Pre_GI: BLASTP Hits

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Query: NC_013198:394000:407068 Lactobacillus rhamnosus GG, complete genome

Start: 407068, End: 408117, Length: 1050

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012926:140000:1772901772901786361347Streptococcus suis BM407 chromosome, complete genomePTS system ascorbate-specific transporter subunit IIC3e-111401
NC_012467:1997484:1997484199748419988301347Streptococcus pneumoniae P1031, complete genomeascorbate-specific PTS system enzyme IIC5e-105380
NC_006510:2044347:2062478206247820638811404Geobacillus kaustophilus HTA426, complete genomeascorbate-specific PTS system enzyme IIC4e-101368
NC_013508:3188978:3192899319289931941551257Edwardsiella tarda EIB202, complete genomeascorbate-specific PTS system enzyme IIC1e-97356
NC_009053:1942973:1946399194639919477541356Actinobacillus pleuropneumoniae L20, complete genomeascorbate-specific permease IIC component UlaA1e-96353
NC_004431:279868:3059433059433071991257Escherichia coli CFT073, complete genomeascorbate-specific PTS system enzyme IIC1e-96353
NC_003143:3115933:3115933311593331171891257Yersinia pestis CO92, complete genomeascorbate-specific PTS system enzyme IIC2e-96352
NC_017154:3188795:3207034320703432082901257Yersinia pestis D106004 chromosome, complete genomePTS system ascorbate-specific transporter subunit IIC2e-96352
NC_017168:2626996:2645235264523526464911257Yersinia pestis A1122 chromosome, complete genomePTS system ascorbate-specific transporter subunit IIC2e-96352
NC_014029:3245778:3264253326425332652751023Yersinia pestis Z176003 chromosome, complete genomemembrane protein2e-96352
NC_015224:3225000:3225821322582132270771257Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,ascorbate-specific PTS system enzyme IIC5e-96351
NC_009648:1914621:1927029192702919282911263Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeascorbate-specific PTS system enzyme IIC4e-96351
NC_012731:2650603:2663009266300926642711263Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomePTS system ascorbate-specific transporter subunit IIC4e-96351
NC_016845:2691129:2703556270355627048181263Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,PTS system ascorbate-specific transporter subunit IIC4e-96351
NC_020181:969599:9758739758739771351263Enterobacter aerogenes EA1509E, complete genomePutative integral membrane protein9e-96350
NC_015663:4447984:4459956445995644612181263Enterobacter aerogenes KCTC 2190 chromosome, complete genomePTS system ascorbate-specific transporter subunit IIC9e-96350
NC_013850:2685835:2692180269218026934421263Klebsiella variicola At-22 chromosome, complete genomeputative sugar-specific permease SgaT/UlaA7e-96350
NC_008800:1459015:1478953147895314802091257Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,PTS system ascorbate-specific transporter subunit IIC6e-96350
NC_014228:2812000:2830995283099528322511257Xenorhabdus nematophila ATCC 19061, complete genomePTS family enzyme IIC, ascorbate-specific1e-92340
CP002797:4603787:461672146167214617608888Escherichia coli NA114, complete genomePutative integral membrane protein3e-91335
NC_011899:2165814:2176340217634021776051266Halothermothrix orenii H 168, complete genomeputative sugar-specific permease SgaT/UlaA2e-85315
NC_006582:1017000:1027798102779810290721275Bacillus clausii KSM-K16, complete genomeascorbate-specific PTS system enzyme IIC1e-74280
NC_017317:134671:1355131355131370541542Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein3e-71269
NC_013517:1529765:1542087154208715433551269Sebaldella termitidis ATCC 33386, complete genomeputative sugar-specific permease SgaT/UlaA2e-71269
NC_007633:696604:7021337021337039411809Mycoplasma capricolum subsp. capricolum ATCC 27343, completePTS system, IIBC component, putative5e-69261
NC_006085:481231:4912194912194928081590Propionibacterium acnes KPA171202, complete genomeascorbate-specific PTS system enzyme IIC9e-68257
NC_016511:472666:4826574826574842461590Propionibacterium acnes TypeIA2 P.acn31 chromosome, completePTS system ascorbate-specific transporter subunit IIC8e-68257
NC_016516:463460:4734544734544750431590Propionibacterium acnes TypeIA2 P.acn33 chromosome, completePTS system ascorbate-specific transporter subunit IIC8e-68257
NC_014039:499233:5092215092215108101590Propionibacterium acnes SK137 chromosome, complete genomehypothetical protein7e-68257
NC_012806:105133:1051331051331066591527Mycoplasma conjunctivae, complete genomeTransport protein8e-62237
NC_013411:2975364:2985526298552629868211296Geobacillus sp. Y412MC61, complete genomeputative sugar-specific permease SgaT/UlaA8e-62237
NC_014915:2092678:2125457212545721267521296Geobacillus sp. Y412MC52 chromosome, complete genomePTS system Galactitol-specific IIC component8e-62237
NC_015389:114469:1306861306861319781293Coriobacterium glomerans PW2 chromosome, complete genomePTS system IIC component, L-Asc family2e-61236
NC_021171:4588792:4631370463137046326591290Bacillus sp. 1NLA3E, complete genomePTS system ascorbate-specific transporter subunit IIC4e-60232
NC_003210:2721559:2721559272155927228571299Listeria monocytogenes EGD-e, complete genomeascorbate-specific PTS system enzyme IIC6e-58224
NC_014376:2766326:2770453277045327717211269Clostridium saccharolyticum WM1 chromosome, complete genomeSgaT protein5e-56218
NC_014831:2201246:2212473221247322137561284Thermaerobacter marianensis DSM 12885 chromosome, complete genomeputative sugar-specific permease SgaT/UlaA1e-55217
NC_010999:349252:3492523492523505381287Lactobacillus casei, complete genomePTS system, IIC component2e-54213
NC_014334:369974:3725243725243738101287Lactobacillus casei str. Zhang chromosome, complete genomehypothetical protein8e-54211
NC_013364:5083949:5112043511204351134401398Escherichia coli O111:H- str. 11128, complete genomePTS system L-ascorbate-specific transporter subunit IIC UlaA2e-33143
NC_012880:135508:1355081355081372711764Dickeya dadantii Ech703, complete genomeputative sugar-specific permease SgaT/UlaA1e-32140
NC_015637:669593:6695936695936714371845Vibrio anguillarum 775 chromosome chromosome II, complete sequencePTS system, 3-keto-L-gulonate specific IIB1e-32140
NC_012912:325913:3453263453263470711746Dickeya zeae Ech1591, complete genomeputative sugar-specific permease SgaT/UlaA1e-32140
NC_017243:517684:5362445362445372661023Brachyspira intermedia PWS/A chromosome, complete genomePTS system ascorbate-specific transporter subunit IIC2e-23110
NC_014921:22828:2684626846289842139Mycoplasma fermentans M64 chromosome, complete genometransport protein sgat3e-1066.6
NC_004432:936500:9443159443159458681554Mycoplasma penetrans HF-2, complete genomeascorbate-specific PTS system enzyme IIC9e-0754.7