Pre_GI: BLASTP Hits

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Query: NC_012917:3565268:3572087 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3572087, End: 3573025, Length: 939

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014307:1131241:115103111510311151984954Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein2e-69262
NC_009719:3532587:355664235566423557256615Parvibaculum lavamentivorans DS-1 chromosome, complete genometype 12 methyltransferase3e-0653.1