Pre_GI: BLASTN Hits

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Query: NC_012947:2898179 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Start: 2898179, End: 2919724, Length: 21546

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007613:76123476123478018918956Shigella boydii Sb227, complete genome05731BLASTN svgBLASTP svg
NC_011149:28021992802199282596423766Salmonella enterica subsp. enterica serovar Agona str. SL483,04472BLASTN svgBLASTP svg
NC_003198:44534574453457450773054274Salmonella enterica subsp. enterica serovar Typhi str. CT18,02753BLASTN svgBLASTP svg
NC_006511:26779642677964270110823145Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC02698BLASTN svgBLASTP svg
NC_003197:28702682870268289109020823Salmonella typhimurium LT2, complete genome01162BLASTN svgBLASTP svg
NC_014837:37664263766426379523728812Pantoea sp. At-9b chromosome, complete genome01138BLASTN svgBLASTP svg
NC_014306:12447211244721126333018610Erwinia billingiae Eb661, complete genome0995BLASTN svgBLASTP svg
NC_020260:31280531280533684424040Cronobacter sakazakii Sp291, complete genome0731BLASTN svgBLASTP svg
NC_010102:21785942178594220346224869Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,0688BLASTN svgBLASTP svg
NC_006905:94641894641897214125724Salmonella enterica subsp. enterica serovar Choleraesuis str0680BLASTN svgBLASTP svg
NC_003197:92000092000094439424395Salmonella typhimurium LT2, complete genome0672BLASTN svgBLASTP svg
NC_011083:96726096726098909921840Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,0664BLASTN svgBLASTP svg
NC_011080:92432692432694696322638Salmonella enterica subsp. enterica serovar Newport str. SL254,0656BLASTN svgBLASTP svg
NC_013956:35257113525711354815922449Pantoea ananatis LMG 20103 chromosome, complete genome3e-120440BLASTN svgBLASTP svg
NC_010694:61498561498564279627812Erwinia tasmaniensis, complete genome7e-87329BLASTN svgBLASTP svg
NC_014562:2871765*2871765290090029136Pantoea vagans C9-1 chromosome, complete genome1e-72281BLASTN svgBLASTP svg
NC_012962:49420004942000496422122222Photorhabdus asymbiotica, complete genome5e-57230BLASTN svgBLASTP svg
NC_003295:21117302111730213127819549Ralstonia solanacearum GMI1000, complete genome2e-38168BLASTN svgBLASTP svg
NC_015424:2726223*2726223277096744745Aeromonas veronii B565 chromosome, complete genome9e-34153BLASTN svgBLASTP svg
NC_012917:3565268*3565268359123425967Pectobacterium carotovorum subsp. carotovorum PC1, complete genome9e-31143BLASTN svgBLASTP svg
NC_014562:16982531698253172164923397Pantoea vagans C9-1 chromosome, complete genome8e-25123BLASTN svgBLASTP svg
NC_014500:89413689413693546441329Dickeya dadantii 3937 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
NC_013592:80428880428883459430307Dickeya dadantii Ech586, complete genome8e-22113BLASTN svgBLASTP svg
NC_020211:45982174598217463062032404Serratia marcescens WW4, complete genome7e-19103BLASTN svgBLASTP svg
NC_013850:33035003303500332954126042Klebsiella variicola At-22 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012917:1923059*1923059194769524637Pectobacterium carotovorum subsp. carotovorum PC1, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_020064:1611820*1611820163518523366Serratia marcescens FGI94, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015061:59624759624762407627830Rahnella sp. Y9602 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015061:27708562770856279559924744Rahnella sp. Y9602 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_015061:15989201598920163040531486Rahnella sp. Y9602 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008150:27858302785830280809922270Yersinia pestis Antiqua, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012779:2424967*2424967244959924633Edwardsiella ictaluri 93-146, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013508:2356865*2356865238859931735Edwardsiella tarda EIB202, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015663:770485*77048579596825484Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020181:51825685182568520953926972Enterobacter aerogenes EA1509E, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007963:15820891582089161676234674Chromohalobacter salexigens DSM 3043, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014306:43760124376012441784741836Erwinia billingiae Eb661, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014837:2458780*2458780248745128672Pantoea sp. At-9b chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020209:32620003262000328797525976Pseudomonas poae RE*1-1-14, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012779:21275422127542216530837767Edwardsiella ictaluri 93-146, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012724:14745414745417238824935Burkholderia glumae BGR1 chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012917:3684840*3684840370871823879Pectobacterium carotovorum subsp. carotovorum PC1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_020211:31514583151458317575024293Serratia marcescens WW4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015061:31112113111211313800526795Rahnella sp. Y9602 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014323:992978992978103436141384Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_013956:43263884326388435118724800Pantoea ananatis LMG 20103 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_004547:3866439*3866439389314026702Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-0560BLASTN svgBLASTP svg