Pre_GI: BLASTP Hits

Some Help

Query: NC_012947:3077922:3082785 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Start: 3082785, End: 3084206, Length: 1422

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008319:262894:263822263822264769948Synechococcus sp. CC9311, complete genomeblue light photoreceptor cryptochrome6e-1169.3
NC_020911:4428000:4449886444988644514211536Octadecabacter antarcticus 307, complete genomecytochrome/photolyase-like protein5e-42172
NC_016940:3632974:3632974363297436343111338Saprospira grandis str. Lewin chromosome, complete genomedeoxyribodipyrimidine photo-lyase4e-69262
NC_009718:1470972:1490049149004914913591311Fervidobacterium nodosum Rt17-B1, complete genomedeoxyribodipyrimidine photo-lyase2e-53210
NC_008347:1636660:1636660163666016381591500Maricaulis maris MCS10, complete genomeDeoxyribodipyrimidine photo-lyase1e-79297
NC_018679:2412000:2430005243000524314351431Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completedeoxyribodipyrimidine photo-lyase6e-75281
NC_017262:1913302:1925116192511619265191404Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completedeoxyribodipyrimidine photo-lyase3e-69262
NC_008576:1413778:1431359143135914327891431Magnetococcus sp. MC-1, complete genomeDeoxyribodipyrimidine photo-lyase1e-66254
NC_012588:211633:2264832264832277841302Sulfolobus islandicus M.14.25 chromosome, complete genomedeoxyribodipyrimidine photo-lyase3e-55216
NC_010468:3209326:3214192321419232156101419Escherichia coli ATCC 8739, complete genomeDeoxyribodipyrimidine photo-lyase0985
NC_012779:2755338:2773018277301827744331416Edwardsiella ictaluri 93-146, complete genomedeoxyribodipyrimidine photo-lyase3e-150532
NC_013960:243884:2613422613422627751434Nitrosococcus halophilus Nc4 chromosome, complete genomeDeoxyribodipyrimidine photo-lyase3e-69263
NC_007940:97949:1207501207501221771428Rickettsia bellii RML369-C, complete genomeDeoxyribodipyrimidine photo-lyase2e-67256
NC_015186:2839668:2839668283966828412871620Acidiphilium multivorum AIU301, complete genomedeoxyribodipyrimidine photo-lyase2e-22107
NC_016832:2201860:2226120222612022275411422Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Deoxyribodipyrimidine photo-lyase0796
NC_008782:1863853:1869256186925618707221467Acidovorax sp. JS42, complete genomeDeoxyribodipyrimidine photo-lyase7e-81301
NC_013757:900500:9014229014229027861365Geodermatophilus obscurus DSM 43160, complete genomeDeoxyribodipyrimidine photo-lyase7e-79295
NC_010003:1052997:1059259105925910606471389Petrotoga mobilis SJ95, complete genomeDeoxyribodipyrimidine photo-lyase3e-65249
NC_009428:807577:8293688293688307801413Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomedeoxyribodipyrimidine photo-lyase1e-52207
NC_017059:1727095:1727095172709517282041110Rhodospirillum photometricum DSM 122, complete genomeDeoxyribodipyrimidine photo-lyase type I9e-57221
NC_009485:5171658:5173487517348751749321446Bradyrhizobium sp. BTAi1 chromosome, complete genomedeoxyribodipyrimidine photo-lyase type I3e-75282
NC_006511:2090058:2114344211434421157651422Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCdeoxyribodipyrimidine photolyase0796
NC_006677:1052031:1073968107396810754071440Gluconobacter oxydans 621H, complete genomeDeoxyribodipyrimidine photolyase2e-73276
NC_011147:2085241:2109527210952721109481422Salmonella enterica subsp. enterica serovar Paratyphi A strdeoxyribodipyrimidine photolyase0796
NC_020209:47504:1247871247871262291443Pseudomonas poae RE*1-1-14, complete genomedeoxyribodipyrimidine photolyase9e-110397
