Pre_GI: BLASTP Hits

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Query: NC_012917:569856:572709 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 572709, End: 575033, Length: 2325

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013282:3719500:3731436373143637343422907Cronobacter turicensis, complete genomehypothetical protein9e-75282
NC_016642:3554000:3554062355406235606706609Pseudovibrio sp. FO-BEG1 chromosome, complete genomeOuter membrane autotransporter barrel domain-containing protein7e-21103
NC_002927:960369:9840319840319882484218Bordetella bronchiseptica RB50, complete genomeautotransporter1e-20102
NC_015388:269301:2743472743472837249378Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeouter membrane autotransporter barrel domain protein2e-1998.2
NC_014217:2760898:2795981279598128024816501Starkeya novella DSM 506 chromosome, complete genomeouter membrane autotransporter barrel domain protein6e-1996.7
NC_014923:3968000:3988816398881639926463831Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeouter membrane autotransporter barrel domain protein3e-1790.9
NC_007005:4411388:4443425444342544464303006Pseudomonas syringae pv. syringae B728a, complete genomeOuter membrane autotransporter barrel1e-1689.4
NC_004578:5916711:5917963591796359209232961Pseudomonas syringae pv. tomato str. DC3000, complete genomeautotransporter, putative8e-1686.3
NC_016514:1142607:1168896116889611719583063Enterobacter cloacae EcWSU1 chromosome, complete genomeextracellular serine protease2e-1584.7
NC_009832:5214850:5237497523749752405113015Serratia proteamaculans 568, complete genomeouter membrane autotransporter barrel domain3e-1584.3
NC_014217:4550544:4552335455233545552322898Starkeya novella DSM 506 chromosome, complete genomeouter membrane autotransporter barrel domain protein6e-1583.2
NC_009832:5214850:5234327523432752374283102Serratia proteamaculans 568, complete genomeouter membrane autotransporter barrel domain9e-1582.8
NC_016078:913713:9137139137139172103498Pelagibacterium halotolerans B2 chromosome, complete genomeautotransporter1e-1379
NC_015566:5197624:5216285521628552193743090Serratia sp. AS12 chromosome, complete genomeouter membrane autotransporter barrel domain-containing protein3e-1378.2
NC_007005:4411388:4440217444021744433333117Pseudomonas syringae pv. syringae B728a, complete genomeOuter membrane autotransporter barrel2e-1275.5
NC_020209:3797830:3801463380146338045613099Pseudomonas poae RE*1-1-14, complete genomeautotransporter1e-1275.5
NC_018645:1798874:1805861180586118145548694Desulfobacula toluolica Tol2, complete genomeouter membrane autotransporter barrel protein1e-1275.5
NC_006138:225832:2612312612312642242994Desulfotalea psychrophila LSv54, complete genomesimilar to serine protease2e-1068.6
NC_017062:547317:5568145568145638096996Rickettsia typhi str. B9991CWPP chromosome, complete genomecell surface antigen Sca32e-1068.6
NC_017192:1137724:1143168114316811499356768Arcobacter sp. L, complete genomeputative cell surface protein2e-0965.1
NC_006138:225832:2646812646812677223042Desulfotalea psychrophila LSv54, complete genomesimilar to serine protease4e-0963.9
NC_008687:229941:2408322408322428652034Paracoccus denitrificans PD1222 chromosome 2, complete sequenceouter membrane autotransporter barrel domain2e-0862
NC_008687:256692:2635302635302670243495Paracoccus denitrificans PD1222 chromosome 2, complete sequenceouter membrane autotransporter barrel domain2e-0861.6
NC_010170:4196197:4196197419619742030276831Bordetella petrii, complete genomeautotransporter5e-0860.5
NC_013960:841181:8411818411818426021422Nitrosococcus halophilus Nc4 chromosome, complete genomeouter membrane autotransporter barrel domain protein1e-0759.3
NC_003902:3666544:3728778372877837305621785Xanthomonas campestris pv. campestris str. ATCC 33913, completelipase/esterase5e-0757
NC_007086:1224867:1228958122895812307421785Xanthomonas campestris pv. campestris str. 8004, complete genomelipase/esterase5e-0757
NC_010688:1192410:1194541119454111963581818Xanthomonas campestris pv. campestris, complete genomeautotransporter carboxylic ester hydrolase5e-0757
NC_013517:3948500:3965206396520639679472742Sebaldella termitidis ATCC 33386, complete genomeouter membrane autotransporter barrel domain protein1e-0655.8
NC_012796:3267569:3305895330589533121406246Desulfovibrio magneticus RS-1, complete genomehypothetical protein3e-0654.7
NC_002678:763808:76380876380877478710980Mesorhizobium loti MAFF303099, complete genomehypothetical protein3e-0654.3
NC_015458:3390674:3407114340711434095162403Pusillimonas sp. T7-7 chromosome, complete genomeautotransporter4e-0654.3
NC_017051:878514:8785148785148834454932Rickettsia prowazekii str. Dachau chromosome, complete genomecell surface antigen (sca5)6e-0653.5