Pre_GI: BLASTP Hits

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Query: NC_012917:3684840:3692075 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3692075, End: 3693847, Length: 1773

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:2870428:2880633288063328824021770Salmonella enterica subsp. enterica serovar Newport str. SL254,domain of unknown function protein0944
NC_010102:2862178:2871049287104928728241776Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0645
NC_012691:2476223:2486206248620624879901785Tolumonas auensis DSM 9187, complete genomeprotein of unknown function DUF877e-124444
NC_008577:2402165:2428148242814824299171770Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein7e-115414
NC_011663:2813033:2822047282204728238251779Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-112407
NC_012225:1497934:1511740151174015135841845Brachyspira hyodysenteriae WA1, complete genomehypothetical protein9e-87321
NC_004547:1837500:1851992185199218538391848Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-86320
NC_010801:238430:250589250589251125537Burkholderia multivorans ATCC 17616 chromosome 3, complete7e-61235
NC_010801:238430:2493382493382505881251Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-53209
NC_008380:2210649:224639622463962247325930Rhizobium leguminosarum bv. viciae 3841, complete genomehypothetical protein2e-48194
NC_009050:212270:2400382400382420171980Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceATPase-like protein1e-28128
NC_016616:915755:9230349230349248631830Dechlorosoma suillum PS chromosome, complete genomeputative ATPase6e-28126
NC_007005:98488:1094521094521113231872Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF879e-26119
NC_010729:1014957:1032705103270510346061902Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein2e-25117
NC_015138:4205986:4219403421940342211361734Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein1e-24115
NC_020409:2222000:2232477223247722343481872Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein3e-23110
NC_012997:817553:8307608307608326011842Teredinibacter turnerae T7901, complete genomehypothetical protein4e-23110
NC_015177:1950461:1950461195046119525902130Pedobacter saltans DSM 12145 chromosome, complete genomehypothetical protein6e-23109
NC_009708:4182460:4191576419157641933811806Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-22107
NC_004578:4869673:4882082488208248833651284Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein7e-1892.4
NC_003919:2824000:2844297284429728464142118Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein3e-1790.5
NC_006513:1379735:1448117144811714502402124Azoarcus sp. EbN1, complete genomehypothetical protein1e-1688.2
NC_018867:993903:1001287100128710030621776Dehalobacter sp. CF chromosome, complete genomeprotein of unknown function DUF872e-1687.8
NC_018866:925704:9366669366669384411776Dehalobacter sp. DCA chromosome, complete genomeBipolar DNA helicase2e-1687.8
NC_011662:535613:5407325407325424651734Thauera sp. MZ1T, complete genomeprotein of unknown function DUF875e-1686.7
NC_015573:569625:6010336010336032402208Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein6e-1686.3
NC_014209:761832:7644937644937667932301Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,protein of unknown function DUF871e-1585.5
NC_009719:1135523:1145974114597411479982025Parvibaculum lavamentivorans DS-1 chromosome, complete genomeATPase-like protein1e-1585.1
NC_015160:2145915:2159124215912421612142091Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein1e-1585.1
NC_008786:3845988:3855648385564838573721725Verminephrobacter eiseniae EF01-2, complete genomeATPase-like protein3e-1584
NC_017271:149856:1608281608281626601833Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein3e-1584
NC_010125:955863:9786589786589804841827Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein3e-1584
NC_009720:5046861:5058053505805350600471995Xanthobacter autotrophicus Py2, complete genomeATPase-like protein7e-1582.8
NC_008639:1462000:1471367147136714731661800Chlorobium phaeobacteroides DSM 266, complete genomeprotein of unknown function DUF872e-1481.6
NC_011004:4183993:4209018420901842107631746Rhodopseudomonas palustris TIE-1, complete genomeprotein of unknown function DUF871e-1379
NC_010623:2057467:2072078207207820737901713Burkholderia phymatum STM815 chromosome 2, complete sequenceprotein of unknown function DUF871e-1378.6
NC_000868:1168819:1173575117357511752211647Pyrococcus abyssi GE5, complete genomehypothetical protein3e-1377.4
NC_012660:165559:1904011904011922331833Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein4e-1377
NC_015565:287900:3092013092013108861686Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein1e-1275.1
NC_013406:7024149:7052006705200670537961791Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein2e-1274.3
