Pre_GI: BLASTN Hits

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Query: NC_012947:3487392 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Start: 3487392, End: 3513461, Length: 26070

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_000913:303719*30371932647122753Escherichia coli K12, complete genome020470BLASTN svgBLASTP svg
AC_000091:30371930371932647122753Escherichia coli W3110 DNA, complete genome020470BLASTN svgBLASTP svg
NC_011748:29908029908032372424645Escherichia coli 55989, complete genome019850BLASTN svgBLASTP svg
CU928145:29908029908032372424645Escherichia coli 55989 chromosome, complete genome019850BLASTN svgBLASTP svg
NC_010473:27994827994830350723560Escherichia coli str. K-12 substr. DH10B, complete genome019170BLASTN svgBLASTP svg
NC_010498:301000*30100034338442385Escherichia coli SMS-3-5, complete genome019110BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome018500BLASTN svgBLASTP svg
NC_007946:289425*28942536040270978Escherichia coli UTI89, complete genome018460BLASTN svgBLASTP svg
NC_004431:364000*36400042492660927Escherichia coli CFT073, complete genome018450BLASTN svgBLASTP svg
NC_011751:348000*34800037070122702Escherichia coli UMN026 chromosome, complete genome016780BLASTN svgBLASTP svg
NC_009800:349592*34959238017230581Escherichia coli HS, complete genome015000BLASTN svgBLASTP svg
NC_008563:318993*31899336258343591Escherichia coli APEC O1, complete genome013980BLASTN svgBLASTP svg
NC_000913:27207127207130179729727Escherichia coli K12, complete genome07188BLASTN svgBLASTP svg
AC_000091:27332527332530179728473Escherichia coli W3110 DNA, complete genome07188BLASTN svgBLASTP svg
NC_009792:36653693665369370602240654Citrobacter koseri ATCC BAA-895, complete genome6e-103383BLASTN svgBLASTP svg
NC_021066:37694053769405379116821764Raoultella ornithinolytica B6, complete genome2e-99371BLASTN svgBLASTP svg
NC_011740:27374672737467275914021674Escherichia fergusonii ATCC 35469, complete genome9e-93349BLASTN svgBLASTP svg
NC_015566:1206500*1206500124185935360Serratia sp. AS12 chromosome, complete genome3e-71278BLASTN svgBLASTP svg
NC_015567:1206727*1206727124209935373Serratia sp. AS9 chromosome, complete genome3e-71278BLASTN svgBLASTP svg
AP010958:2134556*2134556215269018135Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-64254BLASTN svgBLASTP svg
NC_008563:20413452041345206368122337Escherichia coli APEC O1, complete genome5e-48200BLASTN svgBLASTP svg
NC_002695:28939512893951291868324733Escherichia coli O157:H7 str. Sakai, complete genome3e-43184BLASTN svgBLASTP svg
NC_013508:34361734361737314529529Edwardsiella tarda EIB202, complete genome1e-42182BLASTN svgBLASTP svg
NC_020063:22300002230000227048640487Enterobacteriaceae bacterium strain FGI 57, complete genome3e-40174BLASTN svgBLASTP svg
NC_002695:91750991750994039822890Escherichia coli O157:H7 str. Sakai, complete genome7e-35157BLASTN svgBLASTP svg
NC_002655:91965491965493956619913Escherichia coli O157:H7 EDL933, complete genome7e-35157BLASTN svgBLASTP svg
AP010958:3853082*3853082389809945018Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-34155BLASTN svgBLASTP svg
NC_013850:21823372182337224909966763Klebsiella variicola At-22 chromosome, complete genome4e-33151BLASTN svgBLASTP svg
NC_008563:15054051505405154006134657Escherichia coli APEC O1, complete genome2e-32149BLASTN svgBLASTP svg
NC_002655:30194030194032759925660Escherichia coli O157:H7 EDL933, complete genome6e-29137BLASTN svgBLASTP svg
NC_002695:30193930193932873026792Escherichia coli O157:H7 str. Sakai, complete genome6e-29137BLASTN svgBLASTP svg
NC_020063:2011019*2011019203659925581Enterobacteriaceae bacterium strain FGI 57, complete genome1e-27133BLASTN svgBLASTP svg
NC_002695:3468873*3468873351343744565Escherichia coli O157:H7 str. Sakai, complete genome4e-27131BLASTN svgBLASTP svg
NC_002655:3538656*3538656358072742072Escherichia coli O157:H7 EDL933, complete genome4e-27131BLASTN svgBLASTP svg
AP010958:22729192272919229869725779Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-26129BLASTN svgBLASTP svg
NC_004431:30126683012668303118918522Escherichia coli CFT073, complete genome2e-26129BLASTN svgBLASTP svg
NC_013421:55319355319358079227600Pectobacterium wasabiae WPP163, complete genome6e-26127BLASTN svgBLASTP svg
NC_002695:21583142158314218207123758Escherichia coli O157:H7 str. Sakai, complete genome2e-23119BLASTN svgBLASTP svg
NC_002655:19091391909139193312123983Escherichia coli O157:H7 EDL933, complete genome2e-23119BLASTN svgBLASTP svg
NC_013716:1756545*1756545177694320399Citrobacter rodentium ICC168, complete genome2e-22115BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome4e-21111BLASTN svgBLASTP svg
NC_011740:62140862140864031618909Escherichia fergusonii ATCC 35469, complete genome6e-20107BLASTN svgBLASTP svg
NC_013716:5141269*5141269517008828820Citrobacter rodentium ICC168, complete genome2e-19105BLASTN svgBLASTP svg
NC_004337:20359452035945205669020746Shigella flexneri 2a str. 301, complete genome9e-19103BLASTN svgBLASTP svg
