Pre_GI: BLASTP Hits

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Query: NC_012917:3565268:3568274 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3568274, End: 3569395, Length: 1122

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CP002185:2889656:2909880290988029110011122Escherichia coli W, complete genomefused chorismate mutase T/prephenate dehydrogenase0651
CU928160:2785792:2806014280601428071351122Escherichia coli IAI1 chromosome, complete genomefused chorismate mutase T ; prephenate dehydrogenase0650
NC_006905:2805877:2827581282758128287021122Salmonella enterica subsp. enterica serovar Choleraesuis strchorismate mutase T/prephenate dehydrogenase0645
NC_009648:3192483:3213116321311632142371122Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomebifunctional chorismate mutase/prephenate dehydrogenase0633
NC_009052:1394000:1395253139525313964041152Shewanella baltica OS155, complete genomechorismate mutase4e-121434
NC_009665:1495473:1497975149797514991261152Shewanella baltica OS185 chromosome, complete genomebifunctional chorismate mutase/prephenate dehydrogenase6e-121434
NC_016901:1527877:1529610152961015307491140Shewanella baltica OS678 chromosome, complete genomechorismate mutase2e-120432
NC_012913:626449:6504936504936516171125Aggregatibacter aphrophilus NJ8700, complete genomechorismate mutase/prephenate dehydrogenase1e-115416
NC_019977:253895:2571892571892584901302Methanomethylovorans hollandica DSM 15978, complete genomeprephenate dehydrogenase1e-25117
NC_008554:4586543:460957746095774610305729Syntrophobacter fumaroxidans MPOB, complete genomePrephenate dehydrogenase3e-25116
NC_007955:2074844:2098171209817120994841314Methanococcoides burtonii DSM 6242, complete genomePrephenate dehydrogenase6e-25115
NC_009515:616432:6196606196606209701311Methanobrevibacter smithii ATCC 35061, complete genomeprephenate dehydrogenase7e-1788.6
NC_013741:1304000:1307226130722613090851860Archaeoglobus profundus DSM 5631, complete genomeprephenate dehydratase2e-1273.9
NC_003106:2272313:2278892227889222799171026Sulfolobus tokodaii str. 7, complete genomehypothetical protein2e-0963.9
NC_015164:3431279:343127934312793432052774Bacteroides salanitronis DSM 18170 chromosome, complete genomePrephenate dehydrogenase2e-0860.8
NC_007181:141299:1467011467011477261026Sulfolobus acidocaldarius DSM 639, complete genomechorismate mutase/prephenate dehydrogenase5e-0858.9
NC_015518:1095879:1107012110701211080641053Acidianus hospitalis W1 chromosome, complete genomechorismate mutase3e-0756.6