Pre_GI: BLASTP Hits

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Query: NC_012967:4449576:4466870 Escherichia coli B str. REL606 chromosome, complete genome

Start: 4466870, End: 4467313, Length: 444

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010498:4821519:483881248388124839294483Escherichia coli SMS-3-5, complete genomeDNA polymerase III, chi subunit2e-82303
NC_011742:4795733:481305648130564813499444Escherichia coli S88 chromosome, complete genomeDNA polymerase III subunit chi2e-82303
NC_007613:4217557:423603942360394236482444Shigella boydii Sb227, complete genomeDNA polymerase III chi subunit2e-82303
NC_010658:4494103:449410344941034494546444Shigella boydii CDC 3083-94, complete genomeDNA polymerase III, chi subunit2e-82303
NC_010473:4564590:458366845836684584111444Escherichia coli str. K-12 substr. DH10B, complete genomeDNA polymerase III, chi subunit2e-81300
AC_000091:4472000:448851744885174488960444Escherichia coli W3110 DNA, complete genomeDNA polymerase III, chi subunit2e-81300
NC_000913:4462782:448186044818604482303444Escherichia coli K12, complete genomeDNA polymerase III subunit chi2e-81300
NC_020063:4127161:415030241503024150745444Enterobacteriaceae bacterium strain FGI 57, complete genomeDNA polymerase III, chi subunit5e-78288
NC_004547:442927:460923460923461372450Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeDNA polymerase III subunit chi6e-59225
NC_014500:443874:446746446746447195450Dickeya dadantii 3937 chromosome, complete genomeDNA polymerase III, subunit chi1e-58224
NC_012880:4117376:413062341306234131093471Dickeya dadantii Ech703, complete genomeDNA-directed DNA polymerase2e-58223
NC_012912:4194821:420930442093044209753450Dickeya zeae Ech1591, complete genomeDNA-directed DNA polymerase3e-58223
NC_007712:3629358:365215036521503652599450Sodalis glossinidius str. 'morsitans', complete genomeDNA polymerase III chi subunit3e-56216
NC_015061:4203767:422007242200724220557486Rahnella sp. Y9602 chromosome, complete genomeDNA-directed DNA polymerase4e-55213
NC_017047:4298207:431398743139874314472486Rahnella aquatilis HX2 chromosome, complete genomeDNA polymerase III subunit chi4e-55213
NC_020418:116500:159235159235159684450Morganella morganii subsp. morganii KT, complete genomeDNA polymerase III chi subunit9e-53205
NC_016632:1695500:170252917025291702981453Serratia symbiotica str. 'Cinara cedri' chromosome, completeDNA polymerase III subunit chi2e-51200
NC_020211:554736:557625557625558074450Serratia marcescens WW4, complete genomeDNA polymerase III, chi subunit8e-51198
NC_009092:1047500:105247710524771052938462Shewanella loihica PV-4, complete genomeDNA polymerase III chi subunit, HolC7e-26115
NC_017270:2500815:251872225187222519186465Vibrio cholerae LMA3984-4 chromosome chromosome I, completeDNA polymerase III subunit chi1e-24111
NC_020829:4246847:426501642650164265444429Pseudomonas denitrificans ATCC 13867, complete genomeDNA polymerase III subunit chi4e-1580.1
NC_011770:1226923:123912312391231239551429Pseudomonas aeruginosa LESB58, complete genomeDNA polymerase III, chi subunit6e-1579.7
NC_008463:1223012:123493412349341235362429Pseudomonas aeruginosa UCBPP-PA14, complete genomeDNA polymerase holoenzyme chi subunit5e-1579.7
NC_018080:1100047:111369611136961114124429Pseudomonas aeruginosa DK2 chromosome, complete genomeDNA polymerase III subunit chi2e-1477.8
NC_002516:4285477:429042742904274290855429Pseudomonas aeruginosa PAO1, complete genomeDNA polymerase III subunit chi2e-1477.8
NC_018012:1076839:109639310963931096824432Thiocystis violascens DSM 198 chromosome, complete genomeDNA polymerase III subunit chi2e-1270.9
NC_007484:293763:315513315513315944432Nitrosococcus oceani ATCC 19707, complete genomeDNA polymerase III chi subunit, HolC6e-1269.7
NC_002977:2254440:225727322572732257731459Methylococcus capsulatus str. Bath, complete genomeDNA polymerase III, chi subunit, putative4e-0960.1