Pre_GI: BLASTP Hits

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Query: NC_013198:1030970:1047474 Lactobacillus rhamnosus GG, complete genome

Start: 1047474, End: 1048349, Length: 876

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011027:1153592:116698311669831167867885Chlorobaculum parvum NCIB 8327, complete genomeprotein of unknown function DUF3443e-74278
NC_003552:3092456:3102716310271631037231008Methanosarcina acetivorans C2A, complete genomehypothetical protein3e-71268
NC_003901:3698164:3721178372117837222211044Methanosarcina mazei Go1, complete genomehypothetical protein1e-69263
NC_020389:3106847:3117261311726131186101350Methanosarcina mazei Tuc01, complete genomehypothetical protein2e-69262
NC_013037:5263272:529151452915145292407894Dyadobacter fermentans DSM 18053, complete genomePolyphosphate:AMP phosphotransferase2e-68259
NC_010376:1711182:171204617120461712909864Finegoldia magna ATCC 29328, complete genomehypothetical protein4e-68258
NC_014391:6749156:675390567539056754765861Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein2e-51202
NC_016887:5607272:561102356110235611868846Nocardia cyriacigeorgica GUH-2, complete genomeputative Polyphosphate kinase 2 superfamily protein2e-50199
NC_012526:131000:146716146716147516801Deinococcus deserti VCD115, complete genomeputative Polyphosphate kinase 2 family protein1e-46187
NC_015161:2018493:202700720270072027840834Deinococcus proteolyticus MRP chromosome, complete genomepolyphosphate:nucleotide phosphotransferase, PPK2 family6e-46184
NC_014759:2438492:245284524528452453576732Marivirga tractuosa DSM 4126 chromosome, complete genomehypothetical protein2e-42172
NC_015312:3675148:369540336954033696260858Pseudonocardia dioxanivorans CB1190 chromosome, complete genomepolyphosphate:nucleotide phosphotransferase2e-38159
NC_003901:3544712:3560598356059835620521455Methanosarcina mazei Go1, complete genomehypothetical protein2e-34146
NC_020389:2996978:3009488300948830109421455Methanosarcina mazei Tuc01, complete genomehypothetical protein1e-33143
NC_013171:1677543:1697278169727816987561479Anaerococcus prevotii DSM 20548, complete genomeprotein of unknown function DUF3447e-29127
NC_011901:491783:5166675166675181541488Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein2e-27123
NC_012808:921985:939430939430940272843Methylobacterium extorquens AM1, complete genomehypothetical protein3e-26119
NC_008319:1119076:111907611190761119948873Synechococcus sp. CC9311, complete genomePvdS3e-26119
NC_014313:2059933:206777420677742068601828Hyphomicrobium denitrificans ATCC 51888 chromosome, completeprotein of unknown function DUF3444e-26119
NC_016027:346768:356752356752357744993Gluconacetobacter xylinus NBRC 3288, complete genomehypothetical protein4e-26118
NC_008278:6717485:671914367191436719976834Frankia alni ACN14a, complete genomehypothetical protein6e-26118
NC_011757:4293000:432301343230134323855843Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF3441e-25117
NC_016906:4562874:458022845802284581079852Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative polyphosphate kinase, PPK2 family2e-25116
NC_007493:1672163:171466817146681715552885Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencehypothetical protein2e-25116
NC_011772:1684404:168902716890271689830804Bacillus cereus G9842, complete genomeUDP-galactose-lipid carrier transferase3e-25115
NC_008391:404388:428522428522429472951Burkholderia cepacia AMMD chromosome 2, complete sequenceprotein of unknown function DUF3444e-25115
NC_015740:2587323:2590054259005425915531500Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein5e-25115
NC_004129:5723787:5746261574626157473401080Pseudomonas fluorescens Pf-5, complete genomepvdS8e-25114
NC_008601:1560482:156048215604821561291810Francisella tularensis subsp. novicida U112, complete genomehypothetical protein5e-25114
NC_008369:514995:530802530802531611810Francisella tularensis subsp. holarctica OSU18, complete genomehypothetical protein5e-25114
