Pre_GI: BLASTN Hits

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Query: NC_012967:707083 Escherichia coli B str. REL606 chromosome, complete genome

Start: 707083, End: 732960, Length: 25878

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
CP002185:79473279473281843123700Escherichia coli W, complete genome017760BLASTN svgBLASTP svg
NC_010468:32093263209326323524825923Escherichia coli ATCC 8739, complete genome017700BLASTN svgBLASTP svg
NC_007384:17633751763375178359920225Shigella sonnei Ss046, complete genome02958BLASTN svgBLASTP svg
NC_007384:27881027881029760818799Shigella sonnei Ss046, complete genome02415BLASTN svgBLASTP svg
NC_010468:2406387*2406387242509318707Escherichia coli ATCC 8739, complete genome02345BLASTN svgBLASTP svg
NC_011751:25683025683028052023691Escherichia coli UMN026 chromosome, complete genome02274BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome02270BLASTN svgBLASTP svg
CU928160:25693225693227863921708Escherichia coli IAI1 chromosome, complete genome02238BLASTN svgBLASTP svg
AC_000091:15219761521976154430422329Escherichia coli W3110 DNA, complete genome02210BLASTN svgBLASTP svg
NC_000913:15170511517051154061423564Escherichia coli K12, complete genome02210BLASTN svgBLASTP svg
NC_010473:16076461607646163120923564Escherichia coli str. K-12 substr. DH10B, complete genome02210BLASTN svgBLASTP svg
NC_011740:14947961494796152042525630Escherichia fergusonii ATCC 35469, complete genome02177BLASTN svgBLASTP svg
NC_002695:26123526123528377222538Escherichia coli O157:H7 str. Sakai, complete genome02097BLASTN svgBLASTP svg
NC_002655:26123626123628140820173Escherichia coli O157:H7 EDL933, complete genome02097BLASTN svgBLASTP svg
NC_011751:68041768041770234121925Escherichia coli UMN026 chromosome, complete genome02012BLASTN svgBLASTP svg
AP010958:60471960471962691322195Escherichia coli O103:H2 str. 12009 DNA, complete genome02006BLASTN svgBLASTP svg
NC_010468:111504*11150413814926646Escherichia coli ATCC 8739, complete genome01947BLASTN svgBLASTP svg
CP002185:39645003964500398613821639Escherichia coli W, complete genome01883BLASTN svgBLASTP svg
CP002516:119935*11993514694827014Escherichia coli KO11, complete genome01883BLASTN svgBLASTP svg
NC_009801:40739684073968409617422207Escherichia coli E24377A, complete genome01869BLASTN svgBLASTP svg
NC_011748:41319244131924415503823115Escherichia coli 55989, complete genome01844BLASTN svgBLASTP svg
CU928145:41319244131924415503823115Escherichia coli 55989 chromosome, complete genome01844BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome01709BLASTN svgBLASTP svg
AP010958:4707712*4707712472598018269Escherichia coli O103:H2 str. 12009 DNA, complete genome01643BLASTN svgBLASTP svg
NC_009800:3787320*3787320380985222533Escherichia coli HS, complete genome01221BLASTN svgBLASTP svg
NC_010102:23228662322866235445731592Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,01181BLASTN svgBLASTP svg
NC_011751:17141311714131174129427164Escherichia coli UMN026 chromosome, complete genome0791BLASTN svgBLASTP svg
NC_006511:20900582090058211818728130Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC0777BLASTN svgBLASTP svg
NC_004631:22058212205821223319827378Salmonella enterica subsp. enterica serovar Typhi Ty2, complete0761BLASTN svgBLASTP svg
NC_011080:78085078085080915728308Salmonella enterica subsp. enterica serovar Newport str. SL254,0753BLASTN svgBLASTP svg
NC_003198:75177975177977932827550Salmonella enterica subsp. enterica serovar Typhi str. CT18,0753BLASTN svgBLASTP svg
NC_003197:77623877623880454628309Salmonella typhimurium LT2, complete genome0753BLASTN svgBLASTP svg
NC_011083:82465982465985295528297Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,0741BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome0726BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome0708BLASTN svgBLASTP svg
