Pre_GI: BLASTP Hits

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Query: NC_013093:1411882:1412633 Actinosynnema mirum DSM 43827, complete genome

Start: 1412633, End: 1413622, Length: 990

Host Lineage: Actinosynnema mirum; Actinosynnema; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolation: Blade of grass from Raritan River NJ; Country: USA; Temp: Mesophile; Temp: 10-30C; Habitat: Soil. This bacterium produces the antibiotic nocardicin A. Soil dwelling, nonmotile aerobe it has fine hyphae which form aerial and substrate mycelia. Motile spores are borne on synnemata, compact groups of erect hyphae. It produces nocardicin antibiotics and is able to inhibit growth of several Gram-positive bacteria as well as some filamentous fungi and yeasts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009338:5161886:516373951637395164668930Mycobacterium gilvum PYR-GCK chromosome, complete genomeRNA polymerase sigma factor SigJ8e-59227
NC_013929:9038500:903995490399549040901948Streptomyces scabiei 87.22 chromosome, complete genomesigma factor2e-39163
NC_013947:2113941:214394221439422144847906Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRNA polymerase sigma-24 subunit, ECF subfamily1e-37157
NC_010515:1618093:162184016218401622727888Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily4e-37155
NC_011963:1979136:199767119976711998531861Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceRNA polymerase sigma factor SigJ1e-36154
NC_008061:2548849:255260425526042553491888Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily7e-37154
NC_008543:2696377:271349727134972714384888Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily7e-37154
NC_012988:4353000:435999343599934360955963Methylobacterium extorquens DM4, complete genomeRNA polymerase sigma factor2e-36153
NC_015312:1191633:120925612092561210143888Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-36152
NC_009921:3384116:338747933874793388363885Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-35149
NC_016582:389729:408355408355409278924Streptomyces bingchenggensis BCW-1 chromosome, complete genomeECF subfamily RNA polymerase sigma factor2e-35149
NC_011891:4450031:447536544753654476306942Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-34145
NC_007777:2964500:298966629896662990505840Frankia sp. CcI3, complete genomesigma-241e-33144
NC_003888:6853107:686230768623076863275969Streptomyces coelicolor A3(2), complete genomesigma factor2e-33143
NC_013729:1556922:157591315759131576869957Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-33142
NC_016109:3963189:396631339663133967236924Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor4e-33142
NC_006361:498305:511298511298512179882Nocardia farcinica IFM 10152, complete genomeputative sigma factor8e-33141
NC_016935:1365463:137867613786761379554879Paenibacillus mucilaginosus 3016 chromosome, complete genomeECF family RNA polymerase sigma factor3e-32139
NC_009953:3552738:355452635545263555413888Salinispora arenicola CNS-205 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor2e-32139
NC_018681:2985078:300081030008103001703894Nocardia brasiliensis ATCC 700358 chromosome, complete genomeputative Sigma factor, sigma 70 type, group 4 (ECF)7e-32137
NC_013595:4031947:403803340380334038914882Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-32137
NC_015690:3941113:395186339518633952741879Paenibacillus mucilaginosus KNP414 chromosome, complete genomeECF family RNA polymerase sigma factor2e-31136
NC_017904:2641270:266192226619222662830909Mycobacterium sp. MOTT36Y chromosome, complete genomeECF family RNA polymerase sigma factor7e-30131
NC_020126:2216926:223261622326162233497882Myxococcus stipitatus DSM 14675, complete genomeECF family RNA polymerase sigma factor3e-29129
NC_002944:2373873:239794423979442398834891Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein4e-29129
NC_013729:2813895:281389528138952814809915Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-28127
NC_013729:2157785:215778521577852158747963Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-27124
NC_014211:174694:178206178206179093888Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidRNA polymerase, sigma-24 subunit, ECF subfamily4e-27122
NC_015656:381554:400378400378400803426Frankia symbiont of Datisca glomerata chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-25117
NC_013947:1011899:103481410348141035695882Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRNA polymerase sigma-24 subunit, ECF subfamily1e-25117
NC_016582:389729:400537400537401454918Streptomyces bingchenggensis BCW-1 chromosome, complete genomeRNA polymerase sigma factor4e-23108
NC_013510:5394432:542642554264255427285861Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-22107
NC_016582:389729:399584399584400495912Streptomyces bingchenggensis BCW-1 chromosome, complete genomeRNA polymerase sigma factor1e-1481.3
NC_016935:4038265:405515440551544056110957Paenibacillus mucilaginosus 3016 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1377.8
NC_003888:7866148:788926678892667890168903Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma factor3e-1376.6
NC_012988:4353000:436675543667554367414660Methylobacterium extorquens DM4, complete genome3e-1273.2
NC_014666:4419693:4438717443871744400121296Frankia sp. EuI1c chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1170.1
NC_013510:4319296:433794943379494338947999Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-1168.2
NC_014815:5888934:589354558935455894543999Micromonospora sp. L5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily2e-1067
NC_017186:6817904:683778768377876838761975Amycolatopsis mediterranei S699 chromosome, complete genomeRNA polymerase factor sigma-705e-1065.5
NC_014318:6817860:683774368377436838723981Amycolatopsis mediterranei U32 chromosome, complete genomeRNA polymerase sigma-70 factor, ECF subfamily7e-1065.1
NC_012914:5225609:523278752327875233743957Paenibacillus sp. JDR-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0963.2
NC_016109:327826:348659348659349585927Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor5e-0858.9
NC_014666:5449884:545245454524545453449996Frankia sp. EuI1c chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0757.8
NC_016803:1646342:166923316692331669781549Desulfovibrio desulfuricans ND132 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-0755.8