Pre_GI: BLASTP Hits

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Query: NC_012967:4473368:4490667 Escherichia coli B str. REL606 chromosome, complete genome

Start: 4490667, End: 4492670, Length: 2004

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CP002797:4603787:4638876463887646408792004Escherichia coli NA114, complete genomePutative glycine betaine transporter BetU01175
NC_012947:3917619:3921444392144439234411998Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecholine/carnitine/betaine transporter01175
NC_017328:1075535:1098152109815211001491998Shigella flexneri 2002017 chromosome, complete genomeputative Choline-glycine betaine transporter01174
NC_009649:94871:9713997139991422004Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,secondary glycine betaine transporter BetU01167
NC_014121:2514544:2542396254239625443931998Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecholine/carnitine/betaine transporter01160
NC_014228:2812000:2828044282804428300381995Xenorhabdus nematophila ATCC 19061, complete genomehigh-affinity choline transport protein (BCCT family)0954
NC_018080:6048516:6092122609212260941071986Pseudomonas aeruginosa DK2 chromosome, complete genomecholine transporter0779
NC_020829:5382500:5385992538599253879681977Pseudomonas denitrificans ATCC 13867, complete genomecholine transporter0761
NC_020829:940692:9676559676559696281974Pseudomonas denitrificans ATCC 13867, complete genomeCholine/carnitine/betaine transporter family protein0758
NC_007645:6407370:6428189642818964301621974Hahella chejuensis KCTC 2396, complete genomeCholine-glycine betaine transporter0735
NC_011750:4947500:4960500496050049617861287Escherichia coli IAI39 chromosome, complete genomebetaine-carnitine-choline transporter family member0710
NC_015497:4683741:4685802468580246877751974Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecholine/carnitine/betaine transporter0667
NC_016901:1885694:1898615189861519005911977Shewanella baltica OS678 chromosome, complete genomecholine/carnitine/betaine transporter0645
NC_020211:1621000:1631378163137816334142037Serratia marcescens WW4, complete genomecholine transporter of high affinity2e-130466
NC_017387:1110412:1123342112334211254082067Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomecholine transport protein BetT2e-130466
NC_012917:2921932:2922872292287229249052034Pectobacterium carotovorum subsp. carotovorum PC1, complete genomecholine/carnitine/betaine transporter2e-129463
NC_004547:1970686:1990295199029519923282034Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehigh-affinity choline transport protein2e-129463
NC_020260:1993344:2009842200984220118722031Cronobacter sakazakii Sp291, complete genomecholine transport protein BetT6e-127455
NC_009778:1956225:1980521198052119825512031Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-126452
NC_008563:318993:3570213570213590542034Escherichia coli APEC O1, complete genomehigh-affinity choline transport protein5e-124445
NC_007946:289425:3554293554293574622034Escherichia coli UTI89, complete genomehigh-affinity choline transport protein5e-124445
NC_004431:364000:4199554199554219882034Escherichia coli CFT073, complete genomeHigh-affinity choline transport protein6e-124445
NC_008253:334467:4121224121224141552034Escherichia coli 536, complete genomehigh-affinity choline transport protein7e-124444
NC_011415:351810:3695323695323715652034Escherichia coli SE11 chromosome, complete genomecholine transport protein BetT8e-124444
NC_015581:1891409:1907140190714019091011962Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomecholine/carnitine/betaine transporter1e-122440
NC_015683:2176156:2193646219364621957932148Corynebacterium ulcerans BR-AD22 chromosome, complete genomehigh-affinity choline transport protein2e-115416
NC_014253:431942:4354204354204369971578Methanohalobium evestigatum Z-7303 chromosome, complete genomecholine/carnitine/betaine transporter2e-114413
NC_014550:786692:8048788048788070222145Arthrobacter arilaitensis Re117, complete genomehigh-affinity choline transport protein3e-114412
NC_009633:3522933:3540346354034635421511806Alkaliphilus metalliredigens QYMF chromosome, complete genomecholine/carnitine/betaine transporter5e-100365
NC_017387:1110412:1121602112160211232241623Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeputative choline/carnitine/betaine transporter family protein3e-96353
NC_013159:1422370:1437114143711414388201707Saccharomonospora viridis DSM 43017, complete genomecholine/carnitine/betaine transport2e-94347
NC_015690:2369510:2381557238155723830861530Paenibacillus mucilaginosus KNP414 chromosome, complete genomecholine/carnitine/betaine transporter7e-92338
