Pre_GI: BLASTP Hits

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Query: NC_012917:833721:861267 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 861267, End: 862790, Length: 1524

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013093:5922777:5922777592277759251612385Actinosynnema mirum DSM 43827, complete genomePectinesterase4e-1376.6
NC_013093:5922777:5926380592638059279031524Actinosynnema mirum DSM 43827, complete genomeAlpha-N-arabinofuranosidase4e-1583.6
NC_017186:8588000:8603333860333386054172085Amycolatopsis mediterranei S699 chromosome, complete genomeglucose/sorbosone dehydrogenase3e-0653.9
NC_014318:8590078:8603277860327786053612085Amycolatopsis mediterranei U32 chromosome, complete genomeglucose/sorbosone dehydrogenase3e-0653.9
NC_014551:1279229:1306421130642113075391119Bacillus amyloliquefaciens DSM 7, complete genomesecreted arabinogalactan oligomer endo-hydrolase2e-137489
NC_009725:1159637:1180093118009311812051113Bacillus amyloliquefaciens FZB42, complete genomeGanA4e-137488
NC_020272:2748733:2748733274873327498451113Bacillus amyloliquefaciens IT-45, complete genomearabinogalactan endo-1,4-beta-galactosidase1e-137490
NC_017190:1196356:1223560122356012246781119Bacillus amyloliquefaciens LL3 chromosome, complete genomesecreted arabinogalactan oligomer endo-hydrolase2e-137489
NC_019842:1203291:1224811122481112259231113Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,GanA2e-137489
NC_020410:1123121:1147771114777111488831113Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeGanA1e-135483
NC_017188:2172706:2174807217480721759251119Bacillus amyloliquefaciens TA208 chromosome, complete genomesecreted arabinogalactan oligomer endo-hydrolase2e-137489
NC_017191:2174741:2176842217684221779601119Bacillus amyloliquefaciens XH7 chromosome, complete genomearabinogalactan endo-1,4-beta-galactosidase2e-137489
NC_009848:3582384:3582384358238435835921209Bacillus pumilus SAFR-032, complete genomearabinogalactan endo-1,4-beta-galactosidase5e-52205
NC_014933:3637172:3642122364212236433091188Bacteroides helcogenes P 36-108 chromosome, complete genomeArabinogalactan endo-1,4-beta-galactosidase2e-55217
NC_004663:6104875:6118695611869561197561062Bacteroides thetaiotaomicron VPI-5482, complete genomearabinogalactan endo-1,4-beta-galactosidase4e-58226
NC_014638:56500:6288162881654842604Bifidobacterium bifidum PRL2010 chromosome, complete genome1,4-beta-N-acetylmuramidase2e-1274.7
NC_014616:54500:5952559525621282604Bifidobacterium bifidum S17 chromosome, complete genome1,4-beta-N-acetylmuramidase4e-1273.6
NC_013172:466300:4718044718044734771674Brachybacterium faecium DSM 4810, complete genomearabinogalactan endo-1,4-beta-galactosidase1e-45184
NC_013172:466300:4734744734744746731200Brachybacterium faecium DSM 4810, complete genomearabinogalactan endo-1,4-beta-galactosidase8e-36152
NC_008061:2106848:2136731213673121378941164Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceArabinogalactan endo-1,4-beta-galactosidase8e-60231
NC_008543:127675:1318771318771330401164Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceArabinogalactan endo-1,4-beta-galactosidase8e-60231
NC_015514:3508022:3533569353356935350711503Cellulomonas fimi ATCC 484 chromosome, complete genomealpha-N-arabinofuranosidase9e-1582
NC_010995:948041:9641469641469655101365Cellvibrio japonicus Ueda107, complete genomebeta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43C2e-1377.8
NC_010995:948041:9697379697379716111875Cellvibrio japonicus Ueda107, complete genomealpha-L-arabinfuranosidase, putative, abf43M1e-0758.5
NC_013132:7204082:7220238722023872238013564Chitinophaga pinensis DSM 2588, complete genomeRicin B lectin7e-1169.3
NC_011898:3772899:3779339377933937855606222Clostridium cellulolyticum H10, complete genomeprotein of unknown function DUF2914e-1789.7
NC_014393:1221000:1238262123826212403942133Clostridium cellulovorans 743B chromosome, complete genomePectate lyase/Amb allergen9e-0652
NC_014393:1782811:1790663179066317948084146Clostridium cellulovorans 743B chromosome, complete genomeLPXTG-motif cell wall anchor domain-containing protein9e-85314
NC_016627:3205333:3209626320962632113501725Clostridium clariflavum DSM 19732 chromosome, complete genomebeta-xylosidase1e-25118
NC_015275:882022:8862768862768900733798Clostridium lentocellum DSM 5427 chromosome, complete genomeArabinogalactan endo-1,4-beta-galactosidase3e-35150
NC_016791:1266404:1272471127247112778585388Clostridium sp. BNL1100 chromosome, complete genomehypothetical protein4e-1790.1
NC_015856:2146713:2174752217475221762661515Collimonas fungivorans Ter331 chromosome, complete genomealpha-L-arabinofuranosidase2e-0758.2
NC_015738:978794:9951409951409990303891Eggerthella sp. YY7918, complete genomesubtilisin-like serine protease4e-0653.1
NC_015738:978794:9864649864649898923429Eggerthella sp. YY7918, complete genomehypothetical protein1e-0965.1
NC_004547:913553:9430259430259445481524Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative exported plant proteoglycan hydrolase0986
