Pre_GI: BLASTP Hits

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Query: NC_013037:2906730:2909792 Dyadobacter fermentans DSM 18053, complete genome

Start: 2909792, End: 2910562, Length: 771

Host Lineage: Dyadobacter fermentans; Dyadobacter; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: Isolation: Surface sterilized stems from Zea mays; Country: USA; Temp: Mesophile; Temp: 28C; Habitat: Host, Soil. Dyadobacter fermentans is a non-nitrogen-fixing bacterium isolated in an attempt to characterize the bacterial community that exists endophytically with Zea mays grown on a nitrogen-limited medium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013730:2490000:250045225004522501119668Spirosoma linguale DSM 74, complete genome4e-0755.1
NC_007677:324000:344731344731345489759Salinibacter ruber DSM 13855, complete genomealginate biosynthesis regulatory protein1e-1480.5
NC_018868:2615822:263686726368672637601735Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomealginate biosynthesis regulatory protein AlgR7e-1167.8
NC_020126:5152359:516493051649305165715786Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator4e-1995.5
NC_020126:7686076:768779776877977688558762Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator3e-0858.9
NC_010520:3580000:359767035976703598434765Clostridium botulinum A3 str. Loch Maree, complete genomeDNA-binding response regulator, LytTr family3e-1272.4
NC_017297:3594000:361271236127123613476765Clostridium botulinum F str. 230613 chromosome, complete genomeDNA-binding response regulator, LytTr family3e-1168.9
NC_009495:3502000:352046735204673521231765Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding response regulator, LytTr family3e-1272.4
NC_012563:3729817:376253737625373763301765Clostridium botulinum A2 str. Kyoto, complete genomeDNA-binding response regulator, LytTr family6e-1168.2
NC_002695:2893951:289323528932352893954720Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1376.6
NC_013941:2928000:296958729695872970321735Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-1067
NC_009778:1070000:108629010862901087015726Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1170.5
NC_014624:828943:848383848383849072690Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-0652.4
NC_009792:642881:644563644563645282720Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-1375.5
NC_015726:3452232:345363334536333454394762Cupriavidus necator N-1 chromosome 1, complete sequenceLytR family transcriptional regulator1e-1790.5
NC_020126:7285452:730537573053757306187813Myxococcus stipitatus DSM 14675, complete genomeLyTR family two component transcriptional regulator3e-1272.4
NC_015311:403281:438961438961439716756Prevotella denticola F0289 chromosome, complete genomeLytTr DNA-binding domain-containing protein2e-0756.6
NC_015589:2281054:228878522887852289513729Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeLytTr DNA-binding protein2e-0756.2
NC_013061:1856969:187473818747381875517780Pedobacter heparinus DSM 2366, complete genomeLytTr DNA-binding region1e-1583.6
NC_009699:3581376:361409836140983614862765Clostridium botulinum F str. Langeland chromosome, complete genomeLytTr family DNA-binding response regulator3e-1168.9
NC_009697:3463736:349645534964553497219765Clostridium botulinum A str. ATCC 19397 chromosome, completeLytTr family DNA-binding response regulator3e-1272.4
NC_016609:4331359:434517843451784345930753Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator2e-1686.7
NC_009617:648000:666775666775667533759Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeLytTR family two component transcriptional regulator1e-1067
NC_015510:6653159:666073866607386661478741Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator2e-1583.2
NC_014633:837588:857228857228857983756Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator6e-1064.7
NC_015510:1234500:125508212550821255795714Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator3e-0962.8
NC_009616:99647:116610116610117290681Thermosipho melanesiensis BI429 chromosome, complete genomeLytTR family two component transcriptional regulator6e-0858.2
NC_015703:4483500:449270544927054493430726Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator8e-0754.3
NC_016822:2678691:270562327056232706357735Shigella sonnei 53G, complete genomeLytTR family two component transcriptional regulator1e-1067
NC_015167:313506:335892335892336584693Cellulophaga lytica DSM 7489 chromosome, complete genomeLytTR family two component transcriptional regulator2e-0756.2
NC_016609:2951301:298003529800352980781747Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator1e-1583.6
NC_016609:5890292:591878759187875919545759Niastella koreensis GR20-10 chromosome, complete genomeLytTR family two component transcriptional regulator2e-1479.7
NC_016902:1419413:142028314202831421017735Escherichia coli KO11FL chromosome, complete genomeLytTR family two component transcriptional regulator1e-1067
