Pre_GI: BLASTP Hits

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Query: NC_012962:4591295:4598396 Photorhabdus asymbiotica, complete genome

Start: 4598396, End: 4599361, Length: 966

Host Lineage: Photorhabdus asymbiotica; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a North American clinical isolate from human blood. Photorhabdus asymbiota, formerly Xenorhabdus luminescens, has been isolated from human wound and blood infections often in association with spider bites. This species can also be isolated from the entomopathogenic nematode Heterorhabditis indica. Photorhabdus asymbiota is divided into two subspecies, subsp. australis which contains the Australian clinical isolates and subsp. asymbiota which contains the North American isolates. Photorhabdus is currently subdivided into three species, luminescens, temperate and asymbiotica all of which have been isolated as symbionts of heterorhabditid nematodes. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:5188976:519356151935615194526966Photorhabdus luminescens subsp. laumondii TTO1, complete genomeProtein fecR2e-158558
NC_004547:1174650:120816712081671209129963Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeiron(III) dicitrate sensor protein8e-124443
NC_014228:3591758:3599750359975036007931044Xenorhabdus nematophila ATCC 19061, complete genomeProtein fecR1e-121436
NC_012759:4433500:445352244535224454475954Escherichia coli BW2952 chromosome, complete genomefec operon regulator FecR2e-116419
AC_000091:4501430:452144445214444522397954Escherichia coli W3110 DNA, complete genometransmembrane signal transducer for ferric citrate transport2e-116419
NC_010473:4596500:461659546165954617548954Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport2e-116419
NC_016822:4889656:489301448930144893967954Shigella sonnei 53G, complete genomefec operon regulator FecR4e-116417
NC_016612:3843358:387155938715593872506948Klebsiella oxytoca KCTC 1686 chromosome, complete genomefec operon regulator FecR1e-105383
NC_015556:2265940:230352123035212304444924Pseudomonas fulva 12-X chromosome, complete genomeanti-FecI sigma factor, FecR1e-55216
NC_018691:1293449:131480613148061315771966Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor FecR3e-49195
NC_015572:427732:455162455162456127966Methylomonas methanica MC09 chromosome, complete genomeanti-FecI sigma factor FecR1e-47190
NC_007974:934000:952517952517953503987Ralstonia metallidurans CH34 chromosome 2, complete sequenceputative FecR2e-43176
NC_010322:768849:791778791778792734957Pseudomonas putida GB-1 chromosome, complete genomeanti-FecI sigma factor FecR2e-42173
NC_008027:2648560:265110926511092652029921Pseudomonas entomophila L48, complete genomeFecR-like transmembrane sensor2e-42172
NC_018691:318662:318662318662319606945Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor, FecR5e-42171
NC_014640:2693060:269635326963532697321969Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein3e-38159
NC_016830:3697173:371480137148013715781981Pseudomonas fluorescens F113 chromosome, complete genomeFe2+-dicitrate sensor membrane protein4e-37155
NC_008027:4889662:489228348922834893212930Pseudomonas entomophila L48, complete genomeFecR-like transmembrane sensor4e-37155
NC_005966:1780468:178461817846181785559942Acinetobacter sp. ADP1, complete genomemembrane bound regulator in multi-component regulatory system with cytoplasmic FecI (sigma factor) and FecA (outer membrane receptor)5e-30132
NC_012560:201237:216665216665217627963Azotobacter vinelandii DJ, complete genomeanti-sigma factor, FecR family2e-28126
NC_021150:201237:216665216665217627963Azotobacter vinelandii CA6, complete genomeanti-sigma factor, FecR family2e-28126
NC_007953:1088933:108798010879801088936957Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative FecR1e-27124
NC_014640:5047201:5066881506688150678941014Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein3e-27122
NC_014640:5047201:506272550627255063720996Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein5e-26118
NC_010322:768849:785508785508786506999Pseudomonas putida GB-1 chromosome, complete genomeanti-FecI sigma factor FecR7e-25114
