Pre_GI: BLASTP Hits

Some Help

Query: NC_012947:3015985:3017903 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Start: 3017903, End: 3018526, Length: 624

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012759:4132527:414948741494874150110624Escherichia coli BW2952 chromosome, complete genomeAntitermination protein Q3e-108390
NC_009800:289000:307726307726308349624Escherichia coli HS, complete genomeantitermination protein Q2e-107387
NC_011740:2072173:210218721021872102810624Escherichia fergusonii ATCC 35469, complete genomeAntitermination protein Q2e-107387
NC_011147:2496808:250523525052352505858624Salmonella enterica subsp. enterica serovar Paratyphi A strantitermination3e-106383
NC_006511:2501500:250969925096992510322624Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCantitermination3e-106383
NC_002655:3538656:355508535550853555708624Escherichia coli O157:H7 EDL933, complete genomeputative antiterminator of prophage CP-933Y9e-106382
NC_002695:3468873:348776234877623488385624Escherichia coli O157:H7 str. Sakai, complete genomeputative antitermination protein9e-106382
NC_011353:3573641:359190835919083592531624Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeantitermination protein Q9e-106382
NC_013008:3525428:354674735467473547370624Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeantiterminator of prophage CP-933Y9e-106382
NC_011601:1039500:105835610583561058979624Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomelate gene regulator8e-106382
NC_013361:3112023:312051731205173121140624Escherichia coli O26:H11 str. 11368 chromosome, complete genomelate gene regulator8e-106382
NC_013364:2898964:291048229104822911105624Escherichia coli O111:H- str. 11128, complete genomeputative late gene regulator8e-106382
NC_013361:3287671:328767132876713288246576Escherichia coli O26:H11 str. 11368 chromosome, complete genomelate gene regulator Q3e-97353
NC_016860:364981:385839385839386612774Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-38159
NC_013282:1200993:122325312232531224017765Cronobacter turicensis, complete genomeAntitermination protein Q homolog from lambdoid prophage Qin2e-34145
NC_014121:3627588:366048736604873661251765Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completegp737e-31133
NC_010067:2529750:258129825812982582062765Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-29129
NC_013892:671000:692742692742693521780Xenorhabdus bovienii SS-2004 chromosome, complete genomeFels-1 prophage chaperone1e-27123
NC_013892:3803278:382801638280163828795780Xenorhabdus bovienii SS-2004 chromosome, complete genomeFels-1 prophage chaperone1e-25116
NC_009778:959982:984140984140984898759Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-24110
NC_011083:374000:392518392518392679162Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,antitermination protein Q6e-24110
NC_015663:4522109:452994845299484530769822Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative late gene regulator7e-24110
NC_016816:1970189:199006519900651990871807Pantoea ananatis LMG 5342, complete genomeprophage antitermination protein4e-23107
NC_011094:638552:661576661576662379804Salmonella enterica subsp. enterica serovar Schwarzengrund strgp232e-21102
NC_013941:5317424:532221353222135322965753Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeantitermination protein Q7e-21100
NC_011750:5045927:506752550675255068277753Escherichia coli IAI39 chromosome, complete genomeputative antitermination protein Q; Qin prophage9e-21100
NC_013364:1596278:161408016140801614901822Escherichia coli O111:H- str. 11128, complete genomeputative late gene regulator2e-2099
NC_011751:1859606:187240518724051873157753Escherichia coli UMN026 chromosome, complete genomeputative antitermination protein Q; Qin prophage4e-2097.8
NC_009801:1756610:176328217632821764034753Escherichia coli E24377A, complete genomeantitermination protein4e-2097.8
NC_016845:2274500:229247622924762293258783Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative antitermination protein5e-2097.4
NC_011742:4962008:496722649672264967978753Escherichia coli S88 chromosome, complete genomeantitermination protein Q; Qin prophage8e-2097.1
NC_011740:4520373:452469345246934525445753Escherichia fergusonii ATCC 35469, complete genomeputative antitermination protein Q; Qin prophage8e-2097.1
NC_004431:3040953:305327730532773054059783Escherichia coli CFT073, complete genomeAntitermination protein Q homolog from lambdoid prophage Qin9e-2096.7
NC_008563:5011997:501717450171745017968795Escherichia coli APEC O1, complete genomelambdoid prophage Qin antitermination protein Q-like protein9e-2096.7
NC_010468:2265423:227956322795632280315753Escherichia coli ATCC 8739, complete genomeantitermination protein2e-1995.5
CP002516:2305659:232262023226202323372753Escherichia coli KO11, complete genomeantitermination protein2e-1995.5
AC_000091:1627049:164420316442031644955753Escherichia coli W3110 DNA, complete genomepredicted antitermination protein Q2e-1995.5
NC_010473:1712984:173013817301381730890753Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted antitermination protein Q2e-1995.5
CU928160:1668842:168051216805121681264753Escherichia coli IAI1 chromosome, complete genomeputative antitermination protein Q; Qin prophage2e-1995.5
NC_000913:1625500:164051316405131641265753Escherichia coli K12, complete genomeQin prophage; predicted antitermination protein Q2e-1995.5
CP002185:1770815:178248417824841783236753Escherichia coli W, complete genomeQin prophage; antitermination protein Q2e-1995.5
NC_011741:1668842:168051216805121681264753Escherichia coli IAI1 chromosome, complete genomeputative antitermination protein Q; Qin prophage2e-1995.5
NC_012759:1517500:153257215325721533324753Escherichia coli BW2952 chromosome, complete genomeQin prophage; putative antitermination protein Q2e-1995.5
NC_016902:2305659:232262023226202323372753Escherichia coli KO11FL chromosome, complete genomeantitermination protein2e-1995.5
NC_013850:2182337:220660922066092207424816Klebsiella variicola At-22 chromosome, complete genomeantitermination protein2e-1995.5
NC_016612:3314846:333289133328913333712822Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative late gene regulator4e-1994.7
CU928145:1773642:178662017866201787441822Escherichia coli 55989 chromosome, complete genomeputative antitermination protein Q of prophage3e-1994.7
NC_011748:1773642:178662017866201787441822Escherichia coli 55989, complete genomeputative antitermination protein Q of prophage3e-1994.7
NC_007384:1320287:133733513373351338189855Shigella sonnei Ss046, complete genomeantitermination protein Q3e-1994.7
NC_016822:1304398:132095313209531321807855Shigella sonnei 53G, complete genomeantitermination protein Q3e-1994.7
NC_016514:2476359:249825924982592499092834Enterobacter cloacae EcWSU1 chromosome, complete genomeantitermination protein Q-like protein from lambdoid prophage Qin2e-1892
NC_012731:2083650:210751121075112108341831Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative prophage antitermination protein4e-1891.3
NC_013282:1804909:182240218224021823232831Cronobacter turicensis, complete genomehypothetical protein4e-1787.8
NC_020181:5217000:523190452319045232584681Enterobacter aerogenes EA1509E, complete genomePhage antitermination protein Q1e-1583.2
NC_009648:1541699:156249615624961563251756Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative antitermination protein7e-1373.9
NC_011283:2836000:290023329002332901030798Klebsiella pneumoniae 342 chromosome, complete genomeantitermination protein9e-1373.6
NC_013361:2138716:215156321515632152213651Escherichia coli O26:H11 str. 11368 chromosome, complete genomelate gene regulator Q3e-1272
NC_011750:1565000:157036315703631570647285Escherichia coli IAI39 chromosome, complete genome1e-0859.7
NC_011750:1565000:156781215678121568465654Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-0859.3