NC_014633:583858:604072604072604797726Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator9e-1063.9
NC_015703:2693463:270975827097582710495738Runella slithyformis DSM 19594 chromosome, complete genomeLytTR family two component transcriptional regulator4e-0858.5
NC_015510:1234500:125002412500241250725702Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeLytTR family two component transcriptional regulator5e-0651.6
NC_008258:2473000:249696424969642497698735Shigella flexneri 5 str. 8401, complete genomeputative 2-component transcriptional regulator1e-1067
NC_004337:2478461:250322425032242503958735Shigella flexneri 2a str. 301, complete genomeputative 2-component transcriptional regulator1e-1067
NC_013222:3060482:306243030624303063287858Robiginitalea biformata HTCC2501, complete genomeputative response regulator5e-46184
NC_015856:3536441:356048135604813561233753Collimonas fungivorans Ter331 chromosome, complete genomeputative two-component response regulator transcription protein1e-1480.1
NC_011750:919953:938353938353939072720Escherichia coli IAI39 chromosome, complete genomeputative two-component response-regulatory protein YehT1e-1376.6
NC_016776:2237404:224442922444292245127699Bacteroides fragilis 638R, complete genomeputative two-component system response regulator1e-0963.5
NC_003228:2245181:225199322519932252691699Bacteroides fragilis NCTC 9343, complete genomeputative two-component system response regulator1e-0963.5
NC_016776:3798108:379737437973743798111738Bacteroides fragilis 638R, complete genomeputative two-component system, response regulator8e-1270.9
NC_003228:3752035:375130137513013752038738Bacteroides fragilis NCTC 9343, complete genomeputative two-component system, response regulator8e-1270.9
NC_004668:3053119:306801830680183068746729Enterococcus faecalis V583, complete genomeresponse regulator3e-1375.5
NC_015687:1811573:181561018156101816371762Clostridium acetobutylicum DSM 1731 chromosome, complete genomeresponse regulator4e-0858.9
NC_010658:2529033:255507825550782555812735Shigella boydii CDC 3083-94, complete genomeresponse regulator1e-1067
NC_018868:2867500:286792228679222868728807Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeresponse regulator9e-1787.4
NC_017316:2581781:259771425977142598442729Enterococcus faecalis OG1RF chromosome, complete genomeresponse regulator5e-1374.7
NC_003030:1811820:181401018140101814771762Clostridium acetobutylicum ATCC 824, complete genomeResponse regulator (CheY-like receiver domain and DNA-binding HTH domain)4e-0858.9
NC_017295:1809386:181342318134231814184762Clostridium acetobutylicum EA 2018 chromosome, complete genomeResponse regulator (CheY-like receiver domain and DNA-binding HTH domain)4e-0858.9
NC_016791:3807740:3806658380665838077521095Clostridium sp. BNL1100 chromosome, complete genomeresponse regulator containing CheY-like receiver and SARP domains2e-0859.3
NC_020272:3187482:3201383320138332024591077Bacillus amyloliquefaciens IT-45, complete genomeresponse regulator MprA2e-0756.2
NC_016751:1700164:172001917200191720765747Marinitoga piezophila KA3 chromosome, complete genomeresponse regulator of the LytR/AlgR family2e-1686.7
NC_019968:1084288:112808911280891128805717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family7e-1581.3
NC_019968:1304450:131481713148171315533717Prevotella dentalis DSM 3688 chromosome 2, complete sequenceresponse regulator of the LytR/AlgR family7e-1581.3
NC_021182:1473535:147521614752161475986771Clostridium pasteurianum BC1, complete genomeresponse regulator of the LytR/AlgR family4e-1168.6
NC_019904:2292954:229453022945302295372843Echinicola vietnamensis DSM 17526 chromosome, complete genomeresponse regulator of the LytR/AlgR family3e-0962
NC_007333:3360000:336380033638003364594795Thermobifida fusca YX, complete genomeresponse regulator receiver2e-0653.1
NC_014219:999648:99964899964810007811134Bacillus selenitireducens MLS10 chromosome, complete genomeresponse regulator receiver and SARP domain protein1e-0757
NC_014393:1421122:1427612142761214287121101Clostridium cellulovorans 743B chromosome, complete genomeresponse regulator receiver and SARP domain-containing protein7e-0754.7
NC_013037:1015210:102330010233001023725426Dyadobacter fermentans DSM 18053, complete genomeresponse regulator receiver protein3e-1995.9
NC_008786:2573558:258760725876072588437831Verminephrobacter eiseniae EF01-2, complete genomeresponse regulator receiver protein1e-1273.6
NC_008536:1778500:179196917919691792745777Solibacter usitatus Ellin6076, complete genomeresponse regulator receiver protein2e-1066.6
NC_019902:498500:511540511540512247708Thioalkalivibrio nitratireducens DSM 14787, complete genomeresponse regulator receiver protein1e-0653.9
NC_014032:338547:361332361332362084753Salinibacter ruber M8 chromosome, complete genomesensory transduction protein lytT5e-1581.6
NC_020054:2033982:205579120557912056564774Fibrella aestuarina BUZ 2 drat genomeSensory transduction protein lytT4e-62237
