IIABC9e-1475.9
NC_006055:183823:2101622101622123092148Mesoplasma florum L1, complete genomefructose-specific PTS system IIABC component4e-1373.9
NC_020409:560278:574539574539574988450Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative PTS IIA-like nitrogen-regulatory protein PtsN5e-1373.6
NC_002937:1706000:171449117144911714940450Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completePTS system, IIA component5e-1373.6
NC_015152:1230995:123217012321701232622453Spirochaeta sp. Buddy chromosome, complete genomePTS IIA-like nitrogen-regulatory protein PtsN1e-1272.4
NC_017098:875378:8774938774938795742082Spirochaeta africana DSM 8902 chromosome, complete genomeKef-type K+ transport system membrane protein9e-1269.3
NC_015389:1070500:108521810852181085676459Coriobacterium glomerans PW2 chromosome, complete genomePTS system D-fructose-specific IIA component (F1P-forming), Frc family2e-1168.2
NC_009617:648000:651641651641652087447Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS transporter subunit IIA-like nitrogen-regulatory protein PtsN2e-1065.1
NC_003112:744476:767138767138767587450Neisseria meningitidis MC58, complete genomePTS system, nitrogen regulatory IIA protein2e-1065.1
NC_015731:990000:991959991959992426468Nitrosomonas sp. Is79A3 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN2e-1065.1
NC_013174:73948:734997349973951453Jonesia denitrificans DSM 20603, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN4e-1063.9
NC_014844:1634985:165780216578021658251450Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 24e-1063.9
NC_017505:751836:771041771041771490450Neisseria meningitidis alpha710 chromosome, complete genomeptsN; PTS system, nitrogen regulatory IIA protein4e-1063.5
NC_013515:347671:372227372227372685459Streptobacillus moniliformis DSM 12112, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN5e-1063.5
NC_020995:789665:808370808370808831462Enterococcus casseliflavus EC20, complete genomePTS system, fructose subfamily, IIA component6e-1063.2
NC_013016:656000:677234677234677683450Neisseria meningitidis alpha14 chromosome, complete genomenitrogen regulatory IIA protein8e-1062.8
NC_017516:1535904:153770315377031538152450Neisseria meningitidis H44/76 chromosome, complete genomePTS transporter subunit IIA-like nitrogen-regulatory protein PtsN8e-1062.8
NC_017518:828662:844653844653845102450Neisseria meningitidis NZ-05/33 chromosome, complete genomePTS transporter subunit IIA-like nitrogen-regulatory protein PtsN8e-1062.8
NC_013199:392450:4054264054264073691944Lactobacillus rhamnosus Lc 705, complete genomePTS system, fructose-specific IIABC component (fruA-2)1e-0962.4
NC_014484:447889:449153449153449854702Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein1e-0962
NC_017300:1426975:1442403144240314444362034Corynebacterium pseudotuberculosis 1002 chromosome, completePTS system fructose-specific transporter subunit IIABC1e-0962
NC_016932:1414226:1429649142964914316822034Corynebacterium pseudotuberculosis 316 chromosome, complete genomePTS system, manose-specific EIIABC component1e-0962
NC_013956:2592378:260031726003172600778462Pantoea ananatis LMG 20103 chromosome, complete genomeFryA3e-0961.2
NC_019908:1512622:153162015316201532084465Brachyspira pilosicoli P43/6/78 chromosome, complete genomePTS system fructose subfamily transporter subunit IIC3e-0960.8
NC_002951:2208813:221253022125302212964435Staphylococcus aureus subsp. aureus COL, complete genomePTS system, mannitol-specific IIA component1e-0859.3
NC_017341:2303005:230672223067222307156435Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, MtlA_11e-0859.3
NC_014484:447889:449844449844450299456Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein1e-0859.3
NC_013517:3385166:340146234014623401920459Sebaldella termitidis ATCC 33386, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN2e-0858.5