NC_013410:3017983:3038408303840830399161509Fibrobacter succinogenes subsp. succinogenes S85 chromosome,arabinogalactan endo-1,4-beta-galactosidase4e-40166
NC_016593:956839:9715029715029739462445Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein6e-36152
NC_013744:300000:3369123369123411534242Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeRicin B lectin7e-21102
NC_013745:104385:1055371055371070691533Haloterrigena turkmenica DSM 5511 plasmid pHTUR02, completeglycoside hydrolase family 431e-1068.2
NC_013174:2321000:2323584232358423246781095Jonesia denitrificans DSM 20603, complete genomeArabinogalactan endo-1,4-beta-galactosidase2e-55216
NC_016935:4117485:4153215415321541548821668Paenibacillus mucilaginosus 3016 chromosome, complete genomecellulase4e-1480.1
NC_015690:4361000:4387115438711543887821668Paenibacillus mucilaginosus KNP414 chromosome, complete genomeCellulase5e-1479.7
NC_014483:3235968:3257348325734832584001053Paenibacillus polymyxa E681 chromosome, complete genomeArabinogalactan endo-1,4-beta-galactosidase8e-61234
NC_014622:3525017:3547732354773235487841053Paenibacillus polymyxa SC2 chromosome, complete genomearabinogalactan endo-1,4-beta-galactosidase1e-62241
NC_013421:1038500:1046997104699710485201524Pectobacterium wasabiae WPP163, complete genomeArabinogalactan endo-1,4-beta-galactosidase01005
NC_015977:2309873:2323270232327023244061137Roseburia hominis A2-183 chromosome, complete genomearabinogalactan endo-1,4-beta-galactosidase2e-1481.3
NC_015977:2309873:232438723243872324929543Roseburia hominis A2-183 chromosome, complete genomeArabinogalactan endo-1,4-beta-galactosidase9e-1995.5
NC_015977:2309873:2328049232804923291221074Roseburia hominis A2-183 chromosome, complete genomearabinogalactan endo-1,4-beta-galactosidase4e-46186
NC_009142:5519208:554459255445925545044453Saccharopolyspora erythraea NRRL 2338, complete genomealpha-glucosidase6e-1376.3
NC_014623:4140565:4143900414390041453691470Stigmatella aurantiaca DW4/3-1 chromosome, complete genomericin b lectin domain-containing protein3e-1067.4
NC_014623:7093203:7099539709953971016382100Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeoxidoreductase5e-0653.1
NC_014623:2418762:242522624252262425765540Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein1e-0964.7
NC_014623:7133149:7152104715210471532731170Stigmatella aurantiaca DW4/3-1 chromosome, complete genomebeta-mannanase1e-0758.2
NC_014623:1829000:1839391183939118416282238Stigmatella aurantiaca DW4/3-1 chromosome, complete genomealpha-glucosidase-like protein8e-1995.5
NC_016582:11820671:1185629811856298118578061509Streptomyces bingchenggensis BCW-1 chromosome, complete genomecellulose-binding family II protein8e-21102
NC_016582:11878078:1188415611884156118863572202Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-1068.2
NC_003888:8594500:860318186031818603747567Streptomyces coelicolor A3(2), complete genomesecreted protein6e-0652.8
NC_013929:1119384:1144373114437311467332361Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein6e-0962.8
NC_013929:66500:7330273302749421641Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-1067.8
NC_013929:7278414:7308950730895073104551506Streptomyces scabiei 87.22 chromosome, complete genomeglycosyl hydrolase1e-0965.5
NC_013929:9450747:9461634946163494630641431Streptomyces scabiei 87.22 chromosome, complete genomearabinase2e-0861.2
NC_019897:1224798:1224798122479812260541257Thermobacillus composti KWC4 chromosome, complete genomebeta-glucanase/beta-glucan synthetase1e-1688.2
NC_014221:2188250:2197714219771421988381125Truepera radiovictrix DSM 17093 chromosome, complete genomeArabinogalactan endo-1,4-beta-galactosidase2e-54214
NC_003919:1491001:1508458150845815096691212Xanthomonas axonopodis pv. citri str. 306, complete genomearabinogalactan endo-1,4-beta-galactosidase6e-28125
NC_016010:637535:6421136421136431141002Xanthomonas axonopodis pv. citrumelo F1 chromosome, completearabinogalactan endo-1,4-beta-galactosidase3e-63243
NC_010688:673454:6780016780016790021002Xanthomonas campestris pv. campestris, complete genomeexported arabinogalactan endo-1,4-beta-galactosidase2e-65250
NC_017271:4193000:4213292421329242142931002Xanthomonas campestris pv. raphani 756C chromosome, completearabinogalactan endo-1,4-beta-galactosidase1e-64247
NC_017271:1517820:1539758153975815409661209Xanthomonas campestris pv. raphani 756C chromosome, completearabinogalactan endo-1,4-beta-galactosidase8e-30132
NC_007508:1517393:1534486153448615356971212Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative galactosidase precursor1e-29131
NC_007508:689046:6890466890466905811536Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomearabinogalactan endo-1,4-beta-galactosidase precursor9e-57221
NC_017168:144000:1657971657971669991203Yersinia pestis A1122 chromosome, complete genomeputative galactosidase5e-48192
NC_009381:720000:7417767417767429781203Yersinia pestis Pestoides F chromosome, complete genomegalactosidase5e-48192