NC_003901:3544712:356219135621913562697507Methanosarcina mazei Go1, complete genometranscriptional regulator8e-0754.3
NC_006510:1501487:152070415207041521444741Geobacillus kaustophilus HTA426, complete genometranscriptional regulator1e-0963.9
NC_008009:1264791:126479112647911265579789Acidobacteria bacterium Ellin345, complete genometranscriptional regulator, LytR/AlgR family4e-21101
NC_013406:303218:335823335823336587765Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator1e-0860.5
NC_012917:3565268:357072135707213571437717Pectobacterium carotovorum subsp. carotovorum PC1, complete genometwo component transcriptional regulator, LytTR family1e-1377.4
NC_020054:3501467:351843235184323519181750Fibrella aestuarina BUZ 2 drat genometwo component transcriptional regulator, LytTR family3e-1272.4
CP002516:1419413:142028314202831421017735Escherichia coli KO11, complete genometwo component transcriptional regulator, LytTR family1e-1067
NC_014931:4490526:449285444928544493723870Variovorax paradoxus EPS chromosome, complete genometwo component transcriptional regulator, LytTR family1e-1067
NC_013194:1040197:105397910539791054695717Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetwo component transcriptional regulator, LytTR family7e-1064.3
NC_013730:1074393:108006810800681080817750Spirosoma linguale DSM 74, complete genometwo component transcriptional regulator, LytTR family1e-0860.5
NC_014933:1759729:178049017804901781248759Bacteroides helcogenes P 36-108 chromosome, complete genometwo component transcriptional regulator, LytTR family4e-36151
NC_015177:2972701:297270129727012973447747Pedobacter saltans DSM 12145 chromosome, complete genometwo component transcriptional regulator, LytTR family7e-1477.8
NC_012880:1091486:109317110931711093896726Dickeya dadantii Ech703, complete genometwo component transcriptional regulator, LytTR family9e-0960.8
NC_014933:3715467:371826637182663718967702Bacteroides helcogenes P 36-108 chromosome, complete genometwo component transcriptional regulator, LytTR family4e-1478.6
NC_009828:600349:601856601856602527672Thermotoga lettingae TMO, complete genometwo component transcriptional regulator, LytTR family9e-1063.9
NC_013730:2558999:258794825879482588718771Spirosoma linguale DSM 74, complete genometwo component transcriptional regulator, LytTR family8e-0960.8
NC_014152:2849991:286797228679722868697726Thermincola sp. JR, complete genometwo component transcriptional regulator, LytTR family1e-0860.1
NC_014934:11341:366453664537337693Cellulophaga algicola DSM 14237 chromosome, complete genometwo component transcriptional regulator, lyttr family1e-0653.5
NC_014363:1973670:198281319828131983520708Olsenella uli DSM 7084 chromosome, complete genometwo component transcriptional regulator, LytTR family9e-0650.8
NC_013037:6209424:621057962105796211313735Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family3e-21102
NC_013037:5442131:545847354584735459195723Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LytTR family3e-1272
NC_020126:8984500:898947889894788990179702Myxococcus stipitatus DSM 14675, complete genometwo component transcriptional regulator, LytTR family protein8e-22103
NC_016940:470163:502234502234502953720Saprospira grandis str. Lewin chromosome, complete genometwo component transcriptional regulator, LytTR family protein1e-0653.5
NC_015556:4118304:4122397412239741237341338Pseudomonas fulva 12-X chromosome, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family4e-0652
NC_015410:1144272:1157713115771311590531341Pseudomonas mendocina NK-01 chromosome, complete genometwo-component response regulator PilR4e-0652
NC_009439:1075170:1089656108965610909961341Pseudomonas mendocina ymp, complete genometwo-component response regulator PilR1e-0653.5
NC_020260:1111130:112837811283781129103726Cronobacter sakazakii Sp291, complete genometwo-component response-regulatory protein YehT8e-1270.9
NC_013008:2889743:288902728890272889746720Escherichia coli O157:H7 str. TW14359 chromosome, complete genometwo-component response-regulatory protein YehT1e-1376.6
NC_004663:1499145:151426015142601514958699Bacteroides thetaiotaomicron VPI-5482, complete genometwo-component system response regulator2e-0860.1
NC_006347:2190000:219573921957392196437699Bacteroides fragilis YCH46, complete genometwo-component system response regulator1e-0963.5
NC_009615:2311352:231296223129622313666705Parabacteroides distasonis ATCC 8503 chromosome, complete genometwo-component system response regulator5e-0858.5
NC_006347:3843228:384459438445943845331738Bacteroides fragilis YCH46, complete genometwo-component system response regulator8e-1270.9
NC_018721:2872780:287278028727802873505726Psychroflexus torquis ATCC 700755 chromosome, complete genometwo-component system response regulator, LytR/AlgR family3e-1065.9
NC_017025:1735835:174216717421671742898732Flavobacterium indicum GPTSA100-9, complete genomeTwo-component system response regulatory protein, LytTR family3e-0962.4