Pre_GI: BLASTP Hits

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Query: NC_012917:3565268:3585617 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3585617, End: 3586636, Length: 1020

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:4598217:4604356460435646053901035Serratia marcescens WW4, complete genomephage-related capsid packaging protein8e-159559
NC_014562:1698253:1710134171013417111681035Pantoea vagans C9-1 chromosome, complete genomePresumed portal vertex protein (GpQ)2e-156552
NC_020211:3151458:315834731583473159315969Serratia marcescens WW4, complete genomephage portal protein, PBSX family4e-156551
NC_006155:2116834:2116834211683421178711038Yersinia pseudotuberculosis IP 32953, complete genomecapsid portal protein [Enterobacteria phage 186] gb|AAC...8e-156550
NC_014837:2458780:2478225247822524792651041Pantoea sp. At-9b chromosome, complete genomephage portal protein, PBSX family1e-153542
NC_016514:2334870:2338148233814823391701023Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein2e-152538
NC_013282:3389619:3395537339553733966401104Cronobacter turicensis, complete genomePresumed portal vertex protein5e-152537
NC_009648:3803622:3825725382572538267681044Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage presumed portal protein3e-150531
NC_017047:4037674:4052873405287340539041032Rahnella aquatilis HX2 chromosome, complete genomephage portal protein, PBSX family4e-150530
NC_020181:5182568:5186504518650451875501047Enterobacter aerogenes EA1509E, complete genomePhage-related capsid packaging protein5e-150530
NC_016845:4046142:4061758406175840628011044Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative prophage presumed portal protein2e-149528
NC_015061:1598920:1615911161591116169421032Rahnella sp. Y9602 chromosome, complete genomephage portal protein, PBSX family2e-149528
NC_016818:1605918:1619740161974016207531014Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completephage portal protein, PBSX family2e-148525
NC_013008:2824511:2827311282731128283451035Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage capsid protein8e-148523
NC_011353:2825500:2828331282833128293651035Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage portal protein, pbsx family8e-148523
NC_017047:1551836:1566491156649115675041014Rahnella aquatilis HX2 chromosome, complete genomephage portal protein, PBSX family1e-146519
NC_015061:596247:6202816202816213121032Rahnella sp. Y9602 chromosome, complete genomephage portal protein, PBSX family9e-146516
NC_016816:2073677:2080983208098320820051023Pantoea ananatis LMG 5342, complete genomePbsX family phage portal protein8e-141499
NC_016810:2871689:2876187287618728772181032Salmonella enterica subsp. enterica serovar Typhimurium strcapsid portal protein3e-135481
NC_016857:2871689:2876187287618728772181032Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage portal protein, pbsx family3e-135481
NC_017046:2869873:2874929287492928759601032Salmonella enterica subsp. enterica serovar Typhimurium str. 798capsid portal protein3e-135481
NC_011149:2802199:2808143280814328091711029Salmonella enterica subsp. enterica serovar Agona str. SL483,phage portal protein, pbsx family2e-135481
NC_009436:1466580:1486035148603514870661032Enterobacter sp. 638, complete genomePBSX family phage portal protein6e-135480
NC_014837:3766426:3772942377294237739731032Pantoea sp. At-9b chromosome, complete genomephage portal protein, PBSX family8e-135480
NC_014306:1244721:1257023125702312580601038Erwinia billingiae Eb661, complete genomePhage portal protein3e-134478
NC_010694:614985:6363446363446373991056Erwinia tasmaniensis, complete genomeProbable capsid portal protein2e-132472
NC_011601:846358:8650748650748660991026Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomecapsid portal protein5e-132471
NC_013956:3525711:3530936353093635319851050Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein3e-132471
NC_003198:4453457:4494964449496444960101047Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable capsid portal protein9e-132469
NC_014562:2871765:2880730288073028817611032Pantoea vagans C9-1 chromosome, complete genomehypothetical protein2e-131469
NC_016845:1773416:1784750178475017857751026Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative phage portal protein3e-131468
NC_020418:3022891:3045483304548330465021020Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-130466
NC_012947:2898179:2901405290140529024301026Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephage portal protein, PBSX family1e-130466
NC_011205:2938356:2943387294338729444181032Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage portal protein, pbsx family1e-130466
NC_011147:2676972:2678738267873826797811044Salmonella enterica subsp. enterica serovar Paratyphi A strcapsid portal protein4e-130464
NC_006511:2677964:2683202268320226842451044Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCprobable capsid portal protein4e-130464
NC_020260:312805:3283593283593294081050Cronobacter sakazakii Sp291, complete genomephage portal protein, pbsx family9e-129459
NC_003295:2111730:2114488211448821155731086Ralstonia solanacearum GMI1000, complete genomePROBABLE BACTERIOPHAGE PROTEIN9e-129459
NC_012962:4942000:495635849563584957341984Photorhabdus asymbiotica, complete genomeprobable capsid portal protein2e-121435
NC_012724:147454:1530521530521541071056Burkholderia glumae BGR1 chromosome 1, complete genomeGp5, phage portal protein, pbsx family protein4e-118424
NC_014323:992978:9975579975579986091053Herbaspirillum seropedicae SmR1 chromosome, complete genomebacteriophage capsid portal protein protein2e-115415
