Pre_GI: BLASTP Hits

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Query: NC_012917:3684840:3697827 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3697827, End: 3699080, Length: 1254

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:3866439:3881462388146238827151254Erwinia carotovora subsp. atroseptica SCRI1043, complete genomegamma-glutamyl phosphate reductase0761
NC_013421:3752619:3767431376743137686841254Pectobacterium wasabiae WPP163, complete genomegamma-glutamyl phosphate reductase0756
NC_014500:3744705:3765049376504937663021254Dickeya dadantii 3937 chromosome, complete genomegamma-glutamylphosphate reductase0667
NC_020211:996497:1001998100199810032511254Serratia marcescens WW4, complete genomegamma-glutamylphosphate reductase0652
NC_010634:1056441:1074550107455010758091260Yersinia pseudotuberculosis PB1/+, complete genomegamma-glutamyl phosphate reductase0652
NC_006155:1074298:1092407109240710936661260Yersinia pseudotuberculosis IP 32953, complete genomegamma-glutamyl phosphate reductase0652
NC_010465:3597000:3597278359727835985371260Yersinia pseudotuberculosis YPIII, complete genomegamma-glutamyl phosphate reductase0652
NC_009708:3542336:3543422354342235446811260Yersinia pseudotuberculosis IP 31758 chromosome, complete genomegamma-glutamyl phosphate reductase0652
NC_005810:754340:7725057725057737641260Yersinia pestis biovar Microtus str. 91001, complete genomegamma-glutamyl phosphate reductase0651
NC_004088:1075454:1092769109276910940281260Yersinia pestis KIM, complete genomegamma-glutamyl phosphate reductase0651
NC_008150:3015000:3016232301623230174911260Yersinia pestis Antiqua, complete genomegamma-glutamyl phosphate reductase0651
NC_010159:3502350:3503436350343635046951260Yersinia pestis Angola, complete genomegamma-glutamyl phosphate reductase0651
NC_008149:1002453:1019768101976810210271260Yersinia pestis Nepal516, complete genomegamma-glutamyl phosphate reductase0651
NC_003143:3583468:3584554358455435858131260Yersinia pestis CO92, complete genomegamma-glutamyl phosphate reductase0651
NC_009381:3228500:3228818322881832300771260Yersinia pestis Pestoides F chromosome, complete genomegamma-glutamyl phosphate reductase0651
NC_014029:3633955:3635041363504136363001260Yersinia pestis Z176003 chromosome, complete genomegamma-glutamyl phosphate reductase0651
NC_017154:3576256:3577342357734235786011260Yersinia pestis D106004 chromosome, complete genomegamma-glutamyl phosphate reductase0651
NC_017160:3560153:3561239356123935624981260Yersinia pestis D182038 chromosome, complete genomegamma-glutamyl phosphate reductase0651
NC_017168:2158839:2176154217615421774131260Yersinia pestis A1122 chromosome, complete genomegamma-glutamyl phosphate reductase0651
NC_017265:3375463:3376184337618433774431260Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,gamma-glutamylphosphate reductase0651
NC_021066:3028421:3033407303340730346601254Raoultella ornithinolytica B6, complete genomegamma-glutamyl phosphate reductase2e-177622
NC_012731:1088321:1102356110235611036091254Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomegamma-glutamyl phosphate reductase2e-176618
NC_020063:3690308:3741867374186737431201254Enterobacteriaceae bacterium strain FGI 57, complete genomeglutamate-5-semialdehyde dehydrogenase7e-176617
NC_011283:4438500:4443738444373844449911254Klebsiella pneumoniae 342 chromosome, complete genomegamma-glutamyl phosphate reductase4e-176617
NC_009648:293052:3173203173203185731254Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomegamma-glutamyl phosphate reductase9e-176616
NC_020260:3004500:3016421301642130176741254Cronobacter sakazakii Sp291, complete genomegamma-glutamyl phosphate reductase1e-175616
