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Query: NC_012917:3565268:3579378 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3579378, End: 3579626, Length: 249

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017047:1551836:155877415587741559016243Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-1685.5
NC_016818:1605918:161282416128241613066243Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-1684.7
NC_015061:1598920:160585816058581606100243Rahnella sp. Y9602 chromosome, complete genomehypothetical protein7e-1682.4
NC_009801:995396:100325610032561003513258Escherichia coli E24377A, complete genomehypothetical protein2e-0961.6
NC_012125:894955:923110923110923340231Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-0960.1
NC_011080:2870428:287416328741632874393231Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-0857.8
NC_013592:804288:823660823660823890231Dickeya dadantii Ech586, complete genomehypothetical protein8e-0649.3