NC_015856:1152021:1165543116554311666881146Collimonas fungivorans Ter331 chromosome, complete genomephage portal protein, pBSX family3e-111401
NC_008800:1870596:1875147187514718761871041Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative portal vertex protein6e-110397
NC_012660:1737423:1743491174349117445431053Pseudomonas fluorescens SBW25 chromosome, complete genomepresumed portal vertex protein2e-109395
NC_014306:103545:1184511184511195211071Erwinia billingiae Eb661, complete genomePutative portal vertex protein3e-109395
NC_007963:1582089:1588487158848715895571071Chromohalobacter salexigens DSM 3043, complete genomePhage portal protein, PBSX7e-109394
NC_020209:3262000:3273297327329732743491053Pseudomonas poae RE*1-1-14, complete genomepresumed portal vertex protein2e-108392
NC_012967:2105251:211144021114402112390951Escherichia coli B str. REL606 chromosome, complete genomebacteriophage capsid portal protein4e-106384
NC_015424:2726223:2768197276819727692011005Aeromonas veronii B565 chromosome, complete genomePortal vertex-like protein1e-105383
NC_003902:3514000:3529022352902235300531032Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related capsid packaging protein5e-105381
NC_012724:1892000:1902743190274319037981056Burkholderia glumae BGR1 chromosome 1, complete genomeProbable portal protein4e-104378
NC_010943:325739:3295643295643305741011Stenotrophomonas maltophilia K279a, complete genomeputative presumed portal vertex protein (gpq)4e-95348
NC_013850:3303500:331201233120123313010999Klebsiella variicola At-22 chromosome, complete genomephage portal protein, PBSX family4e-89328
NC_017986:2985514:299498129949812995829849Pseudomonas putida ND6 chromosome, complete genomepresumed portal vertex protein2e-80299
NC_009801:995396:100954210095421010084543Escherichia coli E24377A, complete genomephage portal protein, PBSX family2e-78293
NC_007645:6858465:687814368781436879135993Hahella chejuensis KCTC 2396, complete genomephage portal protein, PBSX family1e-74280
NC_013446:2761000:277459827745982775407810Comamonas testosteroni CNB-2, complete genomephage portal protein, PBSX family1e-71270
NC_008751:3214000:3218631321863132196741044Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage portal protein, PBSX family3e-69262
NC_008751:1762562:1767151176715117681941044Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage portal protein, PBSX family6e-69261
NC_007613:761234:772843772843773439597Shigella boydii Sb227, complete genomeprobable capsid portal protein (fragment)4e-68258
NC_012724:359444:387562387562388095534Burkholderia glumae BGR1 chromosome 1, complete genome4e-65248
NC_011883:269497:2856962856962867301035Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,phage portal protein, PBSX family1e-63243
NC_008228:776000:7916147916147926301017Pseudoalteromonas atlantica T6c, complete genomephage portal protein, PBSX family7e-63241
NC_017047:3174588:319145731914573191909453Rahnella aquatilis HX2 chromosome, complete genomeportal vertex protein GpQ4e-62238
NC_015061:3111211:312685531268553127283429Rahnella sp. Y9602 chromosome, complete genome1e-61236
NC_009348:4135002:4141444414144441424601017Aeromonas salmonicida subsp. salmonicida A449, complete genomephage capsid portal protein2e-56219
NC_013892:992811:9956509956509966781029Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-50200
NC_012779:2127542:2162473216247321635281056Edwardsiella ictaluri 93-146, complete genomephage portal protein, pbsx family, putative5e-49194
NC_014500:894136:9265669265669276151050Dickeya dadantii 3937 chromosome, complete genomeputative portal protein3e-48192
NC_013592:804288:8272668272668282941029Dickeya dadantii Ech586, complete genomephage portal protein, PBSX family3e-48192
NC_012125:894955:9268349268349278951062Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-48191
NC_006511:2718401:2718401271840127194621062Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene4e-48191
NC_011147:2713937:2713937271393727149981062Salmonella enterica subsp. enterica serovar Paratyphi A strphage protein4e-48191
NC_009656:5185704:519909351990935199800708Pseudomonas aeruginosa PA7 chromosome, complete genomePBSX family phage portal protein2e-47189
NC_007712:433500:449077449077450075999Sodalis glossinidius str. 'morsitans', complete genomeputative phage capsid portal protein8e-47187
NC_015061:2770856:2773620277362027746511032Rahnella sp. Y9602 chromosome, complete genomephage portal protein, PBSX family2e-43176
NC_008750:3314309:3329051332905133300971047Shewanella sp. W3-18-1, complete genomephage portal protein, PBSX family2e-42173
NC_007613:761234:772408772408772752345Shigella boydii Sb227, complete genomeprobable capsid portal protein (fragment)2e-41170
NC_010634:2810815:282262228226222823095474Yersinia pseudotuberculosis PB1/+, complete genomeputative capsid portal protein1e-38160
NC_006155:2893802:290561029056102906083474Yersinia pseudotuberculosis IP 32953, complete genomeputative capsid portal protein [Enterobacteria phage 18...1e-38160
NC_016835:128757:134122134122134526405Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,2e-31136
NC_014722:1971305:197130519713051971577273Burkholderia rhizoxinica HKI 454, complete genomePresumed portal vertex protein6e-23108
NC_017047:3174588:319001331900133190297285Rahnella aquatilis HX2 chromosome, complete genomecapsid portal protein2e-22106
NC_015061:3111211:312547131254713125665195Rahnella sp. Y9602 chromosome, complete genome1e-21104
NC_015424:2462522:247987924798792480298420Aeromonas veronii B565 chromosome, complete genomephage capsid portal protein1e-1584.3