NC_016514:891772:8983428983428995951254Enterobacter cloacae EcWSU1 chromosome, complete genomegamma-glutamyl phosphate reductase3e-175615
NC_013282:923500:9285639285639298161254Cronobacter turicensis, complete genomeGamma-glutamyl phosphate reductase4e-175614
NC_014618:3700640:3712514371251437137671254Enterobacter cloacae SCF1 chromosome, complete genomegamma-glutamyl phosphate reductase5e-174610
NC_014121:1101093:1106436110643611076891254Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completegamma-glutamyl phosphate reductase6e-174610
NC_013716:357928:3621343621343633841251Citrobacter rodentium ICC168, complete genomegamma-glutamyl phosphate reductase2e-172605
NC_004741:310382:3123853123853136381254Shigella flexneri 2a str. 2457T, complete genomegamma-glutamyl phosphate reductase2e-171602
NC_004337:309833:3098333098333110861254Shigella flexneri 2a str. 301, complete genomegamma-glutamyl phosphate reductase2e-171602
NC_017328:303987:3089633089633102161254Shigella flexneri 2002017 chromosome, complete genomegamma-glutamyl phosphate reductase2e-171602
NC_007946:289425:2936972936972949501254Escherichia coli UTI89, complete genomegamma-glutamyl phosphate reductase2e-169595
NC_008563:287136:2936762936762949291254Escherichia coli APEC O1, complete genomegamma-glutamyl phosphate reductase2e-169595
NC_011742:291237:2936962936962949491254Escherichia coli S88 chromosome, complete genomegamma-glutamyl phosphate reductase2e-169595
NC_013508:876431:8819678819678832201254Edwardsiella tarda EIB202, complete genomegamma-glutamyl phosphate reductase2e-169595
NC_007384:307013:3134813134813147341254Shigella sonnei Ss046, complete genomegamma-glutamylphosphate reductase2e-169595
NC_009800:289000:2903732903732916261254Escherichia coli HS, complete genomegamma-glutamyl phosphate reductase2e-169595
NC_013361:313540:3200083200083212611254Escherichia coli O26:H11 str. 11368 chromosome, complete genomegamma-glutamyl phosphate reductase2e-169595
NC_011745:291422:2956232956232968761254Escherichia coli ED1a chromosome, complete genomegamma-glutamyl phosphate reductase4e-169594
NC_003197:367430:3674303674303686801251Salmonella typhimurium LT2, complete genomegamma-glutamyl phosphate reductase1e-168593
NC_016810:366908:3669083669083681581251Salmonella enterica subsp. enterica serovar Typhimurium strgamma-glutamyl phosphate reductase1e-168593
NC_016856:365665:3681153681153693651251Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sgamma-glutamyl phosphate reductase1e-168593
NC_016857:366908:3669083669083681581251Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74gamma-glutamyl phosphate reductase1e-168593
NC_016860:364981:3674313674313686811251Salmonella enterica subsp. enterica serovar Typhimurium strgamma-glutamyl phosphate reductase1e-168593
NC_016863:367404:3674043674043686541251Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1gamma-glutamyl phosphate reductase1e-168593
NC_017046:366905:3669053669053681551251Salmonella enterica subsp. enterica serovar Typhimurium str. 798gamma-glutamyl phosphate reductase1e-168593
NC_004431:364000:3688563688563701091254Escherichia coli CFT073, complete genomegamma-glutamyl phosphate reductase8e-169593
NC_006905:368942:3713913713913726411251Salmonella enterica subsp. enterica serovar Choleraesuis strgamma-glutamyl phosphate reductase2e-168592
NC_011294:346915:3469153469153481621248Salmonella enterica subsp. enterica serovar Enteritidis strgamma-glutamyl phosphate reductase3e-168591
NC_011205:371001:3710013710013722481248Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gamma-glutamyl phosphate reductase3e-168591
