Pre_GI: BLASTP Hits

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Query: NC_012947:3015985:3016443 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Start: 3016443, End: 3016919, Length: 477

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:303987:325599325599326075477Shigella flexneri 2002017 chromosome, complete genomeR protein4e-89326
NC_009800:289000:309479309479309955477Escherichia coli HS, complete genomephage lysozyme1e-88324
NC_006905:368942:391670391670392146477Salmonella enterica subsp. enterica serovar Choleraesuis strlysin6e-88322
NC_012125:1330066:135294813529481353421474Salmonella enterica subsp. enterica serovar Paratyphi C strainlysin1e-87321
NC_003198:1908238:191258519125851913061477Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative endolysin2e-80297
NC_013941:3182576:318534331853433185819477Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLysozyme6e-80295
NC_020063:2565605:257210025721002572576477Enterobacteriaceae bacterium strain FGI 57, complete genomemuramidase (phage lambda lysozyme)1e-77288
NC_011283:2836000:289756728975672898046480Klebsiella pneumoniae 342 chromosome, complete genomephage lysozyme1e-69261
NC_009648:3803622:381947238194723819969498Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage endolysin, control of lysis7e-38155
NC_012912:1701231:174462217446221745113492Dickeya zeae Ech1591, complete genomeLysozyme3e-37154
NC_014500:3097362:310176631017663102254489Dickeya dadantii 3937 chromosome, complete genomeLysozyme6e-37152
NC_013592:1668092:168477516847751685266492Dickeya dadantii Ech586, complete genomeLysozyme2e-36151
NC_017986:4931104:494128749412874941826540Pseudomonas putida ND6 chromosome, complete genomeendolysin9e-36149
NC_012880:2480000:249635024963502496841492Dickeya dadantii Ech703, complete genomeLysozyme5e-35146
NC_008390:2018201:203513820351382035590453Burkholderia cepacia AMMD chromosome 1, complete sequenceglycoside hydrolase, family 241e-33141
NC_002947:4362271:437817143781714378710540Pseudomonas putida KT2440, complete genomeendolysin3e-33140
NC_015733:1398083:140619214061921406692501Pseudomonas putida S16 chromosome, complete genomeendolysin4e-31133
NC_008314:1465643:146609414660941466729636Ralstonia eutropha H16 chromosome 2, complete sequenceMuramidase (phage lysozyme)3e-27120
NC_014500:2019113:2037269203726920389631695Dickeya dadantii 3937 chromosome, complete genomeLysozyme3e-2097.4
NC_013592:2703327:2710622271062227123161695Dickeya dadantii Ech586, complete genomeglycoside hydrolase family 247e-2096.3
NC_015137:2582467:258418625841862584836651Burkholderia sp. CCGE1001 chromosome 2, complete sequenceglycoside hydrolase family 242e-1994.7
NC_009481:764382:765098765098765721624Synechococcus sp. WH 7803 chromosome, complete genomemuramidase2e-1684.7
NC_007513:987969:101201210120121012686675Synechococcus sp. CC9902, complete genomepossible muramidase, COG46782e-1374.7
NC_011000:2732330:273984227398422740369528Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative lysozyme5e-1373.6
NC_005071:704882:720843720843721619777Prochlorococcus marinus str. MIT 9313, complete genomepossible endolysin6e-1373.2
NC_008820:1356858:136004013600401360840801Prochlorococcus marinus str. MIT 9303, complete genomepossible endolysin7e-1372.8
NC_008319:1306482:130971713097171310460744Synechococcus sp. CC9311, complete genomepossible endolysin5e-1270.1
NC_014733:1223359:124555012455501246419870Methylovorus sp. MP688 chromosome, complete genomepaar repeat-containing protein2e-0961.2
NC_011035:829945:865739865739865996258Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeAtlA protein3e-0650.8
NC_014307:1271121:127471412747141274968255Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein9e-0649.3