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Query: NC_012917:3684840:3693835 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3693835, End: 3694950, Length: 1116

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:2870428:2879530287953028806451116Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein1e-164579
NC_010102:2862178:2869904286990428710611158Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-101367
NC_010801:238430:2481422481422493381197Burkholderia multivorans ATCC 17616 chromosome 3, completehypothetical protein5e-51201
NC_008577:2402165:2427014242701424281471134Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein5e-50198
NC_011663:2813033:2820851282085128220501200Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-48193
NC_012691:2476223:2488000248800024891481149Tolumonas auensis DSM 9187, complete genomehypothetical protein9e-40164
NC_004547:1837500:1853836185383618548791044Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-29130
NC_012225:1497934:1510698151069815117351038Brachyspira hyodysenteriae WA1, complete genomehypothetical protein7e-27121
NC_004578:4869673:487864148786414879582942Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-1169.7
NC_009720:5046861:5056659505665950580501392Xanthobacter autotrophicus Py2, complete genomehypothetical protein2e-0963.9