Pre_GI: BLASTN Hits

Some Help

Query: NC_012962:4591295 Photorhabdus asymbiotica, complete genome

Start: 4591295, End: 4610100, Length: 18806

Host Lineage: Photorhabdus asymbiotica; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a North American clinical isolate from human blood. Photorhabdus asymbiota, formerly Xenorhabdus luminescens, has been isolated from human wound and blood infections often in association with spider bites. This species can also be isolated from the entomopathogenic nematode Heterorhabditis indica. Photorhabdus asymbiota is divided into two subspecies, subsp. australis which contains the Australian clinical isolates and subsp. asymbiota which contains the North American isolates. Photorhabdus is currently subdivided into three species, luminescens, temperate and asymbiotica all of which have been isolated as symbionts of heterorhabditid nematodes. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_005126:5188976*5188976521454825573Photorhabdus luminescens subsp. laumondii TTO1, complete genome08570BLASTN svgBLASTP svg
CP002516:42366804236680425575819079Escherichia coli KO11, complete genome01893BLASTN svgBLASTP svg
CP002185:4750571*4750571477251221942Escherichia coli W, complete genome01893BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,01806BLASTN svgBLASTP svg
NC_012962:16616831661683171390552223Photorhabdus asymbiotica, complete genome01554BLASTN svgBLASTP svg
NC_020211:554736*55473659042335688Serratia marcescens WW4, complete genome01039BLASTN svgBLASTP svg
NC_012917:32411963241196329451553320Pectobacterium carotovorum subsp. carotovorum PC1, complete genome0821BLASTN svgBLASTP svg
AC_000091:4501430*4501430452291521486Escherichia coli W3110 DNA, complete genome0791BLASTN svgBLASTP svg
NC_000913:44947734494773451470019928Escherichia coli K12, complete genome0791BLASTN svgBLASTP svg
NC_010473:4596500*4596500461806621567Escherichia coli str. K-12 substr. DH10B, complete genome0791BLASTN svgBLASTP svg
NC_014228:3591758*3591758361409922342Xenorhabdus nematophila ATCC 19061, complete genome6e-121442BLASTN svgBLASTP svg
NC_004547:1174650*1174650121156236913Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-40174BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008577:24021652402165244759945435Shewanella sp. ANA-3 chromosome 1, complete sequence1e-1075.8BLASTN svgBLASTP svg
NC_015737:44991444991447646526552Clostridium sp. SY8519, complete genome9e-0660BLASTN svgBLASTP svg
NC_011071:11784231178423120226523843Stenotrophomonas maltophilia R551-3, complete genome9e-0660BLASTN svgBLASTP svg