Pre_GI: BLASTP Hits

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Query: NC_012917:3684840:3685324 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3685324, End: 3685908, Length: 585

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:3866439:387346738734673874063597Erwinia carotovora subsp. atroseptica SCRI1043, complete genomecell filamentation protein6e-103372
NC_016830:4639388:465094846509484651547600Pseudomonas fluorescens F113 chromosome, complete genomecell filamentation protein fic1e-54212
NC_015578:2026741:205741820574182058023606Treponema primitia ZAS-2 chromosome, complete genomeFic protein family4e-32137
NC_018870:757416:770804770804771439636Thermacetogenium phaeum DSM 12270 chromosome, complete genomeadenosine monophosphate-protein transferase Fic4e-32137
NC_010337:591264:604652604652605287636Heliobacterium modesticaldum Ice1, complete genomecell filamentation protein fic, putative4e-32137
NC_014844:442380:463353463353463940588Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-29129
NC_016048:2678205:268533326853332685929597Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein4e-27120
NC_011035:1033942:104923510492351049729495Neisseria gonorrhoeae NCCP11945 chromosome, complete genomecell filamentation protein2e-26118
NC_017511:950411:965030965030965524495Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomecell filamentation protein2e-26118
NC_014844:511552:523531523531524118588Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefilamentation induced by cAMP protein Fic3e-25114
NC_014816:545441:561824561824562423600Asticcacaulis excentricus CB 48 chromosome 1, complete sequencefilamentation induced by camp protein fic2e-21102
NC_009719:336000:337401337401337976576Parvibaculum lavamentivorans DS-1 chromosome, complete genomefilamentation induced by cAMP protein fic8e-21100
NC_017219:1163000:116712811671281167895768Bifidobacterium longum subsp. infantis ATCC 15697, complete genomecell filamentation protein9e-2199.8
NC_011593:1163000:116733711673371168104768Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,filamentation induced by cAMP protein fic9e-2199.8
NC_017187:814940:825534825534826145612Arcobacter butzleri ED-1, complete genomeputative cell filamentation protein9e-2199.8
NC_014616:1415951:142944214294421430212771Bifidobacterium bifidum S17 chromosome, complete genomeFic family protein1e-2099.8
NC_005956:1521736:1521736152173615233701635Bartonella henselae str. Houston-1, complete genomePutative cell filamentation protein3e-2097.8
NC_005956:1521736:1528692152869215302901599Bartonella henselae str. Houston-1, complete genomePutative cell filamentation protein4e-2097.4
NC_008726:3858209:387762838776283878266639Mycobacterium vanbaalenii PYR-1, complete genomefilamentation induced by cAMP protein Fic3e-1994.7
NC_010399:13222:340933409334674582Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completecell filamentation protein4e-1994.7
NC_005955:1259393:1263630126363012652311602Bartonella quintana str. Toulouse, complete genomePutative cell filamentation protein2e-1788.6
NC_012846:1679184:1679184167918416808181635Bartonella grahamii as4aup, complete genomeBepA protein2e-1788.6
NC_020301:1449616:1452979145297914546071629Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeBep protein5e-1787.4
NC_020301:1449616:1457313145731314589111599Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeBep protein1e-1686.3
NC_015977:2966971:298546429854642985943480Roseburia hominis A2-183 chromosome, complete genomecell filamentation protein fic3e-1685.1
NC_014618:690056:699310699310699864555Enterobacter cloacae SCF1 chromosome, complete genomefilamentation induced by cAMP protein fic2e-1582
NC_005956:1521736:1525994152599415276221629Bartonella henselae str. Houston-1, complete genomehypothetical protein4e-1580.9
NC_010404:55908:700737007370585513Acinetobacter baumannii plasmid p3ABAYE, complete sequence1e-1479.7
NC_020301:1449616:1450976145097614526041629Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeBep protein1e-1479.7
NC_010465:660207:672399672399673013615Yersinia pseudotuberculosis YPIII, complete genomefilamentation induced by cAMP protein Fic1e-1479.7
NC_015458:3077804:308985430898543090483630Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein2e-1375.5
NC_010161:1811000:1814544181454418161421599Bartonella tribocorum CIP 105476, complete genomehypothetical protein2e-1375.5
NC_013210:57881:7158771587726331047Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, completecell filamentation cAMP-inducing protein Fic2e-1375.5
NC_017101:54767:7121571215722611047Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, completecell filamentation cAMP-inducing protein Fic2e-1375.5
