Pre_GI: BLASTP Hits

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Query: NC_012917:3565268:3586633 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3586633, End: 3588402, Length: 1770

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:4598217:4602548460254846043561809Serratia marcescens WW4, complete genomephage terminase, ATPase subunit01030
NC_014562:1698253:1711168171116817129311764Pantoea vagans C9-1 chromosome, complete genomeTerminase, ATPase subunit (GpP)01011
NC_017047:1551836:1567506156750615692751770Rahnella aquatilis HX2 chromosome, complete genomephage terminase subunit GpP0986
NC_013282:3389619:3393852339385233956241773Cronobacter turicensis, complete genomeTerminase, ATPase subunit0926
NC_016514:2334870:2336377233637723381461770Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein0904
NC_011353:2825500:2826559282655928283311773Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage large terminase subunit GpP0903
NC_013008:2824511:2825539282553928273111773Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage large terminase subunit GpP0903
NC_015061:596247:6213146213146231041791Rahnella sp. Y9602 chromosome, complete genometerminase, ATPase subunit0903
NC_017047:4037674:4053906405390640556721767Rahnella aquatilis HX2 chromosome, complete genometerminase, ATPase subunit0902
NC_016845:4046142:4062801406280140645701770Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative prophage large terminase protein0893
NC_015061:1598920:1616945161694516187111767Rahnella sp. Y9602 chromosome, complete genometerminase, ATPase subunit0893
NC_009648:3803622:3823956382395638257251770Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage large terminase protein0889
NC_011205:2938356:2941621294162129433871767Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853terminase, ATPase subunit0859
NC_011601:846358:8660998660998678651767Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometerminase, ATPase subunit0856
NC_016845:1773416:1785775178577517875411767Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,terminase, ATPase subunit0856
NC_012947:2898179:2899639289963929014051767Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein0854
NC_011149:2802199:2806377280637728081431767Salmonella enterica subsp. enterica serovar Agona str. SL483,terminase, ATPase subunit0854
NC_007613:761234:7734397734397752051767Shigella boydii Sb227, complete genometerminase, ATPase subunit0853
NC_016810:2871689:2874421287442128761871767Salmonella enterica subsp. enterica serovar Typhimurium strterminase subunit0851
NC_016857:2871689:2874421287442128761871767Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74terminase-like protein0851
NC_017046:2869873:2873163287316328749291767Salmonella enterica subsp. enterica serovar Typhimurium str. 798terminase subunit0851
NC_003198:4453457:4493201449320144949671767Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable terminase subunit0850
NC_011147:2676972:2676972267697226787381767Salmonella enterica subsp. enterica serovar Paratyphi A strterminase subunit0845
NC_006511:2677964:2681436268143626832021767Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCprobable terminase subunit0845
NC_012962:4942000:4954531495453149562881758Photorhabdus asymbiotica, complete genomeprobable phage terminase subunit0843
NC_014306:1244721:1258060125806012598261767Erwinia billingiae Eb661, complete genomeTerminase, ATPase subunit0837
NC_020260:312805:3294083294083311201713Cronobacter sakazakii Sp291, complete genometerminase-like protein0833
NC_014837:3766426:3771175377117537729411767Pantoea sp. At-9b chromosome, complete genomehypothetical protein0832
NC_013956:3525711:3529170352917035309361767Pantoea ananatis LMG 20103 chromosome, complete genomeP0830
NC_020418:3022891:3046502304650230482201719Morganella morganii subsp. morganii KT, complete genometerminase, ATPase subunit0827
NC_010694:614985:6373996373996391651767Erwinia tasmaniensis, complete genomeTerminase, ATPase subunit0823
NC_015424:2726223:2769201276920127709671767Aeromonas veronii B565 chromosome, complete genomephage-related terminase0783
NC_015856:1152021:1166607116660711684301824Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein0728
NC_012660:1737423:1741734174173417434911758Pseudomonas fluorescens SBW25 chromosome, complete genometerminase ATPase subunit0705
NC_020209:3262000:3274349327434932761061758Pseudomonas poae RE*1-1-14, complete genometerminase ATPase subunit0704
