Pre_GI: BLASTP Hits

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Query: NC_012917:3565268:3575975 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3575975, End: 3576832, Length: 858

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014837:2458780:246975224697522470630879Pantoea sp. At-9b chromosome, complete genomeCI repressor1e-73276
NC_011601:846358:855128855128856051924Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein5e-40164
NC_014500:894136:9188619188619200541194Dickeya dadantii 3937 chromosome, complete genomeRepressor protein CI3e-38158
NC_020181:5182568:519547351954735196063591Enterobacter aerogenes EA1509E, complete genomeCI4e-38158
NC_016845:4046142:405102140510214051617597Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,CI repressor1e-37157
NC_009436:1466580:147758714775871478183597Enterobacter sp. 638, complete genomebacteriophage CI repressor1e-27123
NC_011742:2823000:282933728293372829969633Escherichia coli S88 chromosome, complete genomephage regulatory protein cI2e-27122
NC_016857:2871689:288686328868632887495633Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage repressor protein cI3e-27122
NC_013282:3389619:340505834050583405672615Cronobacter turicensis, complete genomePutative uncharacterized protein ORFI in retron EC675e-27121
NC_012947:2898179:290790729079072908476570Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeCI repressor1e-26120
NC_007613:761234:763483763483764052570Shigella boydii Sb227, complete genomerepressor protein1e-26120
NC_006155:2116834:212296221229622123573612Yersinia pseudotuberculosis IP 32953, complete genomeCI repressor of phage 186 and others3e-26119
NC_011601:846358:856102856102856671570Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein1e-25117
NC_016810:2871689:288692028869202887495576Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage repressor protein cI2e-24113
NC_015061:2770856:277962827796282780188561Rahnella sp. Y9602 chromosome, complete genomeCI repressor2e-24113
NC_020260:312805:318993318993319607615Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-24112
NC_013592:804288:821538821538822101564Dickeya dadantii Ech586, complete genomeCI repressor5e-24111
NC_006511:2677964:269383226938322694464633Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage repressor protein cI3e-23108
NC_003197:2870268:287617928761792876811633Salmonella typhimurium LT2, complete genomehypothetical protein3e-23108
NC_003198:4453457:450560945056094506241633Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage repressor protein cI3e-23108
NC_011147:2676972:268936826893682690000633Salmonella enterica subsp. enterica serovar Paratyphi A strphage repressor protein cI3e-23108
NC_016860:2896254:289974528997452900377633Salmonella enterica subsp. enterica serovar Typhimurium strphage repressor protein cI3e-23108
NC_014837:3766426:378197237819723782577606Pantoea sp. At-9b chromosome, complete genomeCI repressor4e-22105
NC_014306:1244721:124907312490731249669597Erwinia billingiae Eb661, complete genomeBacteriophage CI repressor3e-21102
NC_015061:596247:611561611561612151591Rahnella sp. Y9602 chromosome, complete genomeCI repressor2e-1996.3
NC_009784:253852:266342266342266968627Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein8e-1891.3
NC_020211:4598217:461422846142284614686459Serratia marcescens WW4, complete genomephage transcriptional regulator1e-1790.5
NC_009648:3803622:383337538333753833950576Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage repressor protein CI8e-1787.8
NC_012912:1701231:174072917407291741118390Dickeya zeae Ech1591, complete genome2e-1686.3
NC_009436:3807420:381287738128773813464588Enterobacter sp. 638, complete genomebacteriophage CI repressor7e-1581.3
NC_010694:614985:629291629291629869579Erwinia tasmaniensis, complete genomeBacteriophage 186 repressor protein CI6e-1271.6
NC_010334:1561691:159000615900061590695690Shewanella halifaxensis HAW-EB4, complete genomeCI repressor8e-0961.2
NC_012125:894955:920537920537920893357Salmonella enterica subsp. enterica serovar Paratyphi C strainrepressor protein1e-0757
NC_011205:2938356:295459429545942954998405Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage repressor protein cI2e-0756.6