Pre_GI: BLASTP Hits

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Query: NC_012917:3565268:3577329 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3577329, End: 3577838, Length: 510

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:894136:920427920427920936510Dickeya dadantii 3937 chromosome, complete genomeRegulatory protein CII1e-64244
NC_013592:804288:822485822485822994510Dickeya dadantii Ech586, complete genomeregulatory CII family protein2e-64244
NC_009648:3803622:383244238324423832951510Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage protein for establishment of lysogeny6e-52202
NC_014306:1244721:125003212500321250541510Erwinia billingiae Eb661, complete genomePhage regulatory CII family protein6e-51199
NC_009436:3807420:381195838119583812467510Enterobacter sp. 638, complete genomephage regulatory CII family protein6e-50196
NC_020211:4598217:461323446132344613743510Serratia marcescens WW4, complete genomephage regulatory CII family protein4e-49193
NC_014837:2458780:247114224711422471651510Pantoea sp. At-9b chromosome, complete genomeregulatory CII family protein7e-49192
NC_011601:846358:857051857051857560510Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulatory protein5e-48189
NC_016810:2871689:288595328859532886462510Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage regulatory protein2e-47188
NC_016857:2871689:288595328859532886462510Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage regulatory protein2e-47188
NC_017046:2869873:288469528846952885204510Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage regulatory protein2e-47188
NC_006511:2677964:269293126929312693440510Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage regulatory protein4e-47187
NC_003198:4453457:450470845047084505217510Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage regulatory protein4e-47187
NC_011147:2676972:268846726884672688976510Salmonella enterica subsp. enterica serovar Paratyphi A strphage regulatory protein4e-47187
NC_016845:4046142:405227840522784052787510Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,gp312e-47187
NC_020260:312805:319980319980320489510Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-47187
NC_014837:3766426:378110237811023781611510Pantoea sp. At-9b chromosome, complete genomeregulatory CII family protein1e-46185
NC_016860:2896254:289884428988442899353510Salmonella enterica subsp. enterica serovar Typhimurium strphage regulatory protein2e-46184
NC_011149:2802199:281827228182722818781510Salmonella enterica subsp. enterica serovar Agona str. SL483,phage regulatory protein2e-46184
NC_003197:2870268:287527828752782875787510Salmonella typhimurium LT2, complete genomehypothetical protein2e-46184
NC_006155:2116834:212213021221302122639510Yersinia pseudotuberculosis IP 32953, complete genomeregulatory protein CII bacteriophage 1866e-46183
NC_009436:1466580:147853314785331479042510Enterobacter sp. 638, complete genomephage regulatory CII family protein4e-46183
NC_015061:596247:612574612574613080507Rahnella sp. Y9602 chromosome, complete genomeregulatory protein CII bacteriophage 1866e-46182
NC_013282:3389619:340414834041483404657510Cronobacter turicensis, complete genomeRegulatory protein CII6e-46182
NC_020181:5182568:519431351943135194822510Enterobacter aerogenes EA1509E, complete genomeRegulatory protein CII7e-46182
NC_010694:614985:630293630293630802510Erwinia tasmaniensis, complete genomePhage regulatory protein8e-46182
NC_013956:3525711:354228535422853542794510Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-45181
NC_011742:2823000:282843128284312828940510Escherichia coli S88 chromosome, complete genomeregulatory protein cII5e-45180
NC_015061:2770856:277872327787232779232510Rahnella sp. Y9602 chromosome, complete genomeregulatory CII family protein7e-42169
NC_011147:2713937:271983927198392720369531Salmonella enterica subsp. enterica serovar Paratyphi A strphage protein3e-40164
NC_006511:2718401:272430327243032724833531Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene3e-40164
NC_012125:894955:921486921486921989504Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-39161
NC_011080:2870428:287551428755142876017504Salmonella enterica subsp. enterica serovar Newport str. SL254,regulatory protein CII bacteriophage 1864e-39160
NC_014562:2871765:287632228763222876831510Pantoea vagans C9-1 chromosome, complete genomeRegulatory protein CII2e-37155
NC_011205:2938356:295352829535282953974447Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-34145
NC_012947:2898179:2906082290608229075271446Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeregulatory CII family protein2e-32137
NC_015424:2726223:275689127568912757400510Aeromonas veronii B565 chromosome, complete genomephage protein2e-1995.1
NC_009348:4135002:415310241531024153635534Aeromonas salmonicida subsp. salmonicida A449, complete genomephage protein1e-1582.4
NC_009784:253852:267391267391267930540Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein1e-1582
NC_009348:1663870:166795316679531668474522Aeromonas salmonicida subsp. salmonicida A449, complete genomephage protein5e-1580.5
NC_016628:373815:386881386881387420540Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage regulatory protein (CII)2e-1478.6
NC_016745:1892500:189806918980691898605537Oceanimonas sp. GK1 chromosome, complete genomephage protein2e-0651.6