NC_004741:20097692009769203209922331Shigella flexneri 2a str. 2457T, complete genome9e-19103BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome9e-19103BLASTN svgBLASTP svg
NC_010002:4175809*4175809419921123403Delftia acidovorans SPH-1, complete genome9e-19103BLASTN svgBLASTP svg
NC_010498:12101451210145123409923955Escherichia coli SMS-3-5, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011892:779757797512040642432Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete3e-1591.7BLASTN svgBLASTP svg
NC_010102:24954412495441251396918529Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,1e-1489.7BLASTN svgBLASTP svg
NC_011080:61042861042863159921172Salmonella enterica subsp. enterica serovar Newport str. SL254,5e-1487.7BLASTN svgBLASTP svg
NC_003198:598000*59800061851020511Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1385.7BLASTN svgBLASTP svg
NC_004631:23663352366335238728320949Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-1385.7BLASTN svgBLASTP svg
NC_020063:2531643*2531643255948527843Enterobacteriaceae bacterium strain FGI 57, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_009800:2083465*2083465210667323209Escherichia coli HS, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_006511:2251022*2251022227421723196Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-1281.8BLASTN svgBLASTP svg
NC_006905:65173265173267724625515Salmonella enterica subsp. enterica serovar Choleraesuis str3e-1281.8BLASTN svgBLASTP svg
NC_011149:58889558889560977120877Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-1281.8BLASTN svgBLASTP svg
NC_011750:43900004390000444275952760Escherichia coli IAI39 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011751:4293966*4293966431867224707Escherichia coli UMN026 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015593:2103815*2103815214825244438Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete1e-1179.8BLASTN svgBLASTP svg
NC_011083:654479*65447967531220834Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-1179.8BLASTN svgBLASTP svg
NC_003197:60604860604862559319546Salmonella typhimurium LT2, complete genome1e-1179.8BLASTN svgBLASTP svg
CU928160:2091249*2091249211444123193Escherichia coli IAI1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003197:17536631753663177609922437Salmonella typhimurium LT2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003198:13368941336894136036523472Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1075.8BLASTN svgBLASTP svg
NC_004631:16235111623511164614622636Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-1075.8BLASTN svgBLASTP svg
NC_006511:12731621273162129663123470Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-1075.8BLASTN svgBLASTP svg
NC_011080:17500001750000177244622447Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-1075.8BLASTN svgBLASTP svg
NC_011751:23270142327014235440227389Escherichia coli UMN026 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome8e-1073.8BLASTN svgBLASTP svg
CP002185:2181936*2181936220473822803Escherichia coli W, complete genome8e-1073.8BLASTN svgBLASTP svg
CP002516:1902431*1902431192618823758Escherichia coli KO11, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_000913:1625500*1625500165193926440Escherichia coli K12, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015976:2900891*2900891292514524255Sphingobium sp. SYK-6, complete genome1e-0869.9BLASTN svgBLASTP svg
AC_000091:2027648*2027648207009942452Escherichia coli W3110 DNA, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_000913:2028472*2028472205003821567Escherichia coli K12, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_000913:2042935*2042935206659923665Escherichia coli K12, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_006905:17660001766000178860222603Salmonella enterica subsp. enterica serovar Choleraesuis str5e-0867.9BLASTN svgBLASTP svg
NC_007412:14775714775717525527499Anabaena variabilis ATCC 29413 plasmid C, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_010473:2119480*2119480215635336874Escherichia coli str. K-12 substr. DH10B, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-0867.9BLASTN svgBLASTP svg
NC_013956:46278904627890465524427355Pantoea ananatis LMG 20103 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014318:3947845*3947845397099423150Amycolatopsis mediterranei U32 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015947:22314932231493225840026908Burkholderia sp. JV3 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_004578:31934903193490323511841629Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012791:4007780*4007780403067322894Variovorax paradoxus S110 chromosome 1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_020181:96959996959999375524157Enterobacter aerogenes EA1509E, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015663:44479844447984447024622263Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011757:1146608*1146608117421827611Methylobacterium chloromethanicum CM4, complete genome3e-0661.9BLASTN svgBLASTP svg