Pre_GI: BLASTP Hits

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Query: NC_012917:3684840:3705003 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3705003, End: 3706253, Length: 1251

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:3866439:3884432388443238856821251Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein0825
NC_005810:754340:7695077695077707541248Yersinia pestis biovar Microtus str. 91001, complete genomefermentation/respiration switch protein0640
NC_006155:1074298:1089409108940910906561248Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein0640
NC_010634:1056441:1071552107155210727991248Yersinia pseudotuberculosis PB1/+, complete genomeprotein of unknown function DUF1100 hydrolase family protein0640
NC_008149:1002453:1016770101677010180171248Yersinia pestis Nepal516, complete genomehypothetical protein0640
NC_010465:3597000:3600288360028836015351248Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF1100 hydrolase family protein0640
NC_010159:3502350:3506446350644635076931248Yersinia pestis Angola, complete genomeesterase YafA0640
NC_003143:3583468:3587564358756435888111248Yersinia pestis CO92, complete genomehypothetical protein0640
NC_008150:3015000:3019242301924230204891248Yersinia pestis Antiqua, complete genomehypothetical protein0640
NC_009381:3228500:3231828323182832330751248Yersinia pestis Pestoides F chromosome, complete genomefermentation/respiration switch protein0640
NC_004088:1075454:1089753108975310910181266Yersinia pestis KIM, complete genomehypothetical protein0640
NC_017265:3375463:3379194337919433804411248Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,fermentation/respiration switch protein0640
NC_017168:2158839:2173156217315621744031248Yersinia pestis A1122 chromosome, complete genomefermentation/respiration switch protein0640
NC_017160:3560153:3564249356424935654961248Yersinia pestis D182038 chromosome, complete genomehypothetical protein0640
NC_017154:3576256:3580352358035235815991248Yersinia pestis D106004 chromosome, complete genomehypothetical protein0640
NC_014029:3633955:3638051363805136392981248Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0640
NC_009708:3542336:3546432354643235476791248Yersinia pseudotuberculosis IP 31758 chromosome, complete genomefermentation/respiration switch protein0640
NC_020211:996497:99905999905910003061248Serratia marcescens WW4, complete genomefermentation-respiration switch protein1e-173609
NC_013716:357928:3579283579283591721245Citrobacter rodentium ICC168, complete genomeesterase7e-170597
NC_014618:3700640:3716833371683337180771245Enterobacter cloacae SCF1 chromosome, complete genomefermentation/respiration switch protein7e-170597
NC_016514:891772:8940548940548952981245Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YafA3e-169594
NC_020063:3690308:3746198374619837474421245Enterobacteriaceae bacterium strain FGI 57, complete genomedienelactone hydrolase-like enzyme5e-169594
NC_014121:1101093:1101093110109311023371245Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completefermentation/respiration switch protein6e-168590
NC_020260:3004500:3020719302071930219661248Cronobacter sakazakii Sp291, complete genomefermentation/respiration switch protein6e-167587
NC_015761:299386:2999332999333011771245Salmonella bongori NCTC 12419, complete genomehypothetical protein6e-166583
NC_013361:313540:3158083158083170521245Escherichia coli O26:H11 str. 11368 chromosome, complete genomefermentation/respiration switch protein1e-165583
NC_013282:923500:9242269242269255091284Cronobacter turicensis, complete genomeUPF0255 protein CKO_029572e-165582
NC_007384:307013:3092813092813105251245Shigella sonnei Ss046, complete genomehypothetical protein2e-165582
NC_017328:303987:3039873039873052311245Shigella flexneri 2002017 chromosome, complete genomeesterase frsA1e-165582
NC_010498:301000:3010713010713023151245Escherichia coli SMS-3-5, complete genomefermentation-respiration switch protein6e-165580
NC_008563:287136:2894042894042906481245Escherichia coli APEC O1, complete genomefermentation/respiration switch protein9e-165580
NC_007946:289425:2894252894252906691245Escherichia coli UTI89, complete genomehypothetical protein YafA9e-165580
NC_011745:291422:2914222914222926661245Escherichia coli ED1a chromosome, complete genomefermentation/respiration switch protein1e-164579
NC_004431:364000:3646553646553658991245Escherichia coli CFT073, complete genomehypothetical protein2e-164578
NC_013508:876431:8789288789288801931266Edwardsiella tarda EIB202, complete genomefermentation/respiration switch protein1e-161569
NC_002944:4163490:4194956419495641960621107Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein4e-0859.7