Pre_GI: BLASTP Hits

Some Help

Query: NC_012988:4353000:4366755 Methylobacterium extorquens DM4, complete genome

Start: 4366755, End: 4367414, Length: 660

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Methylobacterium extorquens DM4 was isolated from soil contaminated with halogenated (chlorine-containing) hydrocarbons. This organism is able to use dichloromethane as a sole carbon and energy source. Dichloromethane, an industrial solvent, is toxic and carcinogenic. This compound is water soluble and can easily contaminate groundwater. Methylobacterium chloromethanicum was isolated from soil at a petrochemical factory in Tatarstan, Russia. This organism is able to grow using chloromethane as the sole carbon and energy source.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:4353000:435999343599934360955963Methylobacterium extorquens DM4, complete genomeRNA polymerase sigma factor6e-31134
NC_011963:1979136:199767119976711998531861Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceRNA polymerase sigma factor SigJ1e-24112
NC_009953:3552738:355452635545263555413888Salinispora arenicola CNS-205 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor2e-1995.5
NC_016582:389729:408355408355409278924Streptomyces bingchenggensis BCW-1 chromosome, complete genomeECF subfamily RNA polymerase sigma factor9e-1993.6
NC_011891:4450031:447536544753654476306942Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1789.7
NC_013729:1556922:157591315759131576869957Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1788.6
NC_013729:2813895:281389528138952814809915Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1583.2
NC_018681:2985078:300081030008103001703894Nocardia brasiliensis ATCC 700358 chromosome, complete genomeputative Sigma factor, sigma 70 type, group 4 (ECF)1e-1582.8
NC_009921:3384116:338747933874793388363885Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1479.7
NC_015312:1191633:120925612092561210143888Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1479.7
NC_016582:389729:400537400537401454918Streptomyces bingchenggensis BCW-1 chromosome, complete genomeRNA polymerase sigma factor2e-1479.3
NC_009338:5161886:516373951637395164668930Mycobacterium gilvum PYR-GCK chromosome, complete genomeRNA polymerase sigma factor SigJ5e-1477.8
NC_013929:9038500:903995490399549040901948Streptomyces scabiei 87.22 chromosome, complete genomesigma factor6e-1477.4
NC_013947:2113941:214394221439422144847906Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRNA polymerase sigma-24 subunit, ECF subfamily9e-1477
NC_007777:2964500:298966629896662990505840Frankia sp. CcI3, complete genomesigma-243e-1375.5
NC_014211:174694:178206178206179093888Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidRNA polymerase, sigma-24 subunit, ECF subfamily5e-1270.9
NC_003888:6853107:686230768623076863275969Streptomyces coelicolor A3(2), complete genomesigma factor8e-1270.5
NC_016109:3963189:396631339663133967236924Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor7e-1270.5
NC_016935:1365463:137867613786761379554879Paenibacillus mucilaginosus 3016 chromosome, complete genomeECF family RNA polymerase sigma factor3e-1168.6
NC_013093:1411882:141263314126331413622990Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-1167.8
NC_015690:3941113:395186339518633952741879Paenibacillus mucilaginosus KNP414 chromosome, complete genomeECF family RNA polymerase sigma factor6e-1167.4
NC_013729:2157785:215778521577852158747963Kribbella flavida DSM 17836, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1065.9
NC_017904:2641270:266192226619222662830909Mycobacterium sp. MOTT36Y chromosome, complete genomeECF family RNA polymerase sigma factor1e-0963.5
NC_008061:2548849:255260425526042553491888Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily1e-0963.5
NC_008543:2696377:271349727134972714384888Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily1e-0963.5
NC_010515:1618093:162184016218401622727888Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily1e-0963.2
NC_013595:4031947:403803340380334038914882Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962.8
NC_002944:2373873:239794423979442398834891Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein5e-0961.2
NC_006361:498305:511298511298512179882Nocardia farcinica IFM 10152, complete genomeputative sigma factor9e-0960.5
NC_013947:1011899:103481410348141035695882Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRNA polymerase sigma-24 subunit, ECF subfamily1e-0860.1
NC_015656:381554:400378400378400803426Frankia symbiont of Datisca glomerata chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-0756.2
NC_020126:2216926:223261622326162233497882Myxococcus stipitatus DSM 14675, complete genomeECF family RNA polymerase sigma factor2e-0652.4