NC_007946:25874725874728282624080Escherichia coli UTI89, complete genome0706BLASTN svgBLASTP svg
NC_008253:25705925705928215125093Escherichia coli 536, complete genome0706BLASTN svgBLASTP svg
NC_008563:258725*25872528280524081Escherichia coli APEC O1, complete genome0706BLASTN svgBLASTP svg
NC_012779:2755338*2755338278000524668Edwardsiella ictaluri 93-146, complete genome4e-110406BLASTN svgBLASTP svg
NC_015224:15147471514747154041825672Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-85325BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome5e-79303BLASTN svgBLASTP svg
NC_012559:14975481497548152859931052Laribacter hongkongensis HLHK9, complete genome4e-70274BLASTN svgBLASTP svg
NC_011740:29865142986514300959323080Escherichia fergusonii ATCC 35469, complete genome9e-59236BLASTN svgBLASTP svg
NC_014718:630188*63018865954429357Burkholderia rhizoxinica HKI 454 chromosome, complete genome2e-56228BLASTN svgBLASTP svg
NC_004431:17131411713141173884125701Escherichia coli CFT073, complete genome8e-44186BLASTN svgBLASTP svg
NC_007946:15866561586656161278726132Escherichia coli UTI89, complete genome3e-43184BLASTN svgBLASTP svg
NC_008563:15778791577879160172323845Escherichia coli APEC O1, complete genome3e-43184BLASTN svgBLASTP svg
NC_010002:65900816590081661609926019Delftia acidovorans SPH-1, complete genome4e-36161BLASTN svgBLASTP svg
NC_013716:4824541*4824541484830623766Citrobacter rodentium ICC168, complete genome1e-30143BLASTN svgBLASTP svg
NC_013716:27645502764550279838233833Citrobacter rodentium ICC168, complete genome4e-30141BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome4e-27131BLASTN svgBLASTP svg
NC_013730:58840588408228023441Spirosoma linguale DSM 74, complete genome9e-22113BLASTN svgBLASTP svg
NC_010725:1003760*1003760103039426635Methylobacterium populi BJ001, complete genome9e-22113BLASTN svgBLASTP svg
NC_010682:37450003745000376509920100Ralstonia pickettii 12J chromosome 1, complete sequence4e-21111BLASTN svgBLASTP svg
NC_011149:11106421110642113231521674Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-20109BLASTN svgBLASTP svg
NC_012796:1049034*10490341180099131066Desulfovibrio magneticus RS-1, complete genome2e-19105BLASTN svgBLASTP svg
NC_020211:4168189*4168189419217623988Serratia marcescens WW4, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012912:3853377*3853377389607042694Dickeya zeae Ech1591, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010468:4252940*4252940428159928660Escherichia coli ATCC 8739, complete genome1e-1489.7BLASTN svgBLASTP svg
CP002797:4411763*4411763444042528663Escherichia coli NA114, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_011894:200928*20092822402523098Methylobacterium nodulans ORS 2060, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_011206:18732971873297189165018354Acidithiobacillus ferrooxidans ATCC 53993, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007606:4182188*4182188420162219435Shigella dysenteriae Sd197, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_019962:175049717504971870599120103Natrinema pellirubrum DSM 15624, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_002973:27019832701983272478722805Listeria monocytogenes str. 4b F2365, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020063:33525163352516337629223777Enterobacteriaceae bacterium strain FGI 57, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009077:48103794810379483961029232Mycobacterium sp. JLS, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_011080:45430004543000457179028791Salmonella enterica subsp. enterica serovar Newport str. SL254,5e-0867.9BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_006905:22356072235607226436328757Salmonella enterica subsp. enterica serovar Choleraesuis str2e-0765.9BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_003210:27495382749538277261223075Listeria monocytogenes EGD-e, complete genome8e-0763.9BLASTN svgBLASTP svg