NC_010498:301000:3052713052713065241254Escherichia coli SMS-3-5, complete genomegamma-glutamyl phosphate reductase4e-168591
NC_011083:374000:3753943753943766441251Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,glutamate-5-semialdehyde dehydrogenase4e-168591
NC_015761:299386:3031903031903044401251Salmonella bongori NCTC 12419, complete genomegamma-glutamyl phosphate reductase6e-168590
NC_016832:2581145:2600031260003126012811251Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Gamma-glutamyl phosphate reductase5e-166584
NC_004631:2584244:2603130260313026043801251Salmonella enterica subsp. enterica serovar Typhi Ty2, completegamma-glutamyl phosphate reductase5e-166584
NC_012779:916000:9174509174509185201071Edwardsiella ictaluri 93-146, complete genomeglutamate-5-semialdehyde dehydrogenase, putative9e-150530
NC_016513:54802:6829968299694381140Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completegamma-glutamyl phosphate reductase1e-126452
NC_014314:238043:2823482823482836191272Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completegamma-glutamyl phosphate reductase1e-109397
NC_016751:2044379:2062412206241220636561245Marinitoga piezophila KA3 chromosome, complete genomegamma-glutamyl phosphate reductase5e-101368
NC_015873:2260048:2280960228096022822041245Megasphaera elsdenii DSM 20460, complete genomegamma-glutamyl phosphate reductase5e-101368
NC_018664:1279950:1286848128684812880951248Clostridium acidurici 9a chromosome, complete genomegamma-glutamyl phosphate reductase ProA8e-100364
NC_013199:2386924:2403606240360624048621257Lactobacillus rhamnosus Lc 705, complete genomegamma-glutamyl phosphate reductase (GPR) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)7e-99360
NC_010999:2483000:2496204249620424974601257Lactobacillus casei, complete genomeGamma-glutamyl phosphate reductase (GPR) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)5e-96351
NC_004070:1409714:1408471140847114097211251Streptococcus pyogenes MGAS315, complete genomegamma-glutamyl phosphate reductase2e-93343
NC_004606:470667:4871644871644884141251Streptococcus pyogenes SSI-1, complete genomegamma-glutamyl phosphate reductase2e-93343
NC_013205:2922343:2947213294721329484991287Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,gamma-glutamyl phosphate reductase7e-93341
NC_014650:1410790:1432142143214214333831242Geobacillus sp. Y4.1MC1 chromosome, complete genomegamma-glutamyl phosphate reductase7e-93341
NC_010483:642577:6532356532356544821248Thermotoga sp. RQ2, complete genomegamma-glutamyl phosphate reductase3e-92339
NC_015499:1403447:1408165140816514094301266Thermodesulfobium narugense DSM 14796 chromosome, complete genomeGamma-glutamyl phosphate reductase4e-92338
NC_013642:942767:9660019660019672481248Thermotoga naphthophila RKU-10, complete genomegamma-glutamyl phosphate reductase4e-92338
NC_011979:646518:6742636742636755191257Geobacter sp. FRC-32, complete genomegamma-glutamyl phosphate reductase2e-90332
NC_021175:751616:7516167516167528781263Streptococcus oligofermentans AS 1.3089, complete genomegamma-glutamyl phosphate reductase3e-89329
NC_016584:3645245:3650810365081036520571248Desulfosporosinus orientis DSM 765 chromosome, complete genomegamma-glutamyl phosphate reductase2e-89329
NC_015588:2200517:2221613222161322229291317Isoptericola variabilis 225 chromosome, complete genomeGamma-glutamyl phosphate reductase4e-89328
NC_013851:2441407:2454628245462824559021275Allochromatium vinosum DSM 180 chromosome, complete genomegamma-glutamyl phosphate reductase4e-87322