NC_003210:403743:419544419544420002459Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-0858.2
NC_012526:2483000:2505755250575525082382484Deinococcus deserti VCD115, complete genomeputative phosphoenolpyruvate-protein phosphotransferase3e-0857.8
NC_013316:2585666:260693926069392607361423Clostridium difficile R20291, complete genomePTS system, mannitol-specific IIa component4e-0857.4
NC_013315:2505792:252638325263832526805423Clostridium difficile CD196 chromosome, complete genomePTS system mannitol-specific transporter subunit IIA4e-0857.4
NC_017179:2513804:253439525343952534817423Clostridium difficile BI1, complete genomePTS system mannitol-specific transporter subunit IIA4e-0857.4
NC_013766:417991:433794433794434252459Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein4e-0857.4
NC_013768:418000:433815433815434273459Listeria monocytogenes 08-5923, complete genomehypothetical protein4e-0857.4
NC_014363:8228:170481704817506459Olsenella uli DSM 7084 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN4e-0857.4
NC_009656:5185704:518963551896355190099465Pseudomonas aeruginosa PA7 chromosome, complete genomenitrogen regulatory IIA protein3e-0857.4
NC_010842:2919108:293816229381622938623462Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeProtein-N(pi)-phosphohistidine-sugar phosphotransferase, subunit A4e-0857
NC_010602:2911823:292977629297762930237462Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'PTS system, IIA component4e-0857
NC_014039:15236:231912319123667477Propionibacterium acnes SK137 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 25e-0857
NC_015761:2373967:2399144239914424016392496Salmonella bongori NCTC 12419, complete genomephosphoenolpyruvate-protein phosphotransferase6e-0856.6
NC_016511:15100:230552305523531477Propionibacterium acnes TypeIA2 P.acn31 chromosome, completePTS system galactitol-specific transporter subunit IIA7e-0856.2
NC_006085:15246:232012320123677477Propionibacterium acnes KPA171202, complete genomePTS system, galactitol-specific IIA component1e-0755.8
NC_016512:15102:230572305723533477Propionibacterium acnes TypeIA2 P.acn17 chromosome, completePTS system galactitol-specific transporter subunit IIA1e-0755.8
NC_016516:15102:230572305723533477Propionibacterium acnes TypeIA2 P.acn33 chromosome, completePTS system galactitol-specific transporter subunit IIA1e-0755.8
NC_009617:234782:2490212490212519452925Clostridium beijerinckii NCIMB 8052 chromosome, complete genomesigma-54 factor interaction domain-containing protein3e-0754.7
NC_009617:263060:280258280258280698441Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 23e-0754.3
NC_003143:398748:4217584217584243162559Yersinia pestis CO92, complete genomeputative phosphoenolpyruvate-protein phosphotransferase3e-0753.9
NC_008149:318860:3409663409663435242559Yersinia pestis Nepal516, complete genomephosphoenolpyruvate-protein phosphotransferase3e-0753.9
NC_013956:2592378:2594311259431125962181908Pantoea ananatis LMG 20103 chromosome, complete genomeLicR4e-0753.9
NC_014029:452248:4753874753874778162430Yersinia pestis Z176003 chromosome, complete genomeHPr family phosphocarrier protein4e-0753.5
NC_017154:394401:4175394175394199682430Yersinia pestis D106004 chromosome, complete genomeHPr family phosphocarrier protein4e-0753.5
NC_017160:396600:4197394197394221682430Yersinia pestis D182038 chromosome, complete genomeHPr family phosphocarrier protein4e-0753.5
NC_010159:1558000:1573109157310915742421134Yersinia pestis Angola, complete genomephosphocarrier, HPr family7e-0753.1
NC_008149:3022970:3025620302562030267531134Yersinia pestis Nepal516, complete genomehypothetical protein7e-0753.1
NC_010634:1565788:1581587158158715827201134Yersinia pseudotuberculosis PB1/+, complete genomeHPr family phosphocarrier protein7e-0753.1
