Pre_GI: BLASTP Hits

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Query: NC_012917:3684840:3691566 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3691566, End: 3691814, Length: 249

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:442927:473425473425473673249Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative bacteriophage regulatory protein1e-39161
NC_004547:3866439:387425338742533874501249Erwinia carotovora subsp. atroseptica SCRI1043, complete genomebacteriophage regulatory protein2e-36150
NC_012917:833721:839975839975840223249Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional activator Ogr/delta4e-36149
NC_009436:3367194:337924033792403379503264Enterobacter sp. 638, complete genomephage transcriptional activator, Ogr/delta2e-1994
NC_021066:5342127:536065053606505360895246Raoultella ornithinolytica B6, complete genomephage transcriptional activator, Ogr/delta3e-1787
NC_016845:575123:588240588240588485246Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,phage transcriptional activator, Ogr/delta1e-1685.1
NC_013508:3593000:361099636109963611235240Edwardsiella tarda EIB202, complete genomebacteriophage gene regulatory protein4e-1580.1
NC_014121:677799:689843689843690061219Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacteriophage gene regulatory protein3e-1477
NC_011080:2870428:288319228831922883437246Salmonella enterica subsp. enterica serovar Newport str. SL254,phage transcriptional activator, Ogr/delta2e-1374.7
NC_003198:4676536:468932346893234689562240Salmonella enterica subsp. enterica serovar Typhi str. CT18,bacteriophage gene regulatory protein2e-1374.3
NC_004631:4661000:467221246722124672451240Salmonella enterica subsp. enterica serovar Typhi Ty2, completebacteriophage gene regulatory protein2e-1374.3
NC_006511:4465495:446525344652534465498246Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein8e-1372.4
NC_010102:2862178:286276128627612863006246Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-1372.4
NC_011147:4460726:446048444604844460729246Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-1372.4
NC_010468:49074:512145121451456243Escherichia coli ATCC 8739, complete genometranscriptional activator Ogr/delta3e-1270.9
NC_016835:128757:133759133759133980222Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,Ogr/Delta-like zinc finger9e-1268.9
NC_020064:871338:880827880827881060234Serratia marcescens FGI94, complete genomeOgr/Delta-like zinc finger2e-1167.4
NC_014837:3739408:375358937535893753807219Pantoea sp. At-9b chromosome, complete genometranscriptional activator Ogr/delta5e-1166.6
NC_014306:4376012:441318944131894413461273Erwinia billingiae Eb661, complete genomePutative Ogr family phage transcription activator5e-1166.6
NC_014306:4901390:494241749424174942689273Erwinia billingiae Eb661, complete genomephage transcriptional activator, Ogr/Delta5e-1166.2
NC_016816:674171:680173680173680394222Pantoea ananatis LMG 5342, complete genometranscriptional activator Ogr/delta1e-1065.1
NC_009801:995396:101664810166481016866219Escherichia coli E24377A, complete genomephage transcriptional activator, Ogr/Delta1e-1065.1
NC_016810:2871689:289502528950252895267243Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage gene regulatory protein2e-1064.7
NC_020211:996497:100815510081551008409255Serratia marcescens WW4, complete genomebacteriophage regulatory protein2e-1064.3
NC_011740:810411:824270824270824551282Escherichia fergusonii ATCC 35469, complete genomeputative activator from phage origin ( Ogr family transcription activator)2e-1064.3
NC_012880:2480000:249015824901582490352195Dickeya dadantii Ech703, complete genometranscriptional activator Ogr/delta3e-1063.9
NC_013956:4326388:433082043308204331095276Pantoea ananatis LMG 20103 chromosome, complete genomeB1e-0962
NC_009778:567000:598018598018598269252Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0962
NC_015968:3301958:332969733296973329969273Enterobacter asburiae LF7a chromosome, complete genometranscriptional activator Ogr/delta4e-0960.1
NC_006155:2084669:209720720972072097422216Yersinia pseudotuberculosis IP 32953, complete genomeprophage p2 ogr protein7e-0959.3
NC_002655:301940:315678315678315950273Escherichia coli O157:H7 EDL933, complete genomeputative activator encoded in prophage CP-933I1e-0858.5
NC_002695:301939:315677315677315949273Escherichia coli O157:H7 str. Sakai, complete genomeputative Ogr family transcription activator1e-0858.5
NC_013008:306953:320869320869321141273Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeactivator encoded in prophage CP-933I1e-0858.5
NC_013941:338121:356666356666356938273Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeactivator encoded in prophage CP-933I1e-0858.5
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-0858.2
NC_003198:4453457:447443744744374474655219Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative positive regulator of late gene transcription3e-0857.4
NC_016818:4215836:423853442385344238710177Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeOgr/Delta-like zinc finger9e-0855.8
NC_010465:2582080:258663725866372586852216Yersinia pseudotuberculosis YPIII, complete genometranscriptional activator Ogr/delta1e-0755.1
NC_016612:3361802:337305933730593373277219Klebsiella oxytoca KCTC 1686 chromosome, complete genomeprophage P2 OGR-like protein1e-0755.1
NC_016628:373815:391554391554391790237Vibrio furnissii NCTC 11218 chromosome 2, complete sequencePhage transcriptional activator, Ogr/Delta1e-0755.1
NC_017047:3174588:319277031927703192973204Rahnella aquatilis HX2 chromosome, complete genometranscriptional activator Ogr/delta2e-0754.7
NC_015224:2061951:207877820787782078993216Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Phage transcriptional activator, Ogr/Delta2e-0754.3
NC_012779:3016327:302766830276683027898231Edwardsiella ictaluri 93-146, complete genometranscriptional activator Ogr/delta2e-0651.6
NC_004547:913553:922585922585922755171Erwinia carotovora subsp. atroseptica SCRI1043, complete genomephage regulatory protein2e-0651.2
NC_011740:448000:454181454181454681501Escherichia fergusonii ATCC 35469, complete genomeTransactivation protein3e-0650.4
NC_010468:1130000:115235411523541152854501Escherichia coli ATCC 8739, complete genometranscriptional activator Ogr/delta4e-0650.1
NC_013361:4959323:496146849614684961968501Escherichia coli O26:H11 str. 11368 chromosome, complete genometransactivation protein4e-0650.1
NC_007712:3163000:318267231826723182890219Sodalis glossinidius str. 'morsitans', complete genomeputative phage late gene regulator8e-0648.9