NC_003902:3514000:3530053353005335318371785Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related terminase0700
NC_012724:147454:1512861512861530551770Burkholderia glumae BGR1 chromosome 1, complete genomePhage terminase, ATPase subunit0700
NC_010943:325739:3277713277713295641794Stenotrophomonas maltophilia K279a, complete genomeputative phage terminase, ATPase subunit (gpp)0696
NC_014323:992978:9957769957769975571782Herbaspirillum seropedicae SmR1 chromosome, complete genomeDNA-dependent ATPase terminase subunit0687
NC_007963:1582089:1586706158670615884901785Chromohalobacter salexigens DSM 3043, complete genomeprotein of unknown function DUF2640677
NC_003295:2111730:2112711211271121142311521Ralstonia solanacearum GMI1000, complete genomePROBABLE TERMINASE (ATPASE SUBUNIT) RELATED PROTEIN0655
NC_017059:3688688:3688688368868836905711884Rhodospirillum photometricum DSM 122, complete genomehypothetical protein8e-173607
NC_012724:1892000:1903798190379819056151818Burkholderia glumae BGR1 chromosome 1, complete genomePhage terminase ATPase subunit1e-167590
NC_008800:1870596:1873426187342618751441719Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,terminase, ATPase subunit4e-151535
NC_020181:5182568:518554251855425186501960Enterobacter aerogenes EA1509E, complete genomePhage terminase, ATPase subunit4e-144511
NC_007645:6858465:6879150687915068808951746Hahella chejuensis KCTC 2396, complete genomeMu-like prophage FluMu protein gp287e-139494
NC_014306:103545:1195251195251210631539Erwinia billingiae Eb661, complete genomeProbable terminase, ATPase subunit1e-136487
NC_009656:5185704:5199859519985952019072049Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein5e-135481
NC_008750:3314309:3327261332726133290691809Shewanella sp. W3-18-1, complete genomeprotein of unknown function DUF2641e-126454
NC_008228:776000:7926317926317943641734Pseudoalteromonas atlantica T6c, complete genomeprotein of unknown function DUF2642e-125450
NC_013592:804288:8282918282918300661776Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF2642e-123442
NC_014500:894136:9275919275919293661776Dickeya dadantii 3937 chromosome, complete genomehypothetical protein6e-123441
NC_015061:2770856:2771836277183627736231788Rahnella sp. Y9602 chromosome, complete genomehypothetical protein7e-122438
NC_012125:894955:9278929278929296671776Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-121436
NC_011147:2713937:2712165271216527139401776Salmonella enterica subsp. enterica serovar Paratyphi A strphage protein8e-121434
NC_006511:2718401:2716629271662927184041776Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene8e-121434
NC_013892:992811:9966789966789984621785Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-118427
NC_008751:1762562:1765341176534117671401800Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein of unknown function DUF2644e-118425
NC_008751:3214000:3216821321682132186201800Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein of unknown function DUF2649e-118424
NC_012779:2127542:2163503216350321653081806Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-114411
NC_020181:5182568:518473251847325185532801Enterobacter aerogenes EA1509E, complete genomePhage terminase, ATPase subunit9e-114410
NC_009348:4135002:4139627413962741414471821Aeromonas salmonicida subsp. salmonicida A449, complete genomephage terminase ATPase subunit1e-109397
NC_011883:269497:2867412867412885881848Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,protein of unknown function DUF2641e-104380
NC_009436:1466580:148706614870661487830765Enterobacter sp. 638, complete genomehypothetical protein2e-100367
NC_013446:2761000:277540427754042776372969Comamonas testosteroni CNB-2, complete genomehypothetical protein6e-91335
NC_014562:2871765:288015828801582880730573Pantoea vagans C9-1 chromosome, complete genomeTerminase, ATPase subunit (GpP)4e-66253
NC_006155:2116834:211607321160732116837765Yersinia pseudotuberculosis IP 32953, complete genomeputative W protein [Enterobacteria phage 186] gb|AAC34147.1|...2e-34147
NC_005773:5636606:563946056394605639822363Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH06, terminase, ATPase subunit, domain protein1e-30134
NC_003295:2111730:211422221142222114491270Ralstonia solanacearum GMI1000, complete genomePROBABLE TERMINASE (ATPASE SUBUNIT) RELATED PROTEIN2e-20101
NC_014837:2458780:247932824793282479542215Pantoea sp. At-9b chromosome, complete genome1e-1895.1
NC_016816:2073677:208081020808102080983174Pantoea ananatis LMG 5342, complete genometerminase, ATPase subunit2e-1688.2