Pre_GI: BLASTP Hits

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Query: NC_012917:3565268:3590575 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3590575, End: 3591234, Length: 660

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:4598217:459971045997104600369660Serratia marcescens WW4, complete genomephage terminase, endonuclease subunit5e-75280
NC_013282:3389619:339111733911173391863747Cronobacter turicensis, complete genomeTerminase, endonuclease subunit7e-63239
NC_016818:1605918:162468116246811625430750Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePhage small terminase subunit9e-63239
NC_017047:1551836:157143315714331572179747Rahnella aquatilis HX2 chromosome, complete genomegpM1e-62239
NC_017047:4037674:405779340577934058449657Rahnella aquatilis HX2 chromosome, complete genomesmall terminase subunit6e-60230
NC_014562:1698253:171339117133911713963573Pantoea vagans C9-1 chromosome, complete genomeTerminase, endonuclease subunit (GpM)8e-60229
NC_009648:3803622:382105738210573821776720Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage small terminase subunit5e-59227
NC_015061:1598920:162083216208321621488657Rahnella sp. Y9602 chromosome, complete genomesmall terminase subunit3e-54211
NC_016845:1773416:178959617895961790246651Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,terminase, endonuclease subunit3e-47187
NC_011205:2938356:293891629389162939566651Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853terminase, endonuclease subunit3e-47187
NC_007613:761234:777260777260777910651Shigella boydii Sb227, complete genometerminase, endonuclease subunit2e-46185
NC_007963:1582089:158403715840371584702666Chromohalobacter salexigens DSM 3043, complete genomephage small terminase subunit4e-45181
NC_020260:312805:333316333316333969654Cronobacter sakazakii Sp291, complete genomesmall terminase subunit3e-45181
NC_012962:4942000:495176449517644952429666Photorhabdus asymbiotica, complete genomephage r protein [enterobacteria phage 186] gb|aac34151.1| (u32222)2e-44178
NC_014837:3766426:376843037684303769080651Pantoea sp. At-9b chromosome, complete genomesmall terminase subunit3e-44178
NC_014306:1244721:126190612619061262556651Erwinia billingiae Eb661, complete genomeTerminase, endonuclease subunit3e-43175
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-43174
NC_006511:2677964:267872526787252679375651Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage terminase2e-42172
NC_003198:4453457:449049044904904491140651Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative phage terminase2e-42172
NC_020209:3262000:327820232782023278921720Pseudomonas poae RE*1-1-14, complete genomephage P2 small terminase subunit gpM-like protein5e-42171
NC_011149:2802199:280366928036692804319651Salmonella enterica subsp. enterica serovar Agona str. SL483,terminase, endonuclease subunit7e-42170
NC_016857:2871689:287168928716892872342654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74terminase-like protein4e-41167
NC_016810:2871689:287168928716892872342654Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage terminase4e-41167
NC_010694:614985:641390641390642031642Erwinia tasmaniensis, complete genomePutative phage terminase2e-39162
NC_014228:3022903:304301130430113043673663Xenorhabdus nematophila ATCC 19061, complete genomeTerminase, endonuclease subunit (GpM)3e-39161
NC_003902:3514000:353387035338703534589720Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related terminase4e-39161
NC_013956:3525711:352629435262943526938645Pantoea ananatis LMG 20103 chromosome, complete genomeM9e-39160
NC_015856:1152021:117044811704481171164717Collimonas fungivorans Ter331 chromosome, complete genomephage small terminase subunit3e-38158
NC_012724:147454:148594148594149283690Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein8e-37153
NC_014323:992978:992978992978993697720Herbaspirillum seropedicae SmR1 chromosome, complete genomebacteriophage-related terminase3e-36151
NC_016514:2334870:233547623354762336027552Enterobacter cloacae EcWSU1 chromosome, complete genomeSmall Terminase Subunit9e-35146
NC_017046:2869873:287043128704312870982552Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage terminase5e-34144
NC_017059:3688688:369236436923643693062699Rhodospirillum photometricum DSM 122, complete genomeSmall terminase subunit (Endonuclease subunit of bacteriophage terminase)1e-32139
NC_012724:1892000:190773519077351908433699Burkholderia glumae BGR1 chromosome 1, complete genomeGp1, phage terminase, endonuclease subunit2e-32139
NC_008800:1870596:187059618705961871306711Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,phage terminase/endonuclease subunit7e-31133
NC_014306:103545:123350123350124300951Erwinia billingiae Eb661, complete genomePhage terminase/endonuclease subunit8e-29127
NC_008751:3214000:321405432140543214788735Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage small terminase subunit3e-1375.1
NC_008751:1762562:176256217625621763296735Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage small terminase subunit1e-1273.2
NC_005773:5636606:563760656376065638328723Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-1168.6
NC_011883:269497:290599290599291348750Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,small terminase subunit1e-1066.6
NC_013892:992811:100054610005461001253708Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-0963.2
NC_009656:5185704:520403752040375204774738Pseudomonas aeruginosa PA7 chromosome, complete genomeputative terminase, endonuclease subunit2e-0962.4
NC_012125:894955:931719931719932420702Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-0858.9
NC_009348:4135002:413678341367834137511729Aeromonas salmonicida subsp. salmonicida A449, complete genomephage terminase subunit3e-0858.9
NC_014500:894136:931449931449932150702Dickeya dadantii 3937 chromosome, complete genomeputative terminase, endonuclease subunit1e-0653.1
NC_013592:804288:832149832149832850702Dickeya dadantii Ech586, complete genomesmall terminase subunit1e-0653.1