NC_013967:2641433:2680567268056726820781512Haloferax volcanii DS2 chromosome, complete genomedeoxyribodipyrimidine photolyase3e-40166
NC_004631:2205821:2229355222935522307761422Salmonella enterica subsp. enterica serovar Typhi Ty2, completedeoxyribodipyrimidine photolyase0796
NC_007516:193498:2206182206182220511434Synechococcus sp. CC9605, complete genomeDeoxyribodipyrimidine photolyase4e-80299
NC_017095:1627686:1632270163227016336101341Fervidobacterium pennivorans DSM 9078 chromosome, complete genomedeoxyribodipyrimidine photolyase6e-65248
NC_003450:627500:6425536425536440011449Corynebacterium glutamicum ATCC 13032, complete genomedeoxyribodipyrimidine photolyase2e-56220
NC_012967:707083:7204007204007218211422Escherichia coli B str. REL606 chromosome, complete genomedeoxyribodipyrimidine photolyase0988
NC_015224:1514747:1531720153172015331651446Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,deoxyribodipyrimidine photolyase8e-170597
NC_006958:628035:6440146440146454621449Corynebacterium glutamicum ATCC 13032, complete genomeDEOXYRIBODIPYRIMIDINE PHOTOLYASE2e-56220
NC_015948:2367000:2368100236810023697041605Haloarcula hispanica ATCC 33960 chromosome chromosome I, completedeoxyribodipyrimidine photolyase1e-31138
NC_007205:1232734:1253122125312212545431422Candidatus Pelagibacter ubique HTCC1062, complete genomeDeoxyribodipyrimidine photolyase (DNA photolyase) (Photoreactivating enzyme)4e-69262
NC_008027:896000:9163439163439177971455Pseudomonas entomophila L48, complete genomedeoxyribodipyrimidine photolyase (photoreactivation), FAD-binding5e-108391
NC_016001:1893685:1914423191442319157091287Flavobacterium branchiophilum, complete genomeDeoxyribodipyrimidine photolyase PhrB18e-66251
NC_012668:1688500:1691333169133316927181386Vibrio cholerae MJ-1236 chromosome 1, complete sequencedeoxyribodipyrimidine photolyase single-strand-specific1e-24115
CP002185:794732:8102778102778116951419Escherichia coli W, complete genomedeoxyribodipyrimidine photolyase, FAD-binding protein0984
NC_017270:1755552:1790924179092417923121389Vibrio cholerae LMA3984-4 chromosome chromosome I, completeDeoxyribodipyrimidine photolyase, single-strand- specific1e-24114
NC_014752:2087998:2114050211405021153511302Neisseria lactamica ST-640, complete genomedeoxyribodopyrimidine photolyase2e-33144
NC_010475:2896000:2918298291829829197311434Synechococcus sp. PCC 7002, complete genomedeoxyribopyrimidine photolyase1e-79297
NC_013446:2237854:2258323225832322597441422Comamonas testosteroni CNB-2, complete genomeDNA photolyase, FAD-binding protein1e-31137
NC_018644:516157:536362536362537096735Alpha proteobacterium HIMB59 chromosome, complete genomeFAD-binding protein, DNA photolyase family3e-1790.1
NC_018644:137755:1403511403511417961446Alpha proteobacterium HIMB59 chromosome, complete genomeFAD-binding protein, DNA photolyase family,DNA photolyase2e-25117
NC_018643:857911:8799138799138813371425Alpha proteobacterium HIMB5 chromosome, complete genomeFAD-binding protein, DNA photolyase family,DNA photolyase4e-73275
NC_010102:2322866:2347834234783423493361503Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0800
NC_017079:5034500:5058257505825750596331377Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomehypothetical protein2e-1171.2
NC_020911:4428000:4436048443604844372651218Octadecabacter antarcticus 307, complete genomehypothetical protein4e-1066.6
NC_010125:763141:7676137676137690041392Gluconacetobacter diazotrophicus PAl 5, complete genomeputative deoxyribodipyrimidine photo-lyase2e-64246