NC_016935:2918689:2929914292991429314431530Paenibacillus mucilaginosus 3016 chromosome, complete genomecholine/carnitine/betaine transporter8e-91335
NC_013174:23421:2342123421251631743Jonesia denitrificans DSM 20603, complete genomecholine/carnitine/betaine transporter7e-90332
NC_002947:6123608:6125196612519661268991704Pseudomonas putida KT2440, complete genomecholine/carnitine/betaine transporter family protein1e-89331
NC_013159:3423500:3434252343425234358561605Saccharomonospora viridis DSM 43017, complete genomecholine/carnitine/betaine transport1e-89331
NC_009142:2692693:2703133270313327047851653Saccharopolyspora erythraea NRRL 2338, complete genomecholine/carnitine/betaine transporter3e-89330
NC_016745:1719800:1736489173648917381441656Oceanimonas sp. GK1 chromosome, complete genomecholine/carnitine/betaine transporter family protein4e-89329
NC_014210:3170537:3175834317583431776541821Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,choline/carnitine/betaine transporter5e-88325
NC_019978:2189394:2197665219766521991941530Halobacteroides halobius DSM 5150, complete genomecholine/carnitine/betaine transport7e-86318
NC_015733:2581324:2589832258983225913881557Pseudomonas putida S16 chromosome, complete genomecholine/carnitine/betaine transporter family protein8e-84311
NC_009439:3770282:3792928379292837945081581Pseudomonas mendocina ymp, complete genomecholine/carnitine/betaine transporter1e-83311
NC_015497:2997275:3000089300008930017141626Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecholine/carnitine/betaine transporter4e-83309
NC_014328:3066628:3075104307510430765941491Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecholine/carnitine/betaine transporter protein4e-82306
NC_004193:375416:4245804245804260971518Oceanobacillus iheyensis HTE831, complete genomeglycine betaine transporter3e-80300
NC_015690:1109335:1116807111680711181891383Paenibacillus mucilaginosus KNP414 chromosome, complete genomecholine/carnitine/betaine transporter2e-79297
NC_004461:245768:2582902582902598821593Staphylococcus epidermidis ATCC 12228, complete genomeglycine betaine transporter opuD-like protein4e-79296
NC_014328:2990790:3020687302068730221771491Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecholine/carnitine/betaine transporter protein2e-77290
NC_016584:2244966:2260008226000822614771470Desulfosporosinus orientis DSM 765 chromosome, complete genomecholine/carnitine/betaine transport2e-76286
NC_016048:2907702:2992699299269929942671569Oscillibacter valericigenes Sjm18-20, complete genomeglycine betaine transporter4e-75283
NC_014643:2056280:2085660208566020872821623Rothia dentocariosa ATCC 17931 chromosome, complete genomeBCCT family osmoprotectant transporter1e-74281
NC_015556:515641:5195915195915213301740Pseudomonas fulva 12-X chromosome, complete genomecholine/carnitine/betaine transporter2e-74281
NC_016943:1560000:1574215157421515760261812Blastococcus saxobsidens DD2, complete genomeglycine betaine transporter opuD2e-74280
NC_016790:1702856:1718865171886517206911827Corynebacterium diphtheriae VA01 chromosome, complete genomeectoine, glycine betaine and proline transport system membrane protein3e-74280
NC_016788:1730458:1746468174646817482941827Corynebacterium diphtheriae HC04 chromosome, complete genomeectoine, glycine betaine and proline transport system membrane protein3e-74280
NC_016787:1726978:1742988174298817448141827Corynebacterium diphtheriae HC03 chromosome, complete genomeectoine, glycine betaine and proline transport system membrane protein3e-74280
NC_002935:1763886:1781790178179017836161827Corynebacterium diphtheriae NCTC 13129, complete genomeEctoine, glycine betaine and proline transport system membrane protein8e-74278
NC_016783:1758319:1774340177434017761661827Corynebacterium diphtheriae INCA 402 chromosome, complete genomeectoine, glycine betaine and proline transport system membrane protein8e-74278
NC_016789:1805503:1822960182296018247861827Corynebacterium diphtheriae PW8 chromosome, complete genomeectoine, glycine betaine and proline transport system membrane protein8e-74278
NC_016799:1787687:1806510180651018083361827Corynebacterium diphtheriae 31A chromosome, complete genomeectoine, glycine betaine and proline transport system membrane protein8e-74278
NC_016802:1709840:1731052173105217328781827Corynebacterium diphtheriae HC02 chromosome, complete genomeectoine, glycine betaine and proline transport system membrane protein8e-74278
NC_013757:3012130:3033257303325730349901734Geodermatophilus obscurus DSM 43160, complete genomecholine/carnitine/betaine transporter3e-73276
NC_016782:1745374:1766614176661417684401827Corynebacterium diphtheriae 241 chromosome, complete genomeectoine, glycine betaine and proline transport system membrane protein2e-72274