NC_017117:54767:7121571215722611047Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-010, completecell filamentation cAMP-inducing protein Fic2e-1375.5
NC_017130:54759:7120771207722531047Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, completecell filamentation cAMP-inducing protein Fic2e-1375.5
NC_017134:54783:7123171231722771047Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, completecell filamentation cAMP-inducing protein Fic2e-1375.5
NC_017136:54751:7119971199722451047Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, completecell filamentation cAMP-inducing protein Fic2e-1375.5
NC_017143:54767:7121571215722611047Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-010, completecell filamentation cAMP-inducing protein Fic2e-1375.5
NC_012846:1679184:1692301169230116955103210Bartonella grahamii as4aup, complete genomeBepI protein4e-1374.3
NC_012846:1679184:1684104168410416857021599Bartonella grahamii as4aup, complete genomeBepC protein5e-1373.9
NC_014158:233733:2337332337332348271095Tsukamurella paurometabola DSM 20162 chromosome, complete genomefilamentation induced by cAMP protein Fic7e-1373.6
NC_009708:633054:645306645306645863558Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeFic family protein3e-1271.6
NC_014246:57021:762257622577034810Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative cell filamentation protein4e-1271.2
NC_014549:14000:252042520426022819Arthrobacter arilaitensis Re117 plasmid pRE117-1, completeFic family protein4e-1271.2
NC_010161:1811000:1823441182344118258132373Bartonella tribocorum CIP 105476, complete genomeBepI protein5e-1270.9
NC_010163:1361217:137194313719431372542600Acholeplasma laidlawii PG-8A chromosome, complete genomeFic-like protein3e-1168.2
NC_019960:1198067:120932812093281210239912Prevotella dentalis DSM 3688 chromosome 1, complete sequenceprotein involved in cell division3e-1064.7
NC_005955:1259393:1259393125939312609071515Bartonella quintana str. Toulouse, complete genome1e-0963.2
NC_010376:186510:229294229294229869576Finegoldia magna ATCC 29328, complete genomeputative cell filamentation protein1e-0962.8
NC_010634:4001154:400660540066054007012408Yersinia pseudotuberculosis PB1/+, complete genomefilamentation induced by cAMP protein Fic2e-0962.4
NC_015222:3137167:314575531457553146360606Nitrosomonas sp. AL212 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-0962
NC_007519:2847816:285367428536742854279606Desulfovibrio alaskensis G20 chromosome, complete genomemobilization/cell filamentation protein-like protein2e-0962
NC_006155:4062000:406639940663994066818420Yersinia pseudotuberculosis IP 32953, complete genome2e-0962
NC_020301:1449616:1465240146524014664121173Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeBep protein7e-0960.5
NC_015311:2059879:210041321004132101306894Prevotella denticola F0289 chromosome, complete genomeFic family protein7e-0960.5
NC_015571:1207000:121598112159811216874894Porphyromonas gingivalis TDC60, complete genomecell filamentation protein (fic)1e-0859.3
NC_015697:33665:539615396154521561Lactobacillus reuteri SD2112 chromosome, complete genomefic protein2e-0858.9
NC_010814:2275199:228705222870522287657606Geobacter lovleyi SZ, complete genomefilamentation induced by cAMP protein Fic2e-0858.9
NC_009513:1065704:108357810835781084138561Lactobacillus reuteri F275, complete genomefilamentation induced by cAMP protein Fic2e-0858.5
NC_007633:408000:411606411606412175570Mycoplasma capricolum subsp. capricolum ATCC 27343, completeFic protein family3e-0858.2
NC_014500:894136:924557924557925132576Dickeya dadantii 3937 chromosome, complete genomecell filamentation protein Fic4e-0857.8
NC_014655:130636:156583156583157191609Leadbetterella byssophila DSM 17132 chromosome, complete genomefilamentation induced by camp protein fic4e-0857.8
NC_011060:1288862:130702113070211307902882Pelodictyon phaeoclathratiforme BU-1, complete genomefilamentation induced by cAMP protein Fic7e-0857
NC_019902:1:698169817598618Thioalkalivibrio nitratireducens DSM 14787, complete genomeFic family putative cell filamentation protein1e-0756.2
NC_009381:460358:476247476247476621375Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-0652.8
NC_008150:3495851:350074535007453501119375Yersinia pestis Antiqua, complete genomehypothetical protein1e-0652.8
NC_008149:587689:603851603851604225375Yersinia pestis Nepal516, complete genomehypothetical protein1e-0652.8
NC_017265:3790750:379320637932063793517312Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-0651.2
NC_004088:3923804:392784439278443928155312Yersinia pestis KIM, complete genomehypothetical protein4e-0651.2