NC_014323:625155:6495836495836508511269Herbaspirillum seropedicae SmR1 chromosome, complete genomegamma-glutamyl phosphate reductase7e-87321
NC_010162:5129270:5145158514515851464381281Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-86319
NC_014623:2283253:2301701230170123029691269Stigmatella aurantiaca DW4/3-1 chromosome, complete genomegamma-glutamyl phosphate reductase6e-84311
NC_015587:583530:6060946060946074191326Hydrogenobaculum sp. SHO chromosome, complete genomeGamma-glutamyl phosphate reductase2e-83310
NC_020411:583503:6060676060676073921326Hydrogenobaculum sp. HO, complete genomeglutamate-5-semialdehyde dehydrogenase2e-83310
NC_015557:583475:6060396060396073641326Hydrogenobaculum sp. 3684 chromosome, complete genomegamma-glutamyl phosphate reductase2e-83310
NC_009654:3215205:3227847322784732291061260Marinomonas sp. MWYL1, complete genomegamma-glutamyl phosphate reductase2e-82306
NC_011883:519308:5328745328745341451272Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,gamma-glutamyl phosphate reductase1e-81303
NC_005125:4117096:4117096411709641183551260Gloeobacter violaceus PCC 7421, complete genomegamma-glutamyl phosphate reductase2e-81303
NC_009665:5072413:5113207511320751144541248Shewanella baltica OS185 chromosome, complete genomegamma-glutamyl phosphate reductase6e-80298
NC_007955:2531751:2542356254235625437051350Methanococcoides burtonii DSM 6242, complete genomegamma-glutamyl phosphate reductase8e-80297
NC_005956:196976:2214442214442226821239Bartonella henselae str. Houston-1, complete genomeGamma-glutamyl phosphate reductase9e-80297
NC_003317:190975:2143162143162155961281Brucella melitensis 16M chromosome I, complete sequencegamma-glutamyl phosphate reductase1e-78294
NC_020301:174467:2031642031642044201257Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomegamma-glutamyl phosphate reductase1e-78293
NC_005955:173436:1962621962621975001239Bartonella quintana str. Toulouse, complete genomeGamma-glutamyl phosphate reductase4e-78292
NC_014002:631649:6363876363876377301344Methanohalophilus mahii DSM 5219 chromosome, complete genomeglutamate-5-semialdehyde dehydrogenase5e-78291
NC_012803:1094679:1094679109467910960281350Micrococcus luteus NCTC 2665, complete genomeglutamate-5-semialdehyde dehydrogenase6e-78291
NC_018876:1121268:1140105114010511414601356Methanolobus psychrophilus R15 chromosome, complete genomegamma-glutamyl phosphate reductase1e-77290
NC_016627:1213357:1217171121717112184661296Clostridium clariflavum DSM 19732 chromosome, complete genomeglutamate-5-semialdehyde dehydrogenase9e-77287
NC_010161:205500:2291572291572304131257Bartonella tribocorum CIP 105476, complete genomehypothetical protein9e-77287
NC_003047:3419212:3443374344337434446571284Sinorhizobium meliloti 1021, complete genomegamma-glutamyl phosphate reductase3e-76285
NC_019977:1996414:2014069201406920154301362Methanomethylovorans hollandica DSM 15978, complete genomegamma-glutamyl phosphate reductase3e-75282
NC_016894:3114394:3115855311585531171501296Acetobacterium woodii DSM 1030 chromosome, complete genomegamma-glutamyl phosphate reductase3e-75282
NC_014923:1249267:1269522126952212708081287Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completegamma-glutamyl phosphate reductase3e-75282
NC_009614:769851:7822917822917835441254Bacteroides vulgatus ATCC 8482 chromosome, complete genomegamma-glutamyl phosphate reductase2e-74279
NC_008380:4968492:4986092498609249873751284Rhizobium leguminosarum bv. viciae 3841, complete genomeputative gamma-glutamyl phosphate reductase3e-74279
NC_014932:1232346:1233955123395512352231269Bartonella clarridgeiae 73, complete genomeGamma-glutamyl phosphate reductase5e-74278