NC_016786:1751204:1767214176721417690401827Corynebacterium diphtheriae HC01 chromosome, complete genomeectoine, glycine betaine and proline transport system membrane protein2e-72274
NC_019974:3013338:3028587302858730301851599Natronococcus occultus SP4, complete genomecholine/carnitine/betaine transport1e-57224
NC_014624:2478985:2506019250601925075991581Eubacterium limosum KIST612 chromosome, complete genomecholine/carnitine/betaine transporter1e-49198
NC_016642:1234500:1238805123880512403281524Pseudovibrio sp. FO-BEG1 chromosome, complete genomecholine/carnitine/betaine transporter2e-46187
NC_011138:105196:1087381087381104981761Alteromonas macleodii 'Deep ecotype', complete genomeputative choline-glycine betaine transporter3e-45183
NC_013169:87269:9170691706936941989Kytococcus sedentarius DSM 20547, complete genomecholine/carnitine/betaine transport2e-44180
NC_016745:1472000:1480642148064214822131572Oceanimonas sp. GK1 chromosome, complete genomeBCCT transporter2e-38160
NC_013171:75110:7955879558811191562Anaerococcus prevotii DSM 20548, complete genome3e-38160
NC_004193:375416:4985794985795001291551Oceanobacillus iheyensis HTE831, complete genomeglycine betaine transporter7e-38159
NC_008789:350650:3850863850863866901605Halorhodospira halophila SL1, complete genomeBCCT transporter5e-33143
NC_014624:2297000:2302598230259823041211524Eubacterium limosum KIST612 chromosome, complete genomeosmoprotectant transporter2e-32141
NC_016745:1472000:1482453148245314840541602Oceanimonas sp. GK1 chromosome, complete genomeBCCT transporter7e-32139
NC_015856:3436951:3454809345480934564911683Collimonas fungivorans Ter331 chromosome, complete genomeBCCT transporter3e-31137
NC_008740:3259962:3262064326206432636201557Marinobacter aquaeolei VT8, complete genomeBCCT transporter3e-29130
NC_006138:1921424:1937172193717219387071536Desulfotalea psychrophila LSv54, complete genometransport protein1e-27125
NC_012660:2143376:2190795219079521924351641Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transporter-like membrane protein1e-27125
NC_009381:2138625:2154723215472321562041482Yersinia pestis Pestoides F chromosome, complete genomeputative transporter4e-25117
NC_010634:2894631:2913482291348229151281647Yersinia pseudotuberculosis PB1/+, complete genomecyclic nucleotide-binding protein2e-25117
NC_005810:2549680:2568570256857025700511482Yersinia pestis biovar Microtus str. 91001, complete genomeputative transporter2e-25117
NC_006155:2979500:2995550299555029972141665Yersinia pseudotuberculosis IP 32953, complete genomeputative BCCT-family carnitine transporter2e-25117
NC_004088:1851500:1867975186797518696541680Yersinia pestis KIM, complete genomequarternary ammonium transport protein6e-25116
NC_017168:2941938:2958274295827429599201647Yersinia pestis A1122 chromosome, complete genomeputative transporter7e-25116
NC_017160:2787637:2805421280542128070671647Yersinia pestis D182038 chromosome, complete genomeputative BCCT-family transporter7e-25116
NC_017265:1571305:1589089158908915907351647Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative BCCT-family transporter9e-25115
NC_009708:1735903:1755964175596417576101647Yersinia pseudotuberculosis IP 31758 chromosome, complete genometransporter9e-25115
NC_010498:4967724:4970675497067549722161542Escherichia coli SMS-3-5, complete genomeputative carnitine transporter CglC3e-24114
NC_009901:4899535:4903734490373449052931560Shewanella pealeana ATCC 700345, complete genomecholine/carnitine/betaine transporter4e-23110
NC_008319:262894:2778972778972795611665Synechococcus sp. CC9311, complete genomeGlycine betaine transporter5e-22106
NC_014541:643604:6627716627716643451575Ferrimonas balearica DSM 9799 chromosome, complete genomecholine/carnitine/betaine transporter1e-21105
NC_012780:430653:4436754436754452401566Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencebetaine/carnitine transporter, BCCT family5e-1996.7
NC_016844:107382:1188401188401203721533Treponema pallidum subsp. pallidum DAL-1 chromosome, completeBCCT family betaine/carnitine/choline transporter6e-1480.1
NC_017268:107387:1188451188451203771533Treponema pallidum subsp. pallidum str. Chicago chromosome,choline/carnitine/betaine transporter family protein6e-1480.1
NC_021508:107384:1188421188421203741533Treponema pallidum subsp. pallidum SS14, complete genomeBCCT family betaine/carnitine/choline transporter6e-1480.1
NC_000919:107373:1188311188311203631533Treponema pallidum subsp. pallidum str. Nichols, complete genomecarnitine transporter, putative6e-1479.7
NC_010741:107370:1188281188281203601533Treponema pallidum subsp. pallidum SS14, complete genomepossible carnitine transporter6e-1479.7
NC_013174:309943:3138323138323153731542Jonesia denitrificans DSM 20603, complete genomeBCCT transporter3e-1273.9