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Query: NC_012917:3565268:3578815 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3578815, End: 3579315, Length: 501

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009801:995396:100272510027251003225501Escherichia coli E24377A, complete genomeputative replication gene B protein1e-55215
NC_013008:2824511:283580028358002836300501Escherichia coli O157:H7 str. TW14359 chromosome, complete genomereplication gene B protein9e-55212
NC_011353:2825500:283682028368202837320501Escherichia coli O157:H7 str. EC4115 chromosome, complete genomereplication gene B protein9e-55212
NC_012967:2105251:211984421198442120335492Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein6e-54209
NC_017047:1551836:155821415582141558714501Rahnella aquatilis HX2 chromosome, complete genomereplication protein B protein (GpB)1e-51201
NC_015061:1598920:160529816052981605798501Rahnella sp. Y9602 chromosome, complete genomereplication protein B protein (GpB)1e-51201
NC_016818:1605918:161226416122641612764501Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein5e-51199
NC_016514:2334870:234522223452222345728507Enterobacter cloacae EcWSU1 chromosome, complete genomereplication B protein9e-50195