Pre_GI: BLASTP Hits

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Query: NC_012917:3565268:3580433 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3580433, End: 3582736, Length: 2304

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015061:1598920:1606607160660716088892283Rahnella sp. Y9602 chromosome, complete genomereplication protein A0895
NC_016818:1605918:1613573161357316158702298Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeBacteriophage replication gene A protein (GPA)0853
NC_017047:1551836:1559523155952315618322310Rahnella aquatilis HX2 chromosome, complete genomereplication protein A0847
NC_009801:995396:1004301100430110065772277Escherichia coli E24377A, complete genomereplication gene A protein0845
NC_015061:596247:6145476145476167902244Rahnella sp. Y9602 chromosome, complete genomereplication protein A0843
NC_016514:2334870:2342361234236123446912331Enterobacter cloacae EcWSU1 chromosome, complete genomereplication endonuclease from prophage-like region0838
NC_006155:2116834:2119005211900521212872283Yersinia pseudotuberculosis IP 32953, complete genomeputative phage P2 replication protein0836
NC_020211:4598217:4609161460916146113772217Serratia marcescens WW4, complete genomephage replication protein0836
NC_012967:2105251:2116486211648621187772292Escherichia coli B str. REL606 chromosome, complete genomeReplication gene A protein0806
NC_011353:2825500:2833462283346228357442283Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage replication gene A protein0803
NC_013008:2824511:2832442283244228347242283Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage replication initiation protein0803
NC_017047:4037674:4048153404815340503212169Rahnella aquatilis HX2 chromosome, complete genomereplication protein A0800
NC_020418:3022891:3039850303985030421622313Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-148527
NC_020211:3151458:3162955316295531641181164Serratia marcescens WW4, complete genomephage replication protein6e-126452
NC_008800:1870596:1882132188213218844202289Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,phage replication protein4e-87323
NC_014306:103545:1118481118481140972250Erwinia billingiae Eb661, complete genomePhage replication protein2e-84314
NC_013956:3525711:3537067353706735393612295Pantoea ananatis LMG 20103 chromosome, complete genomeA4e-84313
NC_015061:2770856:2775254277525427774102157Rahnella sp. Y9602 chromosome, complete genomereplication protein A1e-83311
NC_006155:2208686:2208686220868622112412556Yersinia pseudotuberculosis IP 32953, complete genomeputative phage replication protein2e-83310
NC_016835:128757:138654138654139565912Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,8e-83308
NC_014306:1244721:1253164125316412554252262Erwinia billingiae Eb661, complete genomeBacteriophage replication gene A1e-81305
NC_013592:804288:8242108242108262552046Dickeya dadantii Ech586, complete genomereplication protein A2e-81304
NC_014500:894136:9221489221489241902043Dickeya dadantii 3937 chromosome, complete genomeReplication gene A protein2e-81303
NC_014837:3766426:3777765377776537797742010Pantoea sp. At-9b chromosome, complete genomereplication protein A4e-81303
NC_010634:2124185:2124185212418521267402556Yersinia pseudotuberculosis PB1/+, complete genomereplication gene A6e-81302
NC_009436:3807420:3807420380742038096422223Enterobacter sp. 638, complete genomebacteriophage replication gene A3e-80300
NC_020181:5182568:5190399519039951925192121Enterobacter aerogenes EA1509E, complete genomePhage replication protein2e-76288
NC_012125:894955:9241889241889262092022Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-76286
NC_011080:2870428:2871002287100228730232022Salmonella enterica subsp. enterica serovar Newport str. SL254,replication gene A protein5e-76286
NC_016845:4046142:4055149405514940572122064Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,gp366e-76286
NC_013892:992811:9928119928119950332223Xenorhabdus bovienii SS-2004 chromosome, complete genomereplication gene A protein (GpA)7e-75282
NC_013282:3389619:3399976339997634019341959Cronobacter turicensis, complete genomeReplication gene A protein7e-73275
NC_009648:3803622:3829192382919238310121821Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage protein3e-71270
NC_011147:2713937:2715623271562327171551533Salmonella enterica subsp. enterica serovar Paratyphi A strphage protein9e-71268
NC_006511:2718401:2720087272008727216191533Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene9e-71268
NC_007613:761234:7664947664947689082415Shigella boydii Sb227, complete genomepossible endonuclease2e-64248
NC_011742:2823000:2824202282420228262892088Escherichia coli S88 chromosome, complete genomebacteriophage replication gene A protein (endonuclease)2e-63244
NC_011205:2938356:2948481294848129508772397Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage replication gene A7e-62239
NC_016860:2896254:2893834289383428962632430Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-61237
NC_003197:2870268:2870268287026828726972430Salmonella typhimurium LT2, complete genomehypothetical protein3e-61237