NC_005810:1413305:1415955141595514170881134Yersinia pestis biovar Microtus str. 91001, complete genomebifunctional fructose-specific PTS IIA/HPr protein7e-0753.1
NC_002662:30922:329073290733338432Lactococcus lactis subsp. lactis Il1403, complete genomemannitol-specific PTS system IIA component7e-0753.1
NC_009708:3035798:3038448303844830395811134Yersinia pseudotuberculosis IP 31758 chromosome, complete genomebifunctional PTS system fructose-specific transporter subunit IIA/HPr protein7e-0753.1
NC_009004:25988:303583035830789432Lactococcus lactis subsp. cremoris MG1363, complete genomePTS system, mannitol-specific IIA component7e-0753.1
NC_010465:3046904:3049554304955430506871134Yersinia pseudotuberculosis YPIII, complete genomephosphocarrier, HPr family7e-0753.1
NC_003143:1441211:1456994145699414581271134Yersinia pestis CO92, complete genomehypothetical protein7e-0753.1
NC_006155:1567306:1583090158309015842231134Yersinia pseudotuberculosis IP 32953, complete genomePTS system, fructose-specific II component / phosphocarrier p...7e-0753.1
NC_017265:2807302:2809952280995228110851134Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,IIA and HPr components of fructose-specific PTS enzyme7e-0753.1
NC_017168:4363000:4379062437906243801951134Yersinia pestis A1122 chromosome, complete genomebifunctional PTS system fructose-specific transporter subunit IIA/HPr protein7e-0753.1
NC_017160:1299733:1302191130219113033241134Yersinia pestis D182038 chromosome, complete genomehypothetical protein7e-0753.1
NC_017154:1454704:1470488147048814716211134Yersinia pestis D106004 chromosome, complete genomehypothetical protein7e-0753.1
NC_014029:1512605:1528380152838015295131134Yersinia pestis Z176003 chromosome, complete genomehypothetical protein7e-0753.1
NC_009381:2731965:2734615273461527357481134Yersinia pestis Pestoides F chromosome, complete genomebifunctional PTS system fructose-specific transporter subunit IIA/HPr protein7e-0753.1
NC_004088:3186954:3189604318960431907371134Yersinia pestis KIM, complete genomePTS system, fructose-specific IIA/fpr component7e-0753.1
NC_008150:1147883:1163094116309411642271134Yersinia pestis Antiqua, complete genomehypothetical protein7e-0753.1
NC_007332:642000:6420216420216440031983Mycoplasma hyopneumoniae 7448, complete genomePTS system, fructose-specific IIABC component9e-0752.8
NC_007295:618830:6188306188306208121983Mycoplasma hyopneumoniae J, complete genomePTS system, fructose-specific IIABC component1e-0652.4
NC_020244:1264500:1273750127375012756961947Bacillus subtilis XF-1, complete genometranscriptional regulator1e-0652
NC_009725:2517428:2538466253846625404181953Bacillus amyloliquefaciens FZB42, complete genomeManR2e-0651.6
NC_005955:173436:1734361734361759492514Bartonella quintana str. Toulouse, complete genomeMultiphosphoryl transfer protein (mtp)2e-0651.6
NC_014976:3469395:3483227348322734851731947Bacillus subtilis BSn5 chromosome, complete genometranscriptional antiterminator2e-0651.6
NC_017195:1230485:1247625124762512495711947Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeHTH domain family2e-0651.6
NC_014121:3553809:3554507355450735556371131Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebifunctional fructose-specific PTS IIA/HPr protein2e-0651.6
NC_019842:2575000:2592489259248925944411953Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,licABCH operon regulator3e-0650.8
NC_006360:605197:6069526069526089341983Mycoplasma hyopneumoniae 232, complete genomeputattive pts system, fructose-specific IIABC component3e-0650.8
NC_020272:1384525:1384525138452513864771953Bacillus amyloliquefaciens IT-45, complete genomeputative licABCH operon regulator3e-0650.8
NC_021182:3771523:378625237862523786719468Clostridium pasteurianum BC1, complete genomephosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type)5e-0650.1