NC_015410:1324313:132982813298281330793966Pseudomonas mendocina NK-01 chromosome, complete genomeputative transmembrane sensor3e-23109
NC_015563:4093650:4097302409730240983301029Delftia sp. Cs1-4 chromosome, complete genomeanti-FecI sigma factor FecR3e-22105
NC_018691:359695:359695359695360609915Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor, FecR3e-21102
NC_016112:1735044:175536217553621756315954Methylomicrobium alcaliphilum chromosome, complete genomeAnti-FecI sigma factor, FecR4e-21102
NC_014100:2782000:280326228032622804257996Caulobacter segnis ATCC 21756 chromosome, complete genomeanti-FecI sigma factor FecR4e-1892.4
NC_009937:5033152:503543550354355036382948Azorhizobium caulinodans ORS 571, complete genomeputative iron siderophore sensor protein6e-1788.2
NC_014664:1360524:137378513737851374765981Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeanti-FecI sigma factor, FecR1e-1687.8
NC_015594:1210736:121465212146521215626975Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeanti-FecI sigma factor FecR1e-1584
NC_008687:133728:153212153212154198987Paracoccus denitrificans PD1222 chromosome 2, complete sequenceputative FecR4e-1479
NC_002516:1474000:147546414754641476306843Pseudomonas aeruginosa PAO1, complete genomeprobable transmembrane sensor6e-1478.6
NC_010995:2123909:2130175213017521311971023Cellvibrio japonicus Ueda107, complete genomeprobable transmembrane sensor9e-1374.7
NC_015593:2841856:288455028845502885536987Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeanti-FecI sigma factor FecR3e-1273.2
NC_014540:2908912:291099429109942911962969Burkholderia sp. CCGE1003 chromosome 2, complete sequenceanti-FecI sigma factor, FecR3e-1272.8
NC_011144:2710876:272531427253142726300987Phenylobacterium zucineum HLK1, complete genometranscriptional regulator6e-1272
NC_020409:584000:5932265932265942901065Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Anti-FecI sigma factor, FecR7e-1271.6
NC_011958:1121387:114404611440461145020975Rhodobacter sphaeroides KD131 chromosome 2, complete genomeFecR protein7e-1271.6
NC_009040:43791:623866238663360975Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completeputative FecR1e-1170.9
NC_013421:1954915:197058119705811971534954Pectobacterium wasabiae WPP163, complete genomeanti-FecI sigma factor, FecR1e-1067.8
NC_010943:1379707:138250813825081383476969Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane protein1e-1067.4
NC_010510:339879:345373345373346371999Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeanti-FecI sigma factor, FecR1e-1067.4
NC_017192:1933106:193807519380751939040966Arcobacter sp. L, complete genomesigma factor regulator2e-1067
NC_010338:2136193:2139478213947821405121035Caulobacter sp. K31, complete genomeanti-FecI sigma factor, FecR3e-1066.2
NC_015976:2150676:2158706215870621597341029Sphingobium sp. SYK-6, complete genomeputative anti-sigma factor7e-1065.1
NC_007947:1429165:1440674144067414417201047Methylobacillus flagellatus KT, complete genomeputative FecR2e-0963.2
NC_009850:972692:985853985853986821969Arcobacter butzleri RM4018, complete genomesigma factor regulatory protein, FecR/PupR family3e-0962.8
NC_014375:1146328:117307511730751174031957Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeanti-FecI sigma factor, FecR6e-0961.6
NC_017187:937649:950809950809951777969Arcobacter butzleri ED-1, complete genomesigma factor regulator1e-0860.8
NC_007492:3655545:367411036741103675048939Pseudomonas fluorescens PfO-1, complete genomePutative FecR9e-0858.2
NC_018691:3525430:353716735371673538147981Alcanivorax dieselolei B5 chromosome, complete genomeSigma factor regulatory protein, FecR/PupR family3e-0756.2
NC_012560:2546000:254697025469702547803834Azotobacter vinelandii DJ, complete genomeAnti-sigma factor, FecR family5e-0755.5
NC_021150:2546000:254698225469822547815834Azotobacter vinelandii CA6, complete genomeAnti-sigma factor, FecR family5e-0755.5
NC_008686:1592073:161110316111031612077975Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative FecR2e-0653.9
NC_014934:869715:8749888749888761511164Cellulophaga algicola DSM 14237 chromosome, complete genomeanti-feci sigma factor, fecr5e-0652