NC_015593:2103815:2142420214242021437211302Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeGamma-glutamyl phosphate reductase7e-74278
NC_009429:686608:7027847027847040461263Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completegamma-glutamyl phosphate reductase1e-73277
NC_007514:1475323:1489710148971014909661257Chlorobium chlorochromatii CaD3, complete genomegamma-glutamyl phosphate reductase3e-73276
NC_014253:795869:8150308150308163761347Methanohalobium evestigatum Z-7303 chromosome, complete genomegamma-glutamyl phosphate reductase3e-73276
NC_011565:1054414:1055500105550010567591260Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,glutamate-5-semialdehyde dehydrogenase5e-72271
NC_011884:4366831:4369073436907343703741302Cyanothece sp. PCC 7425, complete genomegamma-glutamyl phosphate reductase1e-71270
NC_009337:1448607:1448607144860714498751269Chlorobium phaeovibrioides DSM 265 chromosome, complete genomegamma-glutamyl phosphate reductase2e-71269
NC_006677:1255079:1256139125613912574221284Gluconobacter oxydans 621H, complete genomeGamma-glutamyl phosphate reductase2e-68259
NC_018644:137755:1720491720491733021254Alpha proteobacterium HIMB59 chromosome, complete genomeglutamate-5-semialdehyde dehydrogenase4e-67255
NC_007205:221539:2236202236202248701251Candidatus Pelagibacter ubique HTCC1062, complete genomeGamma-glutamyl phosphate reductase3e-63242
NC_016078:3130573:3150912315091231521951284Pelagibacterium halotolerans B2 chromosome, complete genomegamma-glutamyl phosphate reductase1e-62240
NC_015638:591964:5919645919645931661203Lacinutrix sp. 5H-3-7-4 chromosome, complete genomegamma-glutamyl phosphate reductase3e-58226
NC_016001:2421580:2427675242767524288711197Flavobacterium branchiophilum, complete genomeglutamate-5-semialdehyde dehydrogenase5e-55215
NC_015167:724934:7249347249347261331200Cellulophaga lytica DSM 7489 chromosome, complete genomegamma-glutamyl phosphate reductase2e-53210
NC_013161:1801904:1825588182558818268501263Cyanothece sp. PCC 8802, complete genomeGlutamate-5-semialdehyde dehydrogenase2e-38160
NC_009922:868262:8777758777758792531479Alkaliphilus oremlandii OhILAs, complete genomeacetaldehyde dehydrogenase (acetylating)2e-0860.5
NC_003366:1091766:1103887110388711053651479Clostridium perfringens str. 13, complete genomeprobable alcohol dehydrogenase6e-0755.8
NC_008261:1048515:1060624106062410621021479Clostridium perfringens ATCC 13124, complete genomeethanolamine utilization protein6e-0755.8
NC_016048:1580352:1593486159348615962572772Oscillibacter valericigenes Sjm18-20, complete genomeacetaldehyde dehydrogenase/alcohol dehydrogenase8e-0755.5
NC_015602:1339067:1339067133906713416942628Lactobacillus kefiranofaciens ZW3 chromosome, complete genomebifunctional acetaldehyde-CoA/alcohol dehydrogenase7e-0755.5
NC_014376:1586649:1599258159925816007361479Clostridium saccharolyticum WM1 chromosome, complete genomeacetaldehyde dehydrogenase (acetylating)1e-0655.1
NC_009633:3933941:3941058394105839425841527Alkaliphilus metalliredigens QYMF chromosome, complete genomeacetaldehyde dehydrogenase2e-0654.3
NC_007930:180281:1914701914701941272658Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Alcohol dehydrogenase / Acetaldehyde dehydrogenase2e-0653.9
NC_020419:870160:8730338730338756782646Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completealdehyde-alcohol dehydrogenase4e-0652.8
NS_000191:870160:8730338730338756782646Uncultured Termite group 1 bacterium phylotype Rs-D17, completealdehyde-alcohol dehydrogenase4e-0652.8
NC_014824:133065:1396181396181423352718Ruminococcus albus 7 plasmid pRUMAL01, complete sequenceiron-containing alcohol dehydrogenase8e-0652