Pre_GI: BLASTP Hits

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Query: NC_012947:2228235:2228235 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Start: 2228235, End: 2229257, Length: 1023

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012967:1546000:1571596157159615726181023Escherichia coli B str. REL606 chromosome, complete genomeAI2 transporter0651
NC_008800:575141:5932875932875943211035Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative periplasmic solute-binding protein1e-155549
NC_015224:610807:6277426277426287761035Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative periplasmic solute-binding protein1e-154545
NC_014121:4577324:4596634459663445976351002Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeAI-2 transport system substrate-binding protein7e-147520
NC_015578:3266855:3270572327057232716511080Treponema primitia ZAS-2 chromosome, complete genomeputative lipoprotein5e-49195
NC_013205:747502:7585227585227595801059Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,ABC transporter, solute-binding, sugar transport2e-48193
NC_011297:290737:3016963016963027001005Dictyoglomus thermophilum H-6-12, complete genomerhamnose ABC transporter rhamnose-binding protein3e-36152
NC_011661:409943:4184244184244194281005Dictyoglomus turgidum DSM 6724, complete genomerhamnose ABC transporter, periplasmic rhamnose-binding protein1e-35150
NC_015957:3342169:3357865335786533589441080Streptomyces violaceusniger Tu 4113 chromosome, complete genomerhamnose ABC transporter periplasmic rhamnose-binding protein2e-35150
NC_014210:2747787:2749354274935427504211068Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,rhamnose ABC transporter, periplasmic rhamnose-binding protein1e-30134
NC_015152:2622000:262698526269852627974990Spirochaeta sp. Buddy chromosome, complete genomeABC transporter substrate-binding protein2e-1790.1
NC_009328:1903291:192429219242921925248957Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeD-ribose-binding periplasmic protein2e-1376.6
NC_017218:2119964:212769721276972128647951Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeperiplasmic binding protein and sugar binding domain of the LacI family protein5e-1375.5
NC_014644:1532500:1541115154111515421521038Gardnerella vaginalis ATCC 14019 chromosome, complete genomeABC transporter binding protein1e-1274.7
NC_008699:3516608:3528281352828135293271047Nocardioides sp. JS614, complete genomeABC sugar transporter, periplasmic ligand binding protein1e-1067.4
NC_016590:1380092:139483113948311395823993Burkholderia sp. YI23 chromosome 3, complete sequenceputative substrate binding component of ABC transporter3e-1066.2
NC_014206:3391352:3394558339455833955711014Geobacillus sp. C56-T3 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator5e-1065.9
NC_011297:290737:300524300524301462939Dictyoglomus thermophilum H-6-12, complete genomeABC sugar transporter periplasmic ligand binding protein1e-0964.3
NC_011899:1021672:103036310303631031325963Halothermothrix orenii H 168, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-0964.3
NC_013642:942767:9505839505839516351053Thermotoga naphthophila RKU-10, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-0963.5
NC_016593:2015321:202665620266562027618963Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completesugar ABC transporter (Sugar-binding protein)4e-0962.4
NC_011661:409943:417255417255418193939Dictyoglomus turgidum DSM 6724, complete genomeperiplasmic binding protein/LacI transcriptional regulator5e-0962.4
NC_014206:1694330:1700332170033217013391008Geobacillus sp. C56-T3 chromosome, complete genomesugar ABC transporter sugar-binding protein5e-0962.4
NC_016641:2894899:2908219290821929092261008Paenibacillus terrae HPL-003 chromosome, complete genomesugar ABC transporter periplasmic protein2e-0860.1
NC_018681:7191008:719381671938167194811996Nocardia brasiliensis ATCC 700358 chromosome, complete genomesugar ABC transporter periplasmic protein2e-0860.1
NC_014960:1910202:1927068192706819280781011Anaerolinea thermophila UNI-1, complete genomeABC transporter substrate binding protein precursor2e-0860.1
NC_009328:1903291:1912506191250619135071002Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesugar ABC transporter substrate-binding protein4e-0859.3
NC_014377:1871333:187802218780221879011990Thermosediminibacter oceani DSM 16646 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator5e-0858.9
NC_015675:1721543:174843017484301749407978Mesorhizobium opportunistum WSM2075 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator9e-0858.2
NC_019973:1731626:175841217584121759389978Mesorhizobium australicum WSM2073, complete genomeABC-type sugar transport system, periplasmic component4e-0755.8
NC_009828:1474970:1480939148093914819521014Thermotoga lettingae TMO, complete genomeperiplasmic binding protein/LacI transcriptional regulator6e-0755.5
NC_008577:1015419:1022525102252510235351011Shewanella sp. ANA-3 chromosome 1, complete sequencesugar-binding protein, putative1e-0654.3
NC_016771:2933886:294596029459602946955996Bacillus cereus NC7401, complete genomeperiplasmic sugar-binding proteins2e-0653.5
NC_011658:2978000:299008329900832991078996Bacillus cereus AH187 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-0653.5
NC_008541:2037793:204289820428982043854957Arthrobacter sp. FB24 chromosome 1, complete sequenceperiplasmic binding protein/LacI transcriptional regulator4e-0652.4
NC_009654:4716417:4748304474830447493351032Marinomonas sp. MWYL1, complete genomeperiplasmic binding protein/LacI transcriptional regulator9e-0651.2