NC_007880:508407:527080527080527889810Francisella tularensis subsp. holarctica, complete genomehypothetical protein5e-25114
NC_008245:1625715:162571516257151626524810Francisella tularensis subsp. tularensis FSC 198, complete genomehypothetical protein5e-25114
NC_010677:353839:372346372346373155810Francisella tularensis subsp. mediasiatica FSC147, complete genomepolyphosphate kinase 25e-25114
NC_006570:1625909:162590916259091626718810Francisella tularensis subsp. tularensis Schu 4, complete genomehypothetical protein5e-25114
NC_009257:338994:357662357662358471810Francisella tularensis subsp. tularensis WY96-3418 chromosome,hypothetical protein5e-25114
NC_016937:1625752:162575216257521626561810Francisella tularensis subsp. tularensis TI0902 chromosome,UDP-galactose-lipid carrier transferase5e-25114
NC_007511:2072838:209876920987692099719951Burkholderia sp. 383 chromosome 2, complete sequenceprotein of unknown function DUF3441e-24113
NC_017093:835260:8401838401838411841002Actinoplanes missouriensis 431, complete genomeputative polyphosphate kinase1e-23110
NC_008313:2142397:215422921542292155026798Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical protein2e-23110
NC_015422:3493396:350407335040733504933861Alicycliphilus denitrificans K601 chromosome, complete genomepolyphosphate kinase 21e-22107
NC_008820:1197898:120114312011431202072930Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein2e-22106
NC_005071:866468:880059880059880988930Prochlorococcus marinus str. MIT 9313, complete genomehypothetical protein2e-22106
NC_008782:1566172:157002215700221570867846Acidovorax sp. JS42, complete genomeprotein of unknown function DUF3442e-22106
NC_017192:20404:317023170232460759Arcobacter sp. L, complete genomehypothetical protein4e-22105
NC_008782:2857899:286171328617132862576864Acidovorax sp. JS42, complete genomeprotein of unknown function DUF3449e-22104
NC_015422:2858228:286355728635572864420864Alicycliphilus denitrificans K601 chromosome, complete genomepolyphosphate kinase 29e-22104
NC_016789:2084805:210159121015912102487897Corynebacterium diphtheriae PW8 chromosome, complete genomepolyphosphate kinase4e-21102
NC_016785:1989695:200506720050672005963897Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomepolyphosphate kinase4e-21102
NC_016800:2058192:207268620726862073582897Corynebacterium diphtheriae BH8 chromosome, complete genomepolyphosphate kinase4e-21102
NC_002935:2059672:207077020707702071666897Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein3e-21102
NC_016786:2017267:202835320283532029249897Corynebacterium diphtheriae HC01 chromosome, complete genomepolyphosphate kinase3e-21102
NC_016787:2009991:202537920253792026275897Corynebacterium diphtheriae HC03 chromosome, complete genomepolyphosphate kinase3e-21102
NC_016788:2007721:201880920188092019705897Corynebacterium diphtheriae HC04 chromosome, complete genomepolyphosphate kinase3e-21102
NC_016788:2054739:206582720658272066723897Corynebacterium diphtheriae HC04 chromosome, complete genomepolyphosphate kinase3e-21102
NC_016790:1976593:199150319915031992399897Corynebacterium diphtheriae VA01 chromosome, complete genomepolyphosphate kinase3e-21102
NC_016802:2035723:204681620468162047712897Corynebacterium diphtheriae HC02 chromosome, complete genomepolyphosphate kinase3e-21102
NC_012115:691154:712100712100713005906Nautilia profundicola AmH, complete genomepolyphosphate kinase 21e-20100
NC_003911:1791878:184645118464511847356906Silicibacter pomeroyi DSS-3, complete genomepolyphosphate kinase 2, putative3e-2099.4
NC_009952:749426:761970761970762914945Dinoroseobacter shibae DFL 12, complete genomeprotein of unknown function DUF3443e-1995.9
NC_016812:152831:170895170895171797903Sinorhizobium fredii HH103, complete genomehypothetical protein3e-1995.9
NC_011886:177039:195646195646196578933Arthrobacter chlorophenolicus A6, complete genomeprotein of unknown function DUF3443e-1686.3