Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:3565268:3579378 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3579378, End: 3579626, Length: 249

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017047:1551836:155877415587741559016243Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-1685.5
NC_016818:1605918:161282416128241613066243Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-1684.7
NC_015061:1598920:160585816058581606100243Rahnella sp. Y9602 chromosome, complete genomehypothetical protein7e-1682.4
NC_009801:995396:100325610032561003513258Escherichia coli E24377A, complete genomehypothetical protein2e-0961.6
NC_012125:894955:923110923110923340231Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-0960.1
NC_011080:2870428:287416328741632874393231Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-0857.8
NC_013592:804288:823660823660823890231Dickeya dadantii Ech586, complete genomehypothetical protein8e-0649.3