NC_020304:3029243:3038157303815730393561200Desulfocapsa sulfexigens DSM 10523, complete genomeputative ATPase8e-1272.4
NC_009050:212270:2580402580402597791740Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencehypothetical protein1e-1172
NC_020541:2769419:2785343278534327872471905Rhodanobacter sp. 2APBS1, complete genomeputative ATPase2e-1171.2
NC_020829:2152000:2161000216100021629041905Pseudomonas denitrificans ATCC 13867, complete genomeATPase4e-1170.1
NC_014972:137184:1478981478981497901893Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein7e-1169.7
NC_016024:1099602:1108817110881711106191803Candidatus Chloracidobacterium thermophilum B chromosome chromosomeputative ATPase6e-1169.7
NC_014537:603564:6071166071166090381923Vulcanisaeta distributa DSM 14429 chromosome, complete genomehypothetical protein6e-1169.7
NC_009901:2272206:2279689227968922813411653Shewanella pealeana ATCC 700345, complete genomeprotein of unknown function DUF879e-1168.9
NC_015635:4097711:4127390412739041291381749Microlunatus phosphovorus NM-1, complete genomehypothetical protein9e-1168.9
NC_011071:1877500:1884907188490718866821776Stenotrophomonas maltophilia R551-3, complete genomeprotein of unknown function DUF871e-1068.6
NC_002947:4994335:5042929504292950446921764Pseudomonas putida KT2440, complete genomehypothetical protein2e-1068.2
NC_013205:1275012:1290516129051612922431728Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,protein of unknown function DUF871e-1068.2
NC_015320:1342105:1380643138064313822201578Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein3e-1067.4
NC_009441:4357593:4378411437841143801951785Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein3e-1067.4
NC_019792:2524130:2555390255539025570331644Natronobacterium gregoryi SP2 chromosome, complete genomeATPase3e-1067.4
NC_015151:1427965:1431000143100014329221923Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeATPase6e-1066.2
NC_014311:1106871:1114757111475711164541698Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein1e-0965.5
NC_014011:962474:9707139707139724821770Aminobacterium colombiense DSM 12261 chromosome, complete genomeprotein of unknown function DUF871e-0965.5
NC_015519:2413323:2416193241619324178781686Tepidanaerobacter sp. Re1 chromosome, complete genomehypothetical protein1e-0965.1
NC_019791:570923:5872775872775888151539Caldisphaera lagunensis DSM 15908 chromosome, complete genomeATPase2e-0965.1
NC_015931:1443447:1452914145291414544131500Pyrolobus fumarii 1A, complete genomeHerA-ATP synthase with barrel domain5e-0963.5
NC_015680:1315040:1337033133703313389491917Pyrococcus yayanosii CH1 chromosome, complete genomehypothetical protein5e-0963.2
NC_016885:1153277:1154428115442811562781851Pyrobaculum oguniense TE7 chromosome, complete genomeputative ATPase6e-0963.2
NC_013665:918313:9209109209109224391530Methanocella paludicola SANAE, complete genomehypothetical protein1e-0862
NC_013037:5395951:5403792540379254055731782Dyadobacter fermentans DSM 18053, complete genomeprotein of unknown function DUF872e-0861.6
NC_003413:1107965:1111866111186611135211656Pyrococcus furiosus DSM 3638, complete genomehypothetical protein2e-0861.2
NC_017068:1450049:1463663146366314671003438Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-0758.9
NC_015474:1490668:1507956150795615095961641Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein2e-0758.2
NC_009659:1:7435743590241590Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein2e-0757.8
NC_013421:478586:4854094854094869891581Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF872e-0757.8
NC_012440:423217:4442174442174461631947Persephonella marina EX-H1, complete genomehypothetical protein3e-0757.4
NC_009523:2769154:2776947277694727789021956Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein3e-0757.4
NC_021184:1484352:1506874150687415086191746Desulfotomaculum gibsoniae DSM 7213, complete genomeputative ATPase5e-0756.6
NC_010999:1381497:1390147139014713912261080Lactobacillus casei, complete genomePutative uncharacterized protein6e-0756.2
NC_014122:726070:7362547362547378971644Methanocaldococcus infernus ME chromosome, complete genomeprotein of unknown function DUF877e-0756.2
NC_010999:1381497:138947013894701390051582Lactobacillus casei, complete genomePutative uncharacterized protein1e-0655.5
NC_014160:748743:7835657835657851061542Thermosphaera aggregans DSM 11486 chromosome, complete genomehypothetical protein1e-0655.5
NC_015216:2113556:2124209212420921257441536Methanobacterium sp. AL-21 chromosome, complete genomehypothetical protein1e-0655.5
NC_000961:828416:8419908419908436571668Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-0654.7
NC_011770:2499432:2534701253470125363861686Pseudomonas aeruginosa LESB58, complete genomeprotein of unknown function DUF872e-0654.7