Pre_GI: BLASTP Hits

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Query: NC_012967:3191319:3209930 Escherichia coli B str. REL606 chromosome, complete genome

Start: 3209930, End: 3210265, Length: 336

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012759:3143455:316217231621723162507336Escherichia coli BW2952 chromosome, complete genomeputative regulator PrlF6e-59225
AC_000091:3258377:327685732768573277192336Escherichia coli W3110 DNA, complete genomepredicted regulator6e-59225
NC_010473:3354052:337276933727693373104336Escherichia coli str. K-12 substr. DH10B, complete genomepredicted regulator6e-59225
CP002185:3475991:349470634947063495041336Escherichia coli W, complete genomepredicted regulator6e-59225
NC_009801:3595001:361187936118793612214336Escherichia coli E24377A, complete genomeHtrA suppressor protein SohA6e-59225
NC_011748:3608917:363196936319693632304336Escherichia coli 55989, complete genomeputative regulator PrlF6e-59225
NC_000913:3256307:327502432750243275359336Escherichia coli K12, complete genomepredicted regulator6e-59225
CU928145:3608917:363196936319693632304336Escherichia coli 55989 chromosome, complete genomeputative regulator6e-59225
NC_011415:3523364:354480635448063545141336Escherichia coli SE11 chromosome, complete genomeputative regulator PrlF6e-59225
NC_011750:3768692:378984637898463790181336Escherichia coli IAI39 chromosome, complete genomeputative regulator PrlF9e-59224
NC_011751:3710786:373194237319423732277336Escherichia coli UMN026 chromosome, complete genomeputative regulator PrlF2e-58223
NC_002695:3994970:401623740162374016572336Escherichia coli O157:H7 str. Sakai, complete genomesuppressor protein SohA2e-58223
NC_013941:3884725:390587939058793906214336Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHtrA suppressor protein2e-58223
NC_010498:3488513:350703335070333507173141Escherichia coli SMS-3-5, complete genomeHtrA suppressor protein SohA3e-1994
NC_015856:1:193861938619727342Collimonas fungivorans Ter331 chromosome, complete genometranscriptional regulator6e-1476.3
NC_008786:1553833:157259915725991572925327Verminephrobacter eiseniae EF01-2, complete genomeHtaR suppressor protein3e-1270.5
NC_009434:3611738:374485937448593745188330Pseudomonas stutzeri A1501, complete genomeputative regulator PrlF1e-1168.2
NC_000911:96325:110392110392110724333Synechocystis sp. PCC 6803, complete genomeHtaR suppressor protein1e-0858.5
NC_017039:96325:110392110392110724333Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeHtaR suppressor protein1e-0858.5
NC_017052:96325:110392110392110724333Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeHtaR suppressor protein1e-0858.5
NC_017277:96325:110392110392110724333Synechocystis sp. PCC 6803, complete genomeHtaR suppressor protein1e-0858.5
NC_012988:2507142:252228725222872522628342Methylobacterium extorquens DM4, complete genometranscriptional regulator1e-0858.2
NC_011035:829945:861328861328861639312Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein3e-0650.8
NC_008782:1308007:132591413259141326300387Acidovorax sp. JS42, complete genometranscriptional regulator, AbrB family4e-0650.1