Pre_GI: BLASTP Hits

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Query: NC_012917:3684840:3688427 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3688427, End: 3688768, Length: 342

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:833721:836847836847837188342Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein9e-43171
NC_009778:567000:595168595168595509342Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-22104
NC_020211:996497:101098110109811011316336Serratia marcescens WW4, complete genomehypothetical protein3e-21100
NC_020211:103371:103819103819104154336Serratia marcescens WW4, complete genomehypothetical protein4e-21100
NC_011080:4703266:471862547186254718948324Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein6e-1166.2
NC_013508:2870954:288127128812712881606336Edwardsiella tarda EIB202, complete genomehypothetical protein9e-1062.4
NC_014306:4376012:440977844097784410101324Erwinia billingiae Eb661, complete genomehypothetical protein2e-0961.2
NC_014306:4901390:493900449390044939327324Erwinia billingiae Eb661, complete genomePutative phage-related protein2e-0961.2
NC_007613:4217557:421990542199054220225321Shigella boydii Sb227, complete genomeputative protein encoded in prophage2e-0961.2
NC_010498:4072681:408952840895284089848321Escherichia coli SMS-3-5, complete genomehypothetical protein2e-0961.2
NC_010468:1130000:114903411490341149354321Escherichia coli ATCC 8739, complete genomeputative protein encoded in prophage2e-0961.2
NC_016857:2871689:289757428975742897894321Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74P4 phage protein4e-0960.1
NC_016810:2871689:289757428975742897894321Salmonella enterica subsp. enterica serovar Typhimurium strP4 bacteriophage protein4e-0960.1
NC_004631:4661000:467476646747664675086321Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical P4 phage protein4e-0960.1
NC_003198:4676536:469187746918774692197321Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical P4 phage protein4e-0960.1
NC_011080:2870428:288575328857532886073321Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical P4 phage protein5e-0959.7
NC_013508:3593000:360638036063803606700321Edwardsiella tarda EIB202, complete genomehypothetical protein7e-0959.3
NC_011147:4460726:446303644630364463356321Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-0958.9
NC_006511:4465495:446780644678064468126321Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical P4 phage protein8e-0958.9
NC_011740:448000:450850450850451170321Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from phage origin9e-0958.9
NC_010102:2862178:286531328653132865633321Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0858.9
NC_014121:677799:692388692388692708321Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeP4 phage protein1e-0858.9
NC_002655:301940:319222319222319545324Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded in prophage CP-933I1e-0858.5
NC_002695:301939:319221319221319544324Escherichia coli O157:H7 str. Sakai, complete genomeCnr-like protein1e-0858.5
NC_011353:305820:323101323101323424324Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-0858.5
NC_013008:306953:324413324413324736324Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-0858.5
NC_013941:338121:360195360195360518324Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-0858.5
NC_016845:575123:590812590812591132321Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,P4 phage protein1e-0858.5
NC_009436:3367194:338182933818293382149321Enterobacter sp. 638, complete genomeP4 phage protein2e-0857.8
NC_021066:5342127:535802453580245358344321Raoultella ornithinolytica B6, complete genomeDNA replication protein3e-0857.4
NC_013956:3273340:327334032733403273663324Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein7e-0649.3