NC_009436:1466580:1481090148109014835012412Enterobacter sp. 638, complete genomebacteriophage replication gene A3e-60234
NC_011601:846358:8594528594528618662415Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomereplication protein7e-60232
NC_020260:312805:3232483232483256562409Cronobacter sakazakii Sp291, complete genomebacteriophage replication protein A3e-59230
NC_011147:2676972:2683595268359526859972403Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-59229
NC_006511:2677964:2688059268805926904612403Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-59229
NC_013850:3303500:3315653331565333182532601Klebsiella variicola At-22 chromosome, complete genomereplication protein A9e-59229
NC_017046:2869873:2880139288013928823762238Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein2e-58228
NC_016810:2871689:2881397288139728836402244Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein2e-58228
NC_016857:2871689:2881397288139728836402244Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative replication endonuclease from prophage-like region2e-58228
NC_003198:4453457:4499824449982445022382415Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-58227
NC_011149:2802199:2813448281344828156852238Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-58227
NC_010694:614985:6321366321366345502415Erwinia tasmaniensis, complete genomePutative replication protein for prophage2e-57224
NC_012962:4942000:496033549603354961183849Photorhabdus asymbiotica, complete genomeputative phage replication protein5e-57223
NC_012779:2127542:2157084215708421596902607Edwardsiella ictaluri 93-146, complete genomereplication protein A9e-55215
NC_016628:373815:3889143889143915442631Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage protein1e-50202
NC_016745:1892500:1894077189407718963592283Oceanimonas sp. GK1 chromosome, complete genomebacteriophage replication protein A4e-50200
NC_012912:1053618:1064104106410410657561653Dickeya zeae Ech1591, complete genomereplication gene A protein7e-50199
NC_008228:776000:7855287855287882092682Pseudoalteromonas atlantica T6c, complete genomebacteriophage replication gene A2e-47191
NC_009348:1663870:1663870166387016661432274Aeromonas salmonicida subsp. salmonicida A449, complete genomephage replication initiation protein A5e-46186
NC_009348:4135002:4148999414899941512782280Aeromonas salmonicida subsp. salmonicida A449, complete genomephage protein2e-45184
NC_014323:2680085:2693590269359026953681779Herbaspirillum seropedicae SmR1 chromosome, complete genomebacteriophage replication protein3e-43177
NC_015424:2726223:2759789275978927620292241Aeromonas veronii B565 chromosome, complete genomephage protein2e-43177
NC_015731:2460248:2478827247882724805211695Nitrosomonas sp. Is79A3 chromosome, complete genomereplication gene A2e-42174
NC_015731:2811579:2815161281516128168731713Nitrosomonas sp. Is79A3 chromosome, complete genomereplication gene A4e-42173
NC_008750:3314309:3332204333220433344412238Shewanella sp. W3-18-1, complete genomebacteriophage replication gene A6e-42172
NC_009784:253852:2686252686252705111887Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein1e-41172
NC_018678:87064:9049690496921391644Alteromonas macleodii str. 'English Channel 673' chromosome,replication protein A4e-41170
NC_013456:1843000:1846904184690418484481545Vibrio sp. Ex25 chromosome 1, complete genomeputative replication protein3e-41170
NC_004459:2443000:2503609250360925051441536Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative replication protein6e-41169
NC_005139:1784000:1819943181994318214871545Vibrio vulnificus YJ016 chromosome I, complete sequenceA protein7e-41169
NC_009438:3019552:3027173302717330290951923Shewanella putrefaciens CN-32 chromosome, complete genomebacteriophage replication gene A1e-40168
NC_015563:4959843:4974617497461749766592043Delftia sp. Cs1-4 chromosome, complete genomereplication protein A1e-38162
NC_014562:2871765:2885067288506728863921326Pantoea vagans C9-1 chromosome, complete genomeProbable replication endonuclease from prophage- like region9e-39162
NC_012724:1892000:1894988189498818968951908Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein4e-37157
NC_012917:2362725:2380769238076923825771809Pectobacterium carotovorum subsp. carotovorum PC1, complete genomereplication protein A1e-31138
NC_012559:854507:8705088705088722741767Laribacter hongkongensis HLHK9, complete genomePutative phage replication protein8e-31135
NC_014323:961825:9718439718439738942052Herbaspirillum seropedicae SmR1 chromosome, complete genomebacteriophage replication A protein2e-30134
NC_012947:2898179:2906082290608229075271446Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeregulatory CII family protein1e-27125
NC_015633:1702000:1714303171430317161021800Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein1e-0965.5
NC_012962:4942000:495968149596814960262582Photorhabdus asymbiotica, complete genomeputative phage replication protein1e-0862.4
NC_016818:3986570:399398